RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 ATP2B2Q01814 1243 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 SPAG1Q07617 926 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 ANKRD40Q6AI12 368 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 TMCO3Q6UWJ1 677 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 KRT25Q7Z3Z0 450 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 GIMAP8Q8ND71 665 aaPredicted RBP12.92□□□□□ -0.34
C11orf54-214ENST00000540113 PARD6BQ9BYG5 372 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 ZC3H12CQ9C0D7 883 aaKnown RBP12.92□□□□□ -0.34
C11orf54-214ENST00000540113 SUGT1Q9Y2Z0 365 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 SLC37A4O43826 429 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 RHOBTB3O94955 611 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 SMARCA1P28370 1054 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 SLC16A2P36021 539 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 ARHGAP25P42331 645 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 PLA2G4AP47712 749 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 BMS1Q14692 1282 aaKnown RBP12.91□□□□□ -0.34
C11orf54-214ENST00000540113 UBE2SQ16763 222 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 TTBK2Q6IQ55 1244 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 TTI2Q6NXR4 508 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 RSRC2Q7L4I2 434 aaKnown RBP12.91□□□□□ -0.34
C11orf54-214ENST00000540113 CSGALNACT2Q8N6G5 542 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 TRIM9Q9C026 710 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 RIOX1Q9H6W3 641 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 SLC39A2Q9NP94 309 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 USP40Q9NVE5 1235 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 REXO2Q9Y3B8 237 aaKnown RBP12.91□□□□□ -0.34
C11orf54-214ENST00000540113 EDIL3O43854 480 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 RAD21O60216 631 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 MMP10P09238 476 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 SHMT1P34896 483 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 CDC42EP5Q6NZY7 148 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 CYP26C1Q6V0L0 522 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 ZNF771Q7L3S4 317 aaPredicted RBP12.91□□□□□ -0.34
C11orf54-214ENST00000540113 DYMQ7RTS9 669 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 TMTC1Q8IUR5 882 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 REXO1Q8N1G1 1221 aaKnown RBP12.91□□□□□ -0.34
C11orf54-214ENST00000540113 NUDT12Q9BQG2 462 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 GTPBP4Q9BZE4 634 aaKnown RBP12.91□□□□□ -0.34
C11orf54-214ENST00000540113 KCNQ5Q9NR82 932 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 AGPAT5Q9NUQ2 364 aa12.91□□□□□ -0.34
C11orf54-214ENST00000540113 SCN9AQ15858 1988 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 POTEMA6NI47 508 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 PSMA7O14818 248 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 SASH3O75995 380 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 ZRANB2O95218 330 aaKnown RBP eCLIP12.9□□□□□ -0.34
C11orf54-214ENST00000540113 SNHG28P0DPA3 235 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 GNA11P29992 359 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 PRPHP41219 470 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 MCM6Q14566 821 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 KCNB1Q14721 858 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 SHROOM1Q2M3G4 852 aaPredicted RBP12.9□□□□□ -0.34
C11orf54-214ENST00000540113 APOBEC3HQ6NTF7 200 aaKnown RBP12.9□□□□□ -0.34
C11orf54-214ENST00000540113 PKNOX2Q96KN3 472 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 EXOC1Q9NV70 894 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 GUCA1BQ9UMX6 200 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 MYH4Q9Y623 1939 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 TNS1Q9HBL0 1735 aaKnown RBP12.9□□□□□ -0.34
C11orf54-214ENST00000540113 RGPD3A6NKT7 1758 aaPredicted RBP12.9□□□□□ -0.34
C11orf54-214ENST00000540113 RGPD4Q7Z3J3 1758 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 FAM196BA6NMK8 535 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 LGALS16A8MUM7 142 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 NFIAQ12857 509 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 STIM1Q13586 685 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 MSL1Q68DK7 614 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 ZNF507Q8TCN5 953 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 CCDC51Q96ER9 411 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 TUBGCP2Q9BSJ2 902 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 ARGLU1Q9NWB6 273 aaPredicted RBP12.9□□□□□ -0.34
C11orf54-214ENST00000540113 MAGEC2Q9UBF1 373 aaPredicted RBP12.9□□□□□ -0.34
C11orf54-214ENST00000540113 PCDHAC2Q9Y5I4 1007 aa12.9□□□□□ -0.34
C11orf54-214ENST00000540113 RASSF10A6NK89 507 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 LAD1O00515 517 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 ENC1O14682 589 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 FECHP22830 423 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 TNNI2P48788 182 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 CHMP4BP1P59074 171 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 GRB10Q13322 594 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 UTP14CQ5TAP6 766 aaKnown RBP12.89□□□□□ -0.35
C11orf54-214ENST00000540113 WDR59Q6PJI9 974 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 ZFPM1Q8IX07 1006 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 KIAA0895Q8NCT3 520 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 GOLGA1Q92805 767 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 P2RX5Q93086 422 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 PCMTD1Q96MG8 357 aaPredicted RBP12.89□□□□□ -0.35
C11orf54-214ENST00000540113 SERPINB13Q9UIV8 391 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 ESYT2A0FGR8 921 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 MPHOSPH10O00566 681 aaKnown RBP12.89□□□□□ -0.35
C11orf54-214ENST00000540113 POLR3GO15318 223 aaPredicted RBP12.89□□□□□ -0.35
C11orf54-214ENST00000540113 PPP1R11O60927 126 aaPredicted RBP12.89□□□□□ -0.35
C11orf54-214ENST00000540113 PDE6BP35913 854 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 CACNB3P54284 484 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 CALCRLQ16602 461 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 CC2D1AQ6P1N0 951 aaPredicted RBP12.89□□□□□ -0.35
C11orf54-214ENST00000540113 KCTD1Q719H9 257 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 GPR161Q8N6U8 529 aaKnown RBP12.89□□□□□ -0.35
C11orf54-214ENST00000540113 GLIS3Q8NEA6 775 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 MASTLQ96GX5 879 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 CNOT6LQ96LI5 555 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms