RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 MICU3Q86XE3 530 aa20.09■□□□□ 0.81
GPN3-202ENST00000537466 SRBD1Q8N5C6 995 aaKnown RBP20.09■□□□□ 0.81
GPN3-202ENST00000537466 MORC4Q8TE76 937 aa20.09■□□□□ 0.81
GPN3-202ENST00000537466 XPNPEP3Q9NQH7 507 aa20.09■□□□□ 0.81
GPN3-202ENST00000537466 ADD3Q9UEY8 706 aaKnown RBP20.09■□□□□ 0.81
GPN3-202ENST00000537466 FAM184BQ9ULE4 1060 aa20.09■□□□□ 0.81
GPN3-202ENST00000537466 PCDHA1Q9Y5I3 950 aa20.09■□□□□ 0.81
GPN3-202ENST00000537466 PNMA6FA0A0J9YX94 578 aa20.08■□□□□ 0.81
GPN3-202ENST00000537466 DNM1LO00429 736 aa20.08■□□□□ 0.81
GPN3-202ENST00000537466 PGK1P00558 417 aa20.08■□□□□ 0.81
GPN3-202ENST00000537466 MYCNP04198 464 aaPredicted RBP20.08■□□□□ 0.81
GPN3-202ENST00000537466 LRRC41Q15345 812 aa20.08■□□□□ 0.81
GPN3-202ENST00000537466 EEPD1Q7L9B9 569 aa20.08■□□□□ 0.81
GPN3-202ENST00000537466 FANCBQ8NB91 859 aa20.08■□□□□ 0.81
GPN3-202ENST00000537466 SPZ1Q9BXG8 430 aa20.08■□□□□ 0.81
GPN3-202ENST00000537466 COL20A1Q9P218 1284 aa20.08■□□□□ 0.81
GPN3-202ENST00000537466 BLOC1S2Q6QNY1 142 aa20.07■□□□□ 0.8
GPN3-202ENST00000537466 FBXO16Q8IX29 292 aaPredicted RBP20.07■□□□□ 0.8
GPN3-202ENST00000537466 ARRDC4Q8NCT1 418 aa20.07■□□□□ 0.8
GPN3-202ENST00000537466 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.06■□□□□ 0.8
GPN3-202ENST00000537466 SMARCA1P28370 1054 aa20.06■□□□□ 0.8
GPN3-202ENST00000537466 PRPF38BQ5VTL8 546 aaKnown RBP20.06■□□□□ 0.8
GPN3-202ENST00000537466 Q6ZUG5 572 aa20.06■□□□□ 0.8
GPN3-202ENST00000537466 MCF2L2Q86YR7 1114 aa20.06■□□□□ 0.8
GPN3-202ENST00000537466 SYTL5Q8TDW5 730 aaPredicted RBP20.06■□□□□ 0.8
GPN3-202ENST00000537466 TAAR1Q96RJ0 339 aa20.06■□□□□ 0.8
GPN3-202ENST00000537466 SENP6Q9GZR1 1112 aaPredicted RBP20.06■□□□□ 0.8
GPN3-202ENST00000537466 PDGFCQ9NRA1 345 aa20.06■□□□□ 0.8
GPN3-202ENST00000537466 SYNRGQ9UMZ2 1314 aa20.06■□□□□ 0.8
GPN3-202ENST00000537466 KLF18A0A0U1RQI7 1052 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 ADAMTS4O75173 837 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 CFBP00751 764 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 CASTP20810 708 aaKnown RBP20.05■□□□□ 0.8
GPN3-202ENST00000537466 RPS6KB1P23443 525 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 ADCYAP1R1P41586 468 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 GNAQP50148 359 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 IRX5P78411 483 aaPredicted RBP20.05■□□□□ 0.8
GPN3-202ENST00000537466 TAPT1Q6NXT6 567 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 SYNE3Q6ZMZ3 975 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 TMTC3Q6ZXV5 915 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 DNERQ8NFT8 737 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 LZTS2Q9BRK4 669 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 MAF1Q9H063 256 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 LOC102724159A0A0B4J2E5 919 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 KBTBD13C9JR72 458 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 ZBTB43O43298 467 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 DUSP11O75319 330 aaKnown RBP20.05■□□□□ 0.8
GPN3-202ENST00000537466 PTGS1P23219 599 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 EDNRBP24530 442 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 HSD17B4P51659 736 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 PWP2Q15269 919 aaKnown RBP20.05■□□□□ 0.8
GPN3-202ENST00000537466 TMEM63BQ5T3F8 832 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 CCDC82Q8N4S0 544 aa20.05■□□□□ 0.8
GPN3-202ENST00000537466 RRP36Q96EU6 259 aaKnown RBP20.05■□□□□ 0.8
GPN3-202ENST00000537466 hCG_1642624A0A1W2PR95 340 aa20.04■□□□□ 0.8
GPN3-202ENST00000537466 MYADML2A6NDP7 307 aa20.04■□□□□ 0.8
GPN3-202ENST00000537466 PSMA5P28066 241 aa20.04■□□□□ 0.8
GPN3-202ENST00000537466 FGD1P98174 961 aa20.04■□□□□ 0.8
GPN3-202ENST00000537466 GHRHRQ02643 423 aa20.04■□□□□ 0.8
GPN3-202ENST00000537466 APOBRQ0VD83 1088 aa20.04■□□□□ 0.8
GPN3-202ENST00000537466 LRRC26Q2I0M4 334 aa20.04■□□□□ 0.8
GPN3-202ENST00000537466 BRF1Q92994 677 aa20.04■□□□□ 0.8
GPN3-202ENST00000537466 VTA1Q9NP79 307 aa20.04■□□□□ 0.8
GPN3-202ENST00000537466 H0YGN5 161 aa20.03■□□□□ 0.8
GPN3-202ENST00000537466 EVI5O60447 810 aa20.03■□□□□ 0.8
GPN3-202ENST00000537466 SMPD1P17405 629 aa20.03■□□□□ 0.8
GPN3-202ENST00000537466 HOXA13P31271 388 aaPredicted RBP20.03■□□□□ 0.8
GPN3-202ENST00000537466 TNFAIP2Q03169 654 aa20.03■□□□□ 0.8
GPN3-202ENST00000537466 RNF180Q86T96 592 aa20.03■□□□□ 0.8
GPN3-202ENST00000537466 CEP290O15078 2479 aa20.03■□□□□ 0.8
GPN3-202ENST00000537466 CNTNAP5Q8WYK1 1306 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 GOLGA8AA7E2F4 631 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 GOLGA8BA8MQT2 603 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 ATN1P54259 1190 aaPredicted RBP20.02■□□□□ 0.8
GPN3-202ENST00000537466 PDE4DQ08499 809 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 TRAF1Q13077 416 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 RTN1Q16799 776 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 RUFY3Q7L099 469 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 FBXL16Q8N461 479 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 KLHDC9Q8NEP7 349 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 FERMT2Q96AC1 680 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 RMDN3Q96TC7 470 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 AGXT2Q9BYV1 514 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 UPF3AQ9H1J1 476 aaKnown RBP20.02■□□□□ 0.8
GPN3-202ENST00000537466 ZSWIM6Q9HCJ5 1215 aa20.02■□□□□ 0.8
GPN3-202ENST00000537466 FAM217BQ9NTX9 383 aaPredicted RBP20.02■□□□□ 0.8
GPN3-202ENST00000537466 RBM28Q9NW13 759 aaKnown RBP20.02■□□□□ 0.8
GPN3-202ENST00000537466 SEC63Q9UGP8 760 aaKnown RBP20.02■□□□□ 0.8
GPN3-202ENST00000537466 NAP1L2Q9ULW6 460 aaPredicted RBP20.02■□□□□ 0.8
GPN3-202ENST00000537466 GNEQ9Y223 722 aaKnown RBP20.02■□□□□ 0.8
GPN3-202ENST00000537466 CDC27P30260 824 aa20.01■□□□□ 0.79
GPN3-202ENST00000537466 GJA9P57773 515 aa20.01■□□□□ 0.79
GPN3-202ENST00000537466 CCSAPQ6IQ19 270 aaPredicted RBP20.01■□□□□ 0.79
GPN3-202ENST00000537466 C7orf61Q8IZ16 206 aa20.01■□□□□ 0.79
GPN3-202ENST00000537466 NSUN6Q8TEA1 469 aaKnown RBP20.01■□□□□ 0.79
GPN3-202ENST00000537466 MPHOSPH6Q99547 160 aaKnown RBP20.01■□□□□ 0.79
GPN3-202ENST00000537466 PHF24Q9UPV7 400 aa20.01■□□□□ 0.79
GPN3-202ENST00000537466 MYH7BA7E2Y1 1941 aa20.01■□□□□ 0.79
GPN3-202ENST00000537466 CTAGE5O15320 804 aa20■□□□□ 0.79
GPN3-202ENST00000537466 SEC24BO95487 1268 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms