RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, human

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD4-205	ENST00000536301	RLBP1	P12271	317 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	ACTN1	P12814	892 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	IRS1	P35568	1242 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	ERVK-21	P61565	698 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	ZP2	Q05996	745 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	CSPP1	Q1MSJ5	1256 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	KIAA1211	Q6ZU35	1233 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	CHST13	Q8NET6	341 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	NEK9	Q8TD19	979 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	DHX38	Q92620	1227 aa	Known RBP	6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	BCL11A	Q9H165	835 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	ACAD9	Q9H845	621 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	ALG13	Q9NP73	1137 aa	Known RBP	6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	ATP8A2	Q9NTI2	1148 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	FAM86C1	Q9NVL1	165 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	NYAP2	Q9P242	653 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	CLIP2	Q9UDT6	1046 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	SLC4A4	Q9Y6R1	1079 aa		6.27	□□□□□ -1.41
CHD4-205	ENST00000536301	CACNA1B	Q00975	2339 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	C19orf67	A6NJJ6	358 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	KIF28P	B7ZC32	967 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	TMEM232	C9JQI7	657 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	ZEB2	O60315	1214 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	NBN	O60934	754 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	PRDM1	O75626	825 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	CT47B1	P0C2W7	299 aa	Predicted RBP	6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	ALAS1	P13196	640 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	ALAD	P13716	330 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	DUSP28	Q4G0W2	176 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	IQSEC1	Q6DN90	963 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	CEP85	Q6P2H3	762 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	6.26	□□□□□ -1.41	5e-11	■■■■■ 32.8
CHD4-205	ENST00000536301	OR6J1	Q8NGC5	347 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	WNT8B	Q93098	351 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	CEP95	Q96GE4	821 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	TGS1	Q96RS0	853 aa	Known RBP	6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	MTG1	Q9BT17	334 aa	Predicted RBP	6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	PUS7L	Q9H0K6	701 aa	Known RBP	6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	BOLA2	Q9H3K6	86 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	CYP39A1	Q9NYL5	469 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	LMCD1	Q9NZU5	365 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	FBXO40	Q9UH90	709 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	MUTYH	Q9UIF7	546 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	COG6	Q9Y2V7	657 aa		6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	CTDP1	Q9Y5B0	961 aa	Predicted RBP	6.26	□□□□□ -1.41
CHD4-205	ENST00000536301	VPS13A	Q96RL7	3174 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	MYH7B	A7E2Y1	1941 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	ASB14	A6NK59	587 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	PITPNM1	O00562	1244 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	RGS20	O76081	388 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	ARIH2	O95376	493 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	GJB5	O95377	273 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	SUPT20HL2	P0C7V6	817 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	RFC2	P35250	354 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	LTBR	P36941	435 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	KCNJ6	P48051	423 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	OAZ1	P54368	228 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	CHMP4BP1	P59074	171 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	DLX2	Q07687	328 aa	Predicted RBP	6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	TCF15	Q12870	199 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	MBTPS1	Q14703	1052 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	TTF1	Q15361	905 aa	Predicted RBP	6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	CLUL1	Q15846	466 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	TCEAL5	Q5H9L2	206 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	SLFN13	Q68D06	897 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	GDF6	Q6KF10	455 aa	Predicted RBP	6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	TMED8	Q6PL24	325 aa	Predicted RBP	6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	TRAF7	Q6Q0C0	670 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	NSMF	Q6X4W1	530 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	EP400NL	Q6ZTU2	488 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	RETREG2	Q8NC44	543 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	RHPN1	Q8TCX5	695 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	MORC4	Q8TE76	937 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	TRERF1	Q96PN7	1200 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	ZBED2	Q9BTP6	218 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	OSBPL7	Q9BZF2	842 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	WDR11	Q9BZH6	1224 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	VTA1	Q9NP79	307 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	POLR3E	Q9NVU0	708 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	PAG1	Q9NWQ8	432 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	FEM1B	Q9UK73	627 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	ISY1	Q9ULR0	285 aa	Known RBP	6.25	□□□□□ -1.41
CHD4-205	ENST00000536301		Q9Y3F1	56 aa		6.25	□□□□□ -1.41
CHD4-205	ENST00000536301	MYO10	Q9HD67	2058 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	GVINP1	Q7Z2Y8	2422 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	RBM47	A0AV96	593 aa	Known RBP	6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	GSG1L2	A8MUP6	293 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	MINDY4B	A8MYZ0	360 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	NFIB	O00712	420 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	BAIAP3	O94812	1187 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	CXCL10	P02778	98 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	BMP3	P12645	472 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	GTF2F1	P35269	517 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	ALDH5A1	P51649	535 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	BAAT	Q14032	418 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	HIC1	Q14526	733 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	SLC30A10	Q6XR72	485 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	KCTD1	Q719H9	257 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	LRRC8D	Q7L1W4	858 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms