RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SMARCA5O60264 1052 aaPredicted RBP1.78□□□□□ -2.12
COPB1-212ENST00000534771 BRD1O95696 1058 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 TBC1D8O95759 1140 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 P4HBP07237 508 aaKnown RBP1.78□□□□□ -2.12
COPB1-212ENST00000534771 ASGR2P07307 311 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 GSTM1P09488 218 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 FBLP22087 321 aaKnown RBP1.78□□□□□ -2.12
COPB1-212ENST00000534771 GBP2P32456 591 aaPredicted RBP1.78□□□□□ -2.12
COPB1-212ENST00000534771 CCNFP41002 786 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 MC3RP41968 323 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 CTSKP43235 329 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 ST13P50502 369 aaKnown RBP1.78□□□□□ -2.12
COPB1-212ENST00000534771 RGL3Q3MIN7 710 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 SPDYAQ5MJ70 313 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 MICALCLQ6ZW33 695 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 FAM124AQ86V42 546 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 LGI4Q8N135 537 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 NAT16Q8N8M0 369 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 GOLM1Q8NBJ4 401 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 SMARCC2Q8TAQ2 1214 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 ADAMTS17Q8TE56 1095 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 ALG3Q92685 438 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 ZNF512BQ96KM6 892 aaPredicted RBP1.78□□□□□ -2.12
COPB1-212ENST00000534771 RSRP1Q9BUV0 290 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 SSBP3Q9BWW4 388 aaPredicted RBP1.78□□□□□ -2.12
COPB1-212ENST00000534771 SPATA6Q9NWH7 488 aaPredicted RBP1.78□□□□□ -2.12
COPB1-212ENST00000534771 GFOD1Q9NXC2 390 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 GMIPQ9P107 970 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 PLA2G2DQ9UNK4 145 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 PCDHB12Q9Y5F1 795 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 ROBO2Q9HCK4 1378 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 MROH6A6NGR9 719 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 ZNF202O95125 648 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 ATE1O95260 518 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 GSNP06396 782 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 PMLP29590 882 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 CORO7P57737 925 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 FAM160A1Q05DH4 1040 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 PWP1Q13610 501 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 AUHQ13825 339 aaKnown RBP1.77□□□□□ -2.13
COPB1-212ENST00000534771 ICAM4Q14773 271 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 SURF1Q15526 300 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 CWF19L2Q2TBE0 894 aaKnown RBP1.77□□□□□ -2.13
COPB1-212ENST00000534771 RTP2Q5QGT7 225 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 SNAP47Q5SQN1 464 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 CWF19L1Q69YN2 538 aaKnown RBP1.77□□□□□ -2.13
COPB1-212ENST00000534771 ZNF585AQ6P3V2 769 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 BORAQ6PGQ7 559 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 REC114Q7Z4M0 266 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 B3GNT8Q7Z7M8 397 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 FBXO27Q8NI29 283 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 ZBTB8AQ96BR9 441 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 ATG4CQ96DT6 458 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 TMEM74Q96NL1 305 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 NOX5Q96PH1 765 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 AGAP2Q99490 1192 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 DUSP9Q99956 384 aaKnown RBP1.77□□□□□ -2.13
COPB1-212ENST00000534771 DSCC1Q9BVC3 393 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 SLC12A9Q9BXP2 914 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 MKRN2Q9H000 416 aaKnown RBP1.77□□□□□ -2.13
COPB1-212ENST00000534771 DEF6Q9H4E7 631 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 CNNM2Q9H8M5 875 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 RNF19AQ9NV58 838 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 PRR13Q9NZ81 148 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 INVSQ9Y283 1065 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 PCDHB14Q9Y5E9 798 aa1.77□□□□□ -2.13
COPB1-212ENST00000534771 NPEPPSL1A6NEC2 478 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 ERVV-2B6SEH9 535 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 TLR3O15455 904 aaKnown RBP1.76□□□□□ -2.13
COPB1-212ENST00000534771 FGF10O15520 208 aaPredicted RBP1.76□□□□□ -2.13
COPB1-212ENST00000534771 ZBTB7AO95365 584 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 TACR1P25103 407 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 POLR2BP30876 1174 aaKnown RBP1.76□□□□□ -2.13
COPB1-212ENST00000534771 L1CAMP32004 1257 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 DAB2P98082 770 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 CACNB2Q08289 660 aaPredicted RBP1.76□□□□□ -2.13
COPB1-212ENST00000534771 FOXE3Q13461 319 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 SMAD4Q13485 552 aaKnown RBP1.76□□□□□ -2.13
COPB1-212ENST00000534771 SLC9A5Q14940 896 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 FAM26FQ5R3K3 315 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 NOL9Q5SY16 702 aaKnown RBP1.76□□□□□ -2.13
COPB1-212ENST00000534771 MCTP2Q6DN12 878 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 CRTC3Q6UUV7 619 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 CYP2R1Q6VVX0 501 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 FAM196AQ6ZSG2 479 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 CABP7Q86V35 215 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 TMEM192Q8IY95 271 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 LINC00482Q8N8I6 264 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 NEU4Q8WWR8 484 aaPredicted RBP1.76□□□□□ -2.13
COPB1-212ENST00000534771 CPA5Q8WXQ8 436 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 TSPAN17Q96FV3 270 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 PEX11GQ96HA9 241 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 RHOVQ96L33 236 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 SEMA4AQ9H3S1 761 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 BCAS3Q9H6U6 928 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 PCDH18Q9HCL0 1135 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 BRMS1Q9HCU9 246 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 ADARB2Q9NS39 739 aaKnown RBP1.76□□□□□ -2.13
COPB1-212ENST00000534771 PARP2Q9UGN5 583 aa1.76□□□□□ -2.13
COPB1-212ENST00000534771 NUDT5Q9UKK9 219 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms