RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SEZ6LQ9BYH1 1024 aa15.44■□□□□ 0.06
COPB1-209ENST00000533096 TOMM22Q9NS69 142 aa15.44■□□□□ 0.06
COPB1-209ENST00000533096 SYNPO2Q9UMS6 1093 aa15.44■□□□□ 0.06
COPB1-209ENST00000533096 PRUNE2Q8WUY3 3088 aa15.44■□□□□ 0.06
COPB1-209ENST00000533096 TNKSO95271 1327 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 ACTN1P12814 892 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 CALML3P27482 149 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 NBPF20Q3BBV1 942 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 DUSP28Q4G0W2 176 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 OR6J1Q8NGC5 347 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 FSD1Q9BTV5 496 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 EPHX3Q9H6B9 360 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 VTA1Q9NP79 307 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 GPCPD1Q9NPB8 672 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 IL17RBQ9NRM6 502 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 POLR3EQ9NVU0 708 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 MTCH2Q9Y6C9 303 aa15.43■□□□□ 0.06
COPB1-209ENST00000533096 ZNFX1Q9P2E3 1918 aaKnown RBP15.43■□□□□ 0.06
COPB1-209ENST00000533096 MTG1Q9BT17 334 aaPredicted RBP15.42■□□□□ 0.06
COPB1-209ENST00000533096 C1QTNF1Q9BXJ1 281 aa15.42■□□□□ 0.06
COPB1-209ENST00000533096 ADD3Q9UEY8 706 aaKnown RBP15.42■□□□□ 0.06
COPB1-209ENST00000533096 NOD1Q9Y239 953 aa15.42■□□□□ 0.06
COPB1-209ENST00000533096 EPOPA6NHQ4 379 aa15.41■□□□□ 0.06
COPB1-209ENST00000533096 KIF28PB7ZC32 967 aa15.41■□□□□ 0.06
COPB1-209ENST00000533096 NFIBO00712 420 aa15.41■□□□□ 0.06
COPB1-209ENST00000533096 PLA2G6O60733 806 aa15.41■□□□□ 0.06
COPB1-209ENST00000533096 ICAM1P05362 532 aa15.41■□□□□ 0.06
COPB1-209ENST00000533096 CPT1AP50416 773 aa15.41■□□□□ 0.06
COPB1-209ENST00000533096 PURAQ00577 322 aaKnown RBP15.41■□□□□ 0.06
COPB1-209ENST00000533096 PDE4DQ08499 809 aa15.41■□□□□ 0.06
COPB1-209ENST00000533096 BRDTQ58F21 947 aaPredicted RBP15.41■□□□□ 0.06
COPB1-209ENST00000533096 RRP12Q5JTH9 1297 aaKnown RBP15.41■□□□□ 0.06
COPB1-209ENST00000533096 COPS5Q92905 334 aa15.41■□□□□ 0.06
COPB1-209ENST00000533096 DCTPP1Q9H773 170 aa15.41■□□□□ 0.06
COPB1-209ENST00000533096 RCAN3Q9UKA8 241 aa15.41■□□□□ 0.06
COPB1-209ENST00000533096 BAZ2AQ9UIF9 1905 aaKnown RBP15.41■□□□□ 0.06
COPB1-209ENST00000533096 FRMPD2Q68DX3 1309 aaPredicted RBP15.41■□□□□ 0.06
COPB1-209ENST00000533096 ERC2O15083 957 aa15.4■□□□□ 0.06
COPB1-209ENST00000533096 PLA2G5P39877 138 aa15.4■□□□□ 0.06
COPB1-209ENST00000533096 ALDH5A1P51649 535 aaPredicted RBP15.4■□□□□ 0.06
COPB1-209ENST00000533096 PPP4R3BQ5MIZ7 849 aa15.4■□□□□ 0.06
COPB1-209ENST00000533096 ZBED2Q9BTP6 218 aa15.4■□□□□ 0.06
COPB1-209ENST00000533096 COL11A1P12107 1806 aaPredicted RBP15.4■□□□□ 0.06
COPB1-209ENST00000533096 SPTBN5Q9NRC6 3674 aaKnown RBP15.4■□□□□ 0.06
COPB1-209ENST00000533096 ARHGEF15O94989 841 aa15.39■□□□□ 0.05
COPB1-209ENST00000533096 PFKMP08237 780 aa15.39■□□□□ 0.05
COPB1-209ENST00000533096 IQCF3P0C7M6 154 aa15.39■□□□□ 0.05
COPB1-209ENST00000533096 TAP1Q03518 808 aa15.39■□□□□ 0.05
COPB1-209ENST00000533096 SYDE2Q5VT97 1194 aa15.39■□□□□ 0.05
COPB1-209ENST00000533096 RNF207Q6ZRF8 634 aa15.39■□□□□ 0.05
COPB1-209ENST00000533096 TMCO2Q7Z6W1 182 aaPredicted RBP15.39■□□□□ 0.05
COPB1-209ENST00000533096 HERC6Q8IVU3 1022 aa15.39■□□□□ 0.05
COPB1-209ENST00000533096 OTUD7AQ8TE49 926 aaPredicted RBP15.39■□□□□ 0.05
COPB1-209ENST00000533096 HLA-CQ95604 372 aa15.39■□□□□ 0.05
COPB1-209ENST00000533096 RBAK-RBAKDNI3L0D1 243 aa15.38■□□□□ 0.05
COPB1-209ENST00000533096 TLL1O43897 1013 aa15.38■□□□□ 0.05
COPB1-209ENST00000533096 TXNP10599 105 aaKnown RBP15.38■□□□□ 0.05
COPB1-209ENST00000533096 ZMYM1Q5SVZ6 1142 aa15.38■□□□□ 0.05
COPB1-209ENST00000533096 SPRED2Q7Z698 418 aa15.38■□□□□ 0.05
COPB1-209ENST00000533096 PHOSPHO2Q8TCD6 241 aa15.38■□□□□ 0.05
COPB1-209ENST00000533096 MORC4Q8TE76 937 aa15.38■□□□□ 0.05
COPB1-209ENST00000533096 DCAF4Q8WV16 495 aa15.38■□□□□ 0.05
COPB1-209ENST00000533096 CDH23Q9H251 3354 aa15.38■□□□□ 0.05
COPB1-209ENST00000533096 GRB10Q13322 594 aa15.37■□□□□ 0.05
COPB1-209ENST00000533096 BFSP2Q13515 415 aa15.37■□□□□ 0.05
COPB1-209ENST00000533096 PPP2R5BQ15173 497 aa15.37■□□□□ 0.05
COPB1-209ENST00000533096 PTGISQ16647 500 aa15.37■□□□□ 0.05
COPB1-209ENST00000533096 VPS53Q5VIR6 699 aa15.37■□□□□ 0.05
COPB1-209ENST00000533096 SLC30A10Q6XR72 485 aa15.37■□□□□ 0.05
COPB1-209ENST00000533096 CHST3Q7LGC8 479 aa15.37■□□□□ 0.05
COPB1-209ENST00000533096 SLC9A7Q96T83 725 aa15.37■□□□□ 0.05
COPB1-209ENST00000533096 LRFN3Q9BTN0 628 aa15.37■□□□□ 0.05
COPB1-209ENST00000533096 RANBP17Q9H2T7 1088 aaKnown RBP15.37■□□□□ 0.05
COPB1-209ENST00000533096 MTUS1Q9ULD2 1270 aa15.37■□□□□ 0.05
COPB1-209ENST00000533096 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.37■□□□□ 0.056e-6■■□□□ 13.9
COPB1-209ENST00000533096 PLXNA1Q9UIW2 1896 aa15.37■□□□□ 0.05
COPB1-209ENST00000533096 TTC28Q96AY4 2481 aa15.36■□□□□ 0.05
COPB1-209ENST00000533096 RBM47A0AV96 593 aaKnown RBP15.36■□□□□ 0.05
COPB1-209ENST00000533096 KPNA6O60684 536 aa15.36■□□□□ 0.05
COPB1-209ENST00000533096 POU3F3P20264 500 aaPredicted RBP15.36■□□□□ 0.05
COPB1-209ENST00000533096 RFC2P35250 354 aa15.36■□□□□ 0.05
COPB1-209ENST00000533096 KCNJ6P48051 423 aa15.36■□□□□ 0.05
COPB1-209ENST00000533096 SCFD2Q8WU76 684 aa15.36■□□□□ 0.05
COPB1-209ENST00000533096 CLEC4DQ8WXI8 215 aa15.36■□□□□ 0.05
COPB1-209ENST00000533096 MPHOSPH6Q99547 160 aaKnown RBP15.36■□□□□ 0.05
COPB1-209ENST00000533096 TMEM47Q9BQJ4 181 aa15.36■□□□□ 0.05
COPB1-209ENST00000533096 COG5Q9UP83 839 aa15.36■□□□□ 0.05
COPB1-209ENST00000533096 LCHNA4D1U4 455 aa15.35■□□□□ 0.05
COPB1-209ENST00000533096 TOP1P11387 765 aaKnown RBP15.35■□□□□ 0.05
COPB1-209ENST00000533096 RPS6P62753 249 aaKnown RBP15.35■□□□□ 0.05
COPB1-209ENST00000533096 USH1GQ495M9 461 aa15.35■□□□□ 0.05
COPB1-209ENST00000533096 FAM117BQ6P1L5 589 aa15.35■□□□□ 0.05
COPB1-209ENST00000533096 NFRKBQ6P4R8 1299 aa15.35■□□□□ 0.05
COPB1-209ENST00000533096 SEPT14Q6ZU15 432 aa15.35■□□□□ 0.05
COPB1-209ENST00000533096 RAD50Q92878 1312 aa15.35■□□□□ 0.05
COPB1-209ENST00000533096 PLIN4Q96Q06 1357 aa15.35■□□□□ 0.05
COPB1-209ENST00000533096 FAM86C2PA6NEL3 165 aa15.34■□□□□ 0.05
COPB1-209ENST00000533096 A6NJR5 290 aa15.34■□□□□ 0.05
COPB1-209ENST00000533096 FOXP2O15409 715 aa15.34■□□□□ 0.05
COPB1-209ENST00000533096 LY6KQ17RY6 165 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms