RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 VAC14Q08AM6 782 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 SEMA3FQ13275 785 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 UBAP2LQ14157 1087 aaKnown RBP6.73□□□□□ -1.33
CHKA-204ENST00000528235 AAK1Q2M2I8 961 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 DZIP1Q86YF9 867 aaKnown RBP6.73□□□□□ -1.33
CHKA-204ENST00000528235 VGLL2Q8N8G2 317 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 USP6NLQ92738 828 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 SUCLG2Q96I99 432 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 SPOCK3Q9BQ16 436 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 LRFN3Q9BTN0 628 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 SRCIN1Q9C0H9 1055 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 PORCNQ9H237 461 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 PRDM12Q9H4Q4 367 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 TXNRD2Q9NNW7 524 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 RBPJLQ9UBG7 517 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 MUC6Q6W4X9 2439 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 SIPA1L1O43166 1804 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 MYO5AQ9Y4I1 1855 aaKnown RBP6.73□□□□□ -1.33
CHKA-204ENST00000528235 COL11A1P12107 1806 aaPredicted RBP6.72□□□□□ -1.33
CHKA-204ENST00000528235 TRIM43BA6NCK2 446 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 C19orf81C9J6K1 198 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 CLTBP09497 229 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 AMPD1P23109 780 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 SOX11P35716 441 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 CAP2P40123 477 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 ADCYAP1R1P41586 468 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 BTDP43251 543 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 PLA2G4AP47712 749 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 GDF10P55107 478 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 BACE1P56817 501 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 SNRPNP63162 240 aaKnown RBP6.72□□□□□ -1.33
CHKA-204ENST00000528235 SETQ01105 290 aaPredicted RBP6.72□□□□□ -1.33
CHKA-204ENST00000528235 TLE2Q04725 743 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 TMEM31Q5JXX7 168 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 ANO1Q5XXA6 986 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 LPIN2Q92539 896 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 FERMT2Q96AC1 680 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 TRIM43Q96BQ3 446 aaPredicted RBP6.72□□□□□ -1.33
CHKA-204ENST00000528235 ABHD17AQ96GS6 310 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 CCDC136Q96JN2 1154 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 NECAB3Q96P71 396 aaPredicted RBP6.72□□□□□ -1.33
CHKA-204ENST00000528235 NIFKQ9BYG3 293 aaKnown RBP6.72□□□□□ -1.33
CHKA-204ENST00000528235 BICC1Q9H694 974 aaKnown RBP6.72□□□□□ -1.33
CHKA-204ENST00000528235 DDX4Q9NQI0 724 aaKnown RBP6.72□□□□□ -1.33
CHKA-204ENST00000528235 FLRT1Q9NZU1 646 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 ABCF2Q9UG63 623 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 DENND2AQ9ULE3 1009 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 SALL1Q9NSC2 1324 aa6.72□□□□□ -1.33
CHKA-204ENST00000528235 SLC15A5A6NIM6 579 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 SHISA8B8ZZ34 492 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 USP17L10C9JJH3 530 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 ASNSP08243 561 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 FGFR2P21802 821 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 CYP2C19P33261 490 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 ABL2P42684 1182 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 SNX17Q15036 470 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 SPTY2D1Q68D10 685 aaPredicted RBP6.71□□□□□ -1.34
CHKA-204ENST00000528235 CCDC174Q6PII3 467 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 DPP9Q86TI2 863 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 NLRP8Q86W28 1048 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 PLPP7Q8NBV4 271 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 KLHDC4Q8TBB5 520 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 SNX27Q96L92 541 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 WDR18Q9BV38 432 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 EPHX3Q9H6B9 360 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 GDPD2Q9HCC8 539 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 TMEM39AQ9NV64 488 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 MSRAQ9UJ68 235 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 GAKO14976 1311 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 ZNF236Q9UL36 1845 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 PIEZO1Q92508 2521 aa6.71□□□□□ -1.34
CHKA-204ENST00000528235 BNIP3LO60238 219 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 PQBP1O60828 265 aaKnown RBP6.7□□□□□ -1.34
CHKA-204ENST00000528235 IGSF3O75054 1194 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 STAU1O95793 577 aaKnown RBP6.7□□□□□ -1.34
CHKA-204ENST00000528235 NBPF7P0C2Y1 421 aaPredicted RBP6.7□□□□□ -1.34
CHKA-204ENST00000528235 PTMSP20962 102 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 SMTNP53814 917 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 EPHB4P54760 987 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 C1orf53Q5VUE5 145 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 SLCO4C1Q6ZQN7 724 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 MICALL1Q8N3F8 863 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 SLC44A5Q8NCS7 719 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 NPLOC4Q8TAT6 608 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 KAZALD1Q96I82 304 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 PBX4Q9BYU1 374 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 SLC28A3Q9HAS3 691 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 NDFIP2Q9NV92 336 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 CXXC1Q9P0U4 656 aaPredicted RBP6.7□□□□□ -1.34
CHKA-204ENST00000528235 HERC5Q9UII4 1024 aaKnown RBP6.7□□□□□ -1.34
CHKA-204ENST00000528235 RABGAP1Q9Y3P9 1069 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 PCDHGC4Q9Y5F7 938 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 REV3LO60673 3130 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 PRRC2BQ5JSZ5 2229 aaKnown RBP6.7□□□□□ -1.34
CHKA-204ENST00000528235 MROH7-TTC4A0A0A0MT08 1334 aa6.7□□□□□ -1.34
CHKA-204ENST00000528235 RFX7Q2KHR2 1363 aa6.69□□□□□ -1.34
CHKA-204ENST00000528235 MCM3APO60318 1980 aa6.69□□□□□ -1.34
CHKA-204ENST00000528235 PARP14Q460N5 1801 aa6.69□□□□□ -1.34
CHKA-204ENST00000528235 DCDC2CA8MYV0 355 aa6.69□□□□□ -1.34
CHKA-204ENST00000528235 EYA2O00167 538 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms