RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 UBE2OQ9C0C9 1292 aaKnown RBP20.32■□□□□ 0.84
PACSIN3-202ENST00000524509 RNF146Q9NTX7 359 aa20.32■□□□□ 0.84
PACSIN3-202ENST00000524509 MAP3K20Q9NYL2 800 aaKnown RBP20.32■□□□□ 0.84
PACSIN3-202ENST00000524509 LIMCH1Q9UPQ0 1083 aa20.32■□□□□ 0.84
PACSIN3-202ENST00000524509 PLXNB2O15031 1838 aa20.32■□□□□ 0.84
PACSIN3-202ENST00000524509 MAP2K5Q13163 448 aa20.31■□□□□ 0.84
PACSIN3-202ENST00000524509 MORN1Q5T089 497 aa20.31■□□□□ 0.84
PACSIN3-202ENST00000524509 MAP3K21Q5TCX8 1036 aa20.31■□□□□ 0.84
PACSIN3-202ENST00000524509 HOMER1Q86YM7 354 aa20.31■□□□□ 0.84
PACSIN3-202ENST00000524509 TRIM22Q8IYM9 498 aa20.31■□□□□ 0.84
PACSIN3-202ENST00000524509 SRBD1Q8N5C6 995 aaKnown RBP20.31■□□□□ 0.84
PACSIN3-202ENST00000524509 KIF2CQ99661 725 aa20.31■□□□□ 0.84
PACSIN3-202ENST00000524509 DIS3Q9Y2L1 958 aaKnown RBP20.31■□□□□ 0.84
PACSIN3-202ENST00000524509 PCDHA1Q9Y5I3 950 aa20.31■□□□□ 0.84
PACSIN3-202ENST00000524509 HOXC6P09630 235 aa20.3■□□□□ 0.84
PACSIN3-202ENST00000524509 TRIB2Q92519 343 aa20.3■□□□□ 0.84
PACSIN3-202ENST00000524509 PIGSQ96S52 555 aa20.3■□□□□ 0.84
PACSIN3-202ENST00000524509 MPHOSPH6Q99547 160 aaKnown RBP20.3■□□□□ 0.84
PACSIN3-202ENST00000524509 CPVLQ9H3G5 476 aa20.3■□□□□ 0.84
PACSIN3-202ENST00000524509 SH2B1Q9NRF2 756 aaPredicted RBP20.3■□□□□ 0.84
PACSIN3-202ENST00000524509 A0A0G2JMZ2 1700 aa20.3■□□□□ 0.84
PACSIN3-202ENST00000524509 RLFQ13129 1914 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 B4DLN1 442 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 CYTH3O43739 400 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 PEX10O60683 326 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 PFKFB2O60825 505 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 PLEKHA8P1O95397 391 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 IFNAR1P17181 557 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 ADORA2AP29274 412 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 ADD1P35611 737 aaKnown RBP20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 MRPL12P52815 198 aaKnown RBP20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 SNAP25P60880 206 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 RAB11FIP4Q86YS3 637 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 APBA2Q99767 749 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 RNF26Q9BY78 433 aaPredicted RBP20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 GLT8D2Q9H1C3 349 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 HOMER2Q9NSB8 354 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 RIPK3Q9Y572 518 aa20.29■□□□□ 0.84
PACSIN3-202ENST00000524509 LAMA2P24043 3122 aaKnown RBP20.28■□□□□ 0.84
PACSIN3-202ENST00000524509 LOC102724159A0A0B4J2E5 919 aa20.28■□□□□ 0.84
PACSIN3-202ENST00000524509 PWP2Q15269 919 aaKnown RBP20.28■□□□□ 0.84
PACSIN3-202ENST00000524509 USH1GQ495M9 461 aa20.28■□□□□ 0.84
PACSIN3-202ENST00000524509 FAM177A1Q8N128 213 aaPredicted RBP20.28■□□□□ 0.84
PACSIN3-202ENST00000524509 MSL3Q8N5Y2 521 aaKnown RBP20.28■□□□□ 0.84
PACSIN3-202ENST00000524509 CCDC12Q8WUD4 166 aaPredicted RBP20.28■□□□□ 0.84
PACSIN3-202ENST00000524509 USP6NLQ92738 828 aa20.28■□□□□ 0.84
PACSIN3-202ENST00000524509 TPCN1Q9ULQ1 816 aa20.28■□□□□ 0.84
PACSIN3-202ENST00000524509 PRPF3O43395 683 aaKnown RBP20.27■□□□□ 0.84
PACSIN3-202ENST00000524509 COL6A1P12109 1028 aa20.27■□□□□ 0.84
PACSIN3-202ENST00000524509 PRKAR2AP13861 404 aaKnown RBP20.27■□□□□ 0.84
PACSIN3-202ENST00000524509 CDC27P30260 824 aa20.27■□□□□ 0.84
PACSIN3-202ENST00000524509 CCT2P78371 535 aaKnown RBP20.27■□□□□ 0.84
PACSIN3-202ENST00000524509 SSRP1Q08945 709 aaKnown RBP20.27■□□□□ 0.84
PACSIN3-202ENST00000524509 CCDC82Q8N4S0 544 aa20.27■□□□□ 0.84
PACSIN3-202ENST00000524509 COL25A1Q9BXS0 654 aaPredicted RBP20.27■□□□□ 0.84
PACSIN3-202ENST00000524509 FAM217BQ9NTX9 383 aaPredicted RBP20.27■□□□□ 0.84
PACSIN3-202ENST00000524509 ADD3Q9UEY8 706 aaKnown RBP20.27■□□□□ 0.84
PACSIN3-202ENST00000524509 POTEB2H3BUK9 544 aa20.26■□□□□ 0.83
PACSIN3-202ENST00000524509 CYP2B6P20813 491 aa20.26■□□□□ 0.83
PACSIN3-202ENST00000524509 PPP1R18Q6NYC8 613 aa20.26■□□□□ 0.83
PACSIN3-202ENST00000524509 ZNF467Q7Z7K2 595 aaPredicted RBP20.26■□□□□ 0.83
PACSIN3-202ENST00000524509 WASF1Q92558 559 aa20.26■□□□□ 0.83
PACSIN3-202ENST00000524509 V9GY48 417 aaPredicted RBP20.26■□□□□ 0.83
PACSIN3-202ENST00000524509 FUT2Q10981 343 aa20.25■□□□□ 0.83
PACSIN3-202ENST00000524509 STK3Q13188 491 aa20.25■□□□□ 0.83
PACSIN3-202ENST00000524509 MFSD14CQ5VZR4 134 aa20.25■□□□□ 0.83
PACSIN3-202ENST00000524509 OLFML2BQ68BL8 750 aa20.25■□□□□ 0.83
PACSIN3-202ENST00000524509 FAM109BQ6ICB4 259 aaPredicted RBP20.25■□□□□ 0.83
PACSIN3-202ENST00000524509 NSMFQ6X4W1 530 aa20.25■□□□□ 0.83
PACSIN3-202ENST00000524509 RNF207Q6ZRF8 634 aa20.25■□□□□ 0.83
PACSIN3-202ENST00000524509 CUL5Q93034 780 aa20.25■□□□□ 0.83
PACSIN3-202ENST00000524509 A1CFQ9NQ94 594 aaKnown RBP20.25■□□□□ 0.83
PACSIN3-202ENST00000524509 DNAH12Q6ZR08 3092 aa20.25■□□□□ 0.83
PACSIN3-202ENST00000524509 PARP14Q460N5 1801 aa20.25■□□□□ 0.83
PACSIN3-202ENST00000524509 CNTNAP5Q8WYK1 1306 aa20.25■□□□□ 0.83
PACSIN3-202ENST00000524509 PTPDC1A2A3K4 754 aa20.24■□□□□ 0.83
PACSIN3-202ENST00000524509 DEXIO95424 95 aa20.24■□□□□ 0.83
PACSIN3-202ENST00000524509 XBP1P17861 261 aa20.24■□□□□ 0.83
PACSIN3-202ENST00000524509 NTRK3Q16288 839 aa20.24■□□□□ 0.83
PACSIN3-202ENST00000524509 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.24■□□□□ 0.83
PACSIN3-202ENST00000524509 CMTR1Q8N1G2 835 aaKnown RBP20.24■□□□□ 0.83
PACSIN3-202ENST00000524509 PIBF1Q8WXW3 757 aa20.24■□□□□ 0.83
PACSIN3-202ENST00000524509 GTF3C6Q969F1 213 aa20.24■□□□□ 0.83
PACSIN3-202ENST00000524509 CYP39A1Q9NYL5 469 aa20.24■□□□□ 0.83
PACSIN3-202ENST00000524509 DNAJC25-GNG10A0A024R161 153 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 ASB14A6NK59 587 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 GCOM1H8Y6P7 765 aaPredicted RBP20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 POLR2MP0CAP2 368 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 SCG2P13521 617 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 SCRN1Q12765 414 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 ME3Q16798 604 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 PFKFB3Q16875 520 aaPredicted RBP20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 SLC35G1Q2M3R5 365 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 ZNF792Q3KQV3 632 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 MUM1L1Q5H9M0 696 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 MCTP2Q6DN12 878 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 HEATR3Q7Z4Q2 680 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 CCDC148Q8NFR7 591 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 DNERQ8NFT8 737 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 CLEC4DQ8WXI8 215 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms