RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 MTMR9Q96QG7 549 aa15.46■□□□□ 0.07
LDLRAD3-202ENST00000524419 GTPBP4Q9BZE4 634 aaKnown RBP15.46■□□□□ 0.07
LDLRAD3-202ENST00000524419 RAB34Q9BZG1 259 aa15.46■□□□□ 0.07
LDLRAD3-202ENST00000524419 DDX41Q9UJV9 622 aaKnown RBP15.46■□□□□ 0.07
LDLRAD3-202ENST00000524419 COL2A1P02458 1487 aaPredicted RBP15.46■□□□□ 0.07
LDLRAD3-202ENST00000524419 GOLGA6L9A6NEM1 432 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 SPDYE4A6NLX3 237 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 PPIP5K2O43314 1243 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 RAD21O60216 631 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 COBLO75128 1261 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 TDP2O95551 362 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 PBX1P40424 430 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 ADKP55263 362 aaKnown RBP15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 AMPD3Q01432 767 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 UBE2SQ16763 222 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 TATDN1Q6P1N9 297 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 TRIM65Q6PJ69 517 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 TMEM179Q6ZVK1 233 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 LRRC15Q8TF66 581 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 PANX2Q96RD6 677 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 GLT8D2Q9H1C3 349 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 EXOC1Q9NV70 894 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 ITIH6Q6UXX5 1313 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 KCNJ18B7U540 433 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 H7C1D1 291 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 PSMA7O14818 248 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 SLC37A4O43826 429 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 ENTPD3O75355 529 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 CCT6AP40227 531 aaKnown RBP15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 SLC1A4P43007 532 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 CLK2P49760 499 aaKnown RBP15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 ICA1Q05084 483 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 KCNJ12Q14500 433 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 UTP14CQ5TAP6 766 aaKnown RBP15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 SLFN13Q68D06 897 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 GIMAP8Q8ND71 665 aaPredicted RBP15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 C7orf25Q9BPX7 421 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 SRRTQ9BXP5 876 aaKnown RBP15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 LRWD1Q9UFC0 647 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 MAPK8IP1Q9UQF2 711 aa15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.45■□□□□ 0.06
LDLRAD3-202ENST00000524419 ATRNL1Q5VV63 1379 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 N4BP3O15049 544 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 TPM1P09493 284 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 COPB1P53618 953 aaKnown RBP15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 ASIC1P78348 528 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 SEPT2Q15019 361 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 ELF2Q15723 593 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 ABCB5Q2M3G0 1257 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 TCP11X2Q5H9J9 407 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 CDK5RAP3Q96JB5 506 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 NAP1L4Q99733 375 aaKnown RBP15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 MMTAG2Q9BU76 263 aaKnown RBP15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 TRIM9Q9C026 710 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 TDRD3Q9H7E2 651 aaKnown RBP15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 PSTPIP2Q9H939 334 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 STK17AQ9UEE5 414 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 PPP2R2CQ9Y2T4 447 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 GCFC2P16383 781 aaKnown RBP15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 ZSCAN20P17040 1043 aaPredicted RBP15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 SHROOM1Q2M3G4 852 aaPredicted RBP15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 QRICH1Q2TAL8 776 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 PPP4R3AQ6IN85 833 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 TAB2Q9NYJ8 693 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 DNAI1Q9UI46 699 aa15.44■□□□□ 0.06
LDLRAD3-202ENST00000524419 SRCAPQ6ZRS2 3230 aa15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 LRRC10BA6NIK2 292 aa15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 GDF11O95390 407 aa15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 PPP1R2P41236 205 aa15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 DMTNQ08495 405 aa15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 PDIA5Q14554 519 aa15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 CDC37Q16543 378 aaPredicted RBP15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 GRIPAP1Q4V328 841 aa15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 NOC3LQ8WTT2 800 aaKnown RBP15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 DHTKD1Q96HY7 919 aaPredicted RBP15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 NAA15Q9BXJ9 866 aaKnown RBP15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 THAP9Q9H5L6 903 aa15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 DDX25Q9UHL0 483 aaKnown RBP15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 V9GYY5 206 aaPredicted RBP15.43■□□□□ 0.06
LDLRAD3-202ENST00000524419 C21orf2O43822 256 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 MFAP3LO75121 409 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 PDE4DQ08499 809 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 RBL2Q08999 1139 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 GRB10Q13322 594 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 TRIM14Q14142 442 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 SV2BQ7L1I2 683 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 CNGA4Q8IV77 575 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 GMCL1P1Q8NEA9 526 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 CCDC51Q96ER9 411 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 TRIM47Q96LD4 638 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 VPS16Q9H269 839 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 TMOD2Q9NZR1 351 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 BICDL2A1A5D9 508 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 TRIM49BA6NDI0 452 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 YDJCA8MPS7 323 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 EDIL3O43854 480 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 EEF1GP26641 437 aaKnown RBP15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 KRT79Q5XKE5 535 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 FBXO38Q6PIJ6 1188 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms