RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 SMCR8Q8TEV9 937 aaPredicted RBP13.28□□□□□ -0.28
SPIDR-217ENST00000522117 PURBQ96QR8 312 aaKnown RBP13.28□□□□□ -0.28
SPIDR-217ENST00000522117 CTAGE1Q96RT6 745 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 PREBQ9HCU5 417 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 ADAM22Q9P0K1 906 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 LRRC42Q9Y546 428 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 KDM4FA0A1W2PPD8 638 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 CCDC129Q6ZRS4 1044 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 GRAMD1CQ8IYS0 662 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 KIFAP3Q92845 792 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 MAP3K14Q99558 947 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 BOLA2Q9H3K6 86 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 NALCNQ8IZF0 1738 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 RFX7Q2KHR2 1363 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 EDC4Q6P2E9 1401 aaKnown RBP13.28□□□□□ -0.28
SPIDR-217ENST00000522117 GLI1P08151 1106 aa13.27□□□□□ -0.28
SPIDR-217ENST00000522117 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.28
SPIDR-217ENST00000522117 PSMC4P43686 418 aa13.27□□□□□ -0.28
SPIDR-217ENST00000522117 GUCY2FP51841 1108 aa13.27□□□□□ -0.28
SPIDR-217ENST00000522117 STX17P56962 302 aa13.27□□□□□ -0.28
SPIDR-217ENST00000522117 AKNAD1Q5T1N1 836 aa13.27□□□□□ -0.28
SPIDR-217ENST00000522117 FOXB2Q5VYV0 432 aa13.27□□□□□ -0.28
SPIDR-217ENST00000522117 SULT6B1Q6IMI4 303 aa13.27□□□□□ -0.28
SPIDR-217ENST00000522117 TRIML1Q8N9V2 468 aa13.27□□□□□ -0.28
SPIDR-217ENST00000522117 EHD2Q9NZN4 543 aa13.27□□□□□ -0.28
SPIDR-217ENST00000522117 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.28
SPIDR-217ENST00000522117 STAT6P42226 847 aa13.27□□□□□ -0.29
SPIDR-217ENST00000522117 NCALDP61601 193 aa13.27□□□□□ -0.29
SPIDR-217ENST00000522117 DEUP1Q05D60 604 aa13.27□□□□□ -0.29
SPIDR-217ENST00000522117 MPP3Q13368 585 aa13.27□□□□□ -0.29
SPIDR-217ENST00000522117 CUL4BQ13620 913 aa13.27□□□□□ -0.29
SPIDR-217ENST00000522117 INF2Q27J81 1249 aa13.27□□□□□ -0.29
SPIDR-217ENST00000522117 CWC25Q9NXE8 425 aaPredicted RBP13.27□□□□□ -0.29
SPIDR-217ENST00000522117 GALNT8Q9NY28 637 aa13.27□□□□□ -0.29
SPIDR-217ENST00000522117 TLR7Q9NYK1 1049 aaKnown RBP13.27□□□□□ -0.29
SPIDR-217ENST00000522117 ATXN10Q9UBB4 475 aa13.27□□□□□ -0.29
SPIDR-217ENST00000522117 DUSP10Q9Y6W6 482 aa13.27□□□□□ -0.29
SPIDR-217ENST00000522117 ZSCAN5CA6NGD5 496 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 SEMA3EO15041 775 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 PENKP01210 267 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 EIF4BP23588 611 aaKnown RBP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 CCT6AP40227 531 aaKnown RBP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 PPP2R2AP63151 447 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 FAM133BQ5BKY9 247 aaKnown RBP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 SFMBT2Q5VUG0 894 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 OR52E8Q6IFG1 317 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 IFT20Q8IY31 132 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 EAF2Q96CJ1 260 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 RPS6KC1Q96S38 1066 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 PA2G4Q9UQ80 394 aaKnown RBP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 ESYT3A0FGR9 886 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 H0YGN5 161 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 KRT86O43790 486 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 SEPT2Q15019 361 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 CMPK2Q5EBM0 449 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 C8orf74Q6P047 294 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 LRIG3Q6UXM1 1119 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 EDC3Q96F86 508 aaKnown RBP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 CCDC8Q9H0W5 538 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 PLCB1Q9NQ66 1216 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 SERTAD1Q9UHV2 236 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 NFS1Q9Y697 457 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 SYNRGQ9UMZ2 1314 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 SASH1O94885 1247 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 CHGBP05060 677 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 PDHA1P08559 390 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 RARAP10276 462 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 ZNF24P17028 368 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 GNAZP19086 355 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 RPL13P26373 211 aaKnown RBP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 HSPA9P38646 679 aaKnown RBP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 RFC5P40937 340 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 MECOMQ03112 1051 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 TRIM14Q14142 442 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 ITIH4Q14624 930 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 Q4G0T1 1027 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 CHADLQ6NUI6 762 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 TMEM154Q6P9G4 183 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 WDR59Q6PJI9 974 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 MAMSTRQ6ZN01 415 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 SPATA20Q8TB22 786 aa13.26□□□□□ -0.29
SPIDR-217ENST00000522117 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.26□□□□□ -0.29
SPIDR-217ENST00000522117 AFF2P51816 1311 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPIDR-217ENST00000522117 KRT16P08779 473 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 KRT31Q15323 416 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 KIAA0753Q2KHM9 967 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 LMNTD2Q8IXW0 634 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 LINS1Q8NG48 757 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 IFT81Q8WYA0 676 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 OPTNQ96CV9 577 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 CHMP6Q96FZ7 201 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 NDNQ99608 321 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 RBM12Q9NTZ6 932 aaKnown RBP13.25□□□□□ -0.29
SPIDR-217ENST00000522117 THRAP3Q9Y2W1 955 aaKnown RBP13.25□□□□□ -0.29
SPIDR-217ENST00000522117 ACEP12821 1306 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 MAP3K15Q6ZN16 1313 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 GCOM1H8Y6P7 765 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms