RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 ZNF76P36508 570 aa6.02□□□□□ -1.45
HDAC2-208ENST00000520746 ANKRD39Q53RE8 183 aa6.02□□□□□ -1.45
HDAC2-208ENST00000520746 NOL9Q5SY16 702 aaKnown RBP6.02□□□□□ -1.45
HDAC2-208ENST00000520746 AXDND1Q5T1B0 1012 aaPredicted RBP6.02□□□□□ -1.45
HDAC2-208ENST00000520746 HS2ST1Q7LGA3 356 aa6.02□□□□□ -1.45
HDAC2-208ENST00000520746 FIBCD1Q8N539 461 aa6.02□□□□□ -1.45
HDAC2-208ENST00000520746 NLGN2Q8NFZ4 835 aa6.02□□□□□ -1.45
HDAC2-208ENST00000520746 SMARCC1Q92922 1105 aaPredicted RBP6.02□□□□□ -1.45
HDAC2-208ENST00000520746 RNF34Q969K3 372 aa6.02□□□□□ -1.45
HDAC2-208ENST00000520746 BCAS3Q9H6U6 928 aa6.02□□□□□ -1.45
HDAC2-208ENST00000520746 RXFP1Q9HBX9 757 aa6.02□□□□□ -1.45
HDAC2-208ENST00000520746 FHOD1Q9Y613 1164 aa6.02□□□□□ -1.45
HDAC2-208ENST00000520746 AKAP8O43823 692 aaKnown RBP6.01□□□□□ -1.45
HDAC2-208ENST00000520746 L1CAMP32004 1257 aa6.01□□□□□ -1.45
HDAC2-208ENST00000520746 NOP2P46087 812 aaKnown RBP6.01□□□□□ -1.45
HDAC2-208ENST00000520746 GJA9P57773 515 aa6.01□□□□□ -1.45
HDAC2-208ENST00000520746 NOX5Q96PH1 765 aa6.01□□□□□ -1.45
HDAC2-208ENST00000520746 RBM15Q96T37 977 aaKnown RBP eCLIP6.01□□□□□ -1.45
HDAC2-208ENST00000520746 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
HDAC2-208ENST00000520746 METTL5Q9NRN9 209 aaKnown RBP6.01□□□□□ -1.45
HDAC2-208ENST00000520746 SMPD4Q9NXE4 827 aa6.01□□□□□ -1.45
HDAC2-208ENST00000520746 ZNRF3Q9ULT6 936 aa6.01□□□□□ -1.45
HDAC2-208ENST00000520746 MATN3O15232 486 aa6□□□□□ -1.45
HDAC2-208ENST00000520746 TBC1D8O95759 1140 aa6□□□□□ -1.45
HDAC2-208ENST00000520746 CD3EP07766 207 aa6□□□□□ -1.45
HDAC2-208ENST00000520746 CD247P20963 164 aa6□□□□□ -1.45
HDAC2-208ENST00000520746 ZXDAP98168 799 aa6□□□□□ -1.45
HDAC2-208ENST00000520746 FANCCQ00597 558 aa6□□□□□ -1.45
HDAC2-208ENST00000520746 C9orf131Q5VYM1 1079 aa6□□□□□ -1.45
HDAC2-208ENST00000520746 TAB3Q8N5C8 712 aaPredicted RBP6□□□□□ -1.45
HDAC2-208ENST00000520746 SMARCC2Q8TAQ2 1214 aa6□□□□□ -1.45
HDAC2-208ENST00000520746 TSPAN17Q96FV3 270 aa6□□□□□ -1.45
HDAC2-208ENST00000520746 FBLN5Q9UBX5 448 aa6□□□□□ -1.45
HDAC2-208ENST00000520746 HDLBPQ00341 1268 aaKnown RBP5.99□□□□□ -1.45
HDAC2-208ENST00000520746 USP48Q86UV5 1035 aa5.99□□□□□ -1.45
HDAC2-208ENST00000520746 ZNF761Q86XN6 746 aaPredicted RBP5.99□□□□□ -1.45
HDAC2-208ENST00000520746 NOL6Q9H6R4 1146 aaKnown RBP5.99□□□□□ -1.45
HDAC2-208ENST00000520746 FAM86C1Q9NVL1 165 aa5.99□□□□□ -1.45
HDAC2-208ENST00000520746 SPATA6Q9NWH7 488 aaPredicted RBP5.99□□□□□ -1.45
HDAC2-208ENST00000520746 SF3B6Q9Y3B4 125 aaKnown RBP5.99□□□□□ -1.45
HDAC2-208ENST00000520746 ZNF451Q9Y4E5 1061 aa5.99□□□□□ -1.45
HDAC2-208ENST00000520746 TP53P04637 393 aaPredicted RBP5.98□□□□□ -1.45
HDAC2-208ENST00000520746 TCF3P15923 654 aa5.98□□□□□ -1.45
HDAC2-208ENST00000520746 SARSP49591 514 aaKnown RBP5.98□□□□□ -1.45
HDAC2-208ENST00000520746 POU4F1Q01851 419 aa5.98□□□□□ -1.45
HDAC2-208ENST00000520746 ZYXQ15942 572 aaKnown RBP5.98□□□□□ -1.45
HDAC2-208ENST00000520746 ZDHHC15Q96MV8 337 aa5.98□□□□□ -1.45
HDAC2-208ENST00000520746 NTMQ9P121 344 aa5.98□□□□□ -1.45
HDAC2-208ENST00000520746 ITGA4P13612 1032 aa5.97□□□□□ -1.45
HDAC2-208ENST00000520746 RCSD1Q6JBY9 416 aa5.97□□□□□ -1.45
HDAC2-208ENST00000520746 CABP7Q86V35 215 aa5.97□□□□□ -1.45
HDAC2-208ENST00000520746 KIAA0825Q8IV33 1275 aa5.97□□□□□ -1.45
HDAC2-208ENST00000520746 CPA5Q8WXQ8 436 aa5.97□□□□□ -1.45
HDAC2-208ENST00000520746 TM9SF2Q99805 663 aa5.97□□□□□ -1.45
HDAC2-208ENST00000520746 RWDD3Q9Y3V2 267 aa5.97□□□□□ -1.45
HDAC2-208ENST00000520746 C1QTNF3-AMACRE9PGA6 284 aa5.96□□□□□ -1.46
HDAC2-208ENST00000520746 IMPDH2P12268 514 aa5.96□□□□□ -1.46
HDAC2-208ENST00000520746 CACNB2Q08289 660 aaPredicted RBP5.96□□□□□ -1.46
HDAC2-208ENST00000520746 ZNF394Q53GI3 561 aa5.96□□□□□ -1.46
HDAC2-208ENST00000520746 CPZQ66K79 652 aa5.96□□□□□ -1.46
HDAC2-208ENST00000520746 UNC5AQ6ZN44 842 aa5.96□□□□□ -1.46
HDAC2-208ENST00000520746 METTL16Q86W50 562 aaKnown RBP5.96□□□□□ -1.46
HDAC2-208ENST00000520746 NT5DC4Q86YG4 428 aa5.96□□□□□ -1.46
HDAC2-208ENST00000520746 LZTR1Q8N653 840 aa5.96□□□□□ -1.46
HDAC2-208ENST00000520746 NETO2Q8NC67 525 aa5.96□□□□□ -1.46
HDAC2-208ENST00000520746 ZBTB8AQ96BR9 441 aa5.96□□□□□ -1.46
HDAC2-208ENST00000520746 MCMBPQ9BTE3 642 aa5.96□□□□□ -1.46
HDAC2-208ENST00000520746 SPON2Q9BUD6 331 aa5.96□□□□□ -1.46
HDAC2-208ENST00000520746 CBFA2T2O43439 604 aa5.95□□□□□ -1.46
HDAC2-208ENST00000520746 ZNF20P17024 532 aa5.95□□□□□ -1.46
HDAC2-208ENST00000520746 TTC9BQ8N6N2 239 aa5.95□□□□□ -1.46
HDAC2-208ENST00000520746 ADAMTS17Q8TE56 1095 aa5.95□□□□□ -1.46
HDAC2-208ENST00000520746 PEX11GQ96HA9 241 aa5.95□□□□□ -1.46
HDAC2-208ENST00000520746 C8orf49Q96NF6 230 aa5.95□□□□□ -1.46
HDAC2-208ENST00000520746 C1QTNF3Q9BXJ4 246 aa5.95□□□□□ -1.46
HDAC2-208ENST00000520746 PCDHGB7Q9Y5F8 929 aa5.95□□□□□ -1.46
HDAC2-208ENST00000520746 A0A087WZG4 1122 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 STXBP3O00186 592 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 AURKAO14965 403 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 PPP1R11O60927 126 aaPredicted RBP5.94□□□□□ -1.46
HDAC2-208ENST00000520746 ERCC5P28715 1186 aaPredicted RBP5.94□□□□□ -1.46
HDAC2-208ENST00000520746 SMAD4Q13485 552 aaKnown RBP5.94□□□□□ -1.46
HDAC2-208ENST00000520746 PPP2R5DQ14738 602 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 SLC9A5Q14940 896 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 TBC1D10BQ4KMP7 808 aaPredicted RBP5.94□□□□□ -1.46
HDAC2-208ENST00000520746 EEF1DP3Q658K8 133 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 RUFY4Q6ZNE9 571 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 TTLL7Q6ZT98 887 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 LINC00482Q8N8I6 264 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 DDX11Q96FC9 970 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 LOXL4Q96JB6 756 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 SAMD11Q96NU1 681 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 FERD3LQ96RJ6 166 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 MTA3Q9BTC8 594 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 IGSF5Q9NSI5 407 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 NUDT5Q9UKK9 219 aa5.94□□□□□ -1.46
HDAC2-208ENST00000520746 ZNF214Q9UL59 606 aaPredicted RBP5.94□□□□□ -1.46
HDAC2-208ENST00000520746 PLATP00750 562 aa5.93□□□□□ -1.46
HDAC2-208ENST00000520746 C8BP07358 591 aa5.93□□□□□ -1.46
HDAC2-208ENST00000520746 GUCY2CP25092 1073 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms