RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 PPP2R3AQ06190 1150 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 ORC2Q13416 577 aaPredicted RBP20.59■□□□□ 0.89
SDC2-202ENST00000518385 LONRF3Q496Y0 759 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 USP17L2Q6R6M4 530 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 HEATR3Q7Z4Q2 680 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 CTAGE1Q96RT6 745 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 CSRNP2Q9H175 543 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 CWC15Q9P013 229 aaKnown RBP20.59■□□□□ 0.89
SDC2-202ENST00000518385 NYAP2Q9P242 653 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 FAM205CA6NFA0 338 aa20.58■□□□□ 0.88
SDC2-202ENST00000518385 USP17L5A8MUK1 530 aa20.58■□□□□ 0.88
SDC2-202ENST00000518385 VEGFAP15692 232 aaPredicted RBP20.58■□□□□ 0.88
SDC2-202ENST00000518385 EPS15P42566 896 aa20.58■□□□□ 0.88
SDC2-202ENST00000518385 TNFAIP1Q13829 316 aa20.58■□□□□ 0.88
SDC2-202ENST00000518385 CERKLQ49MI3 558 aaPredicted RBP20.58■□□□□ 0.88
SDC2-202ENST00000518385 KRT25Q7Z3Z0 450 aa20.58■□□□□ 0.88
SDC2-202ENST00000518385 GPKOWQ92917 476 aaPredicted RBP eCLIP20.58■□□□□ 0.885e-11■■■■■ 63.1
SDC2-202ENST00000518385 TMEM39BQ9GZU3 492 aa20.58■□□□□ 0.88
SDC2-202ENST00000518385 KANSL2Q9H9L4 492 aa20.58■□□□□ 0.88
SDC2-202ENST00000518385 FANCLQ9NW38 375 aa20.58■□□□□ 0.88
SDC2-202ENST00000518385 HACL1Q9UJ83 578 aa20.58■□□□□ 0.88
SDC2-202ENST00000518385 FAM196BA6NMK8 535 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 TBC1D12O60347 775 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 CCDC175P0C221 793 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 GOLGA8HP0CJ92 632 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 PTGDRQ13258 359 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 MORC3Q14149 939 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 RASA3Q14644 834 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 POSTNQ15063 836 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 ZNF174Q15697 407 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 PPP1R18Q6NYC8 613 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 SMARCE1Q969G3 411 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 EXOC4Q96A65 974 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 GBP3Q9H0R5 595 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 SYNPO2Q9UMS6 1093 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 PCDHA6Q9UN73 950 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 PCDHA8Q9Y5H6 950 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 PCDHA5Q9Y5H7 936 aa20.57■□□□□ 0.88
SDC2-202ENST00000518385 BAZ2BQ9UIF8 2168 aaKnown RBP20.57■□□□□ 0.88
SDC2-202ENST00000518385 ERLIN1O75477 346 aa20.56■□□□□ 0.88
SDC2-202ENST00000518385 TXLNAP40222 546 aa20.56■□□□□ 0.88
SDC2-202ENST00000518385 NAPAP54920 295 aa20.56■□□□□ 0.88
SDC2-202ENST00000518385 GNG11P61952 73 aa20.56■□□□□ 0.88
SDC2-202ENST00000518385 MAP3K10Q02779 954 aa20.56■□□□□ 0.88
SDC2-202ENST00000518385 ZNF543Q08ER8 600 aa20.56■□□□□ 0.88
SDC2-202ENST00000518385 PNOCQ13519 176 aa20.56■□□□□ 0.88
SDC2-202ENST00000518385 TRPM4Q8TD43 1214 aa20.56■□□□□ 0.88
SDC2-202ENST00000518385 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.56■□□□□ 0.887e-12■■■□□ 14.7
SDC2-202ENST00000518385 MYO1AQ9UBC5 1043 aa20.56■□□□□ 0.88
SDC2-202ENST00000518385 ASTN2O75129 1339 aaPredicted RBP20.56■□□□□ 0.88
SDC2-202ENST00000518385 POLR2DO15514 142 aaKnown RBP20.55■□□□□ 0.88
SDC2-202ENST00000518385 CDK11BP21127 795 aaKnown RBP20.55■□□□□ 0.88
SDC2-202ENST00000518385 LONP1P36776 959 aaKnown RBP20.55■□□□□ 0.88
SDC2-202ENST00000518385 TYW1BQ6NUM6 668 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 DPY19L2Q6NUT2 758 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 TC2NQ8N9U0 490 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 MAN1B1Q9UKM7 699 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 MTMR7Q9Y216 660 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 A0A1B0GTH6 734 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 TBC1D8O95759 1140 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 GRIN1Q05586 938 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 TMEM179Q6ZVK1 233 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 SPATA20Q8TB22 786 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 DCAF4Q8WV16 495 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 KIFC2Q96AC6 838 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 TEPSINQ96N21 525 aa20.55■□□□□ 0.88
SDC2-202ENST00000518385 ITIH6Q6UXX5 1313 aa20.54■□□□□ 0.88
SDC2-202ENST00000518385 ZC3H4Q9UPT8 1303 aaKnown RBP20.54■□□□□ 0.88
SDC2-202ENST00000518385 PNMA6FA0A0J9YX94 578 aa20.54■□□□□ 0.88
SDC2-202ENST00000518385 SMCO2A6NFE2 343 aa20.54■□□□□ 0.88
SDC2-202ENST00000518385 AKR1B15C9JRZ8 316 aaPredicted RBP20.54■□□□□ 0.88
SDC2-202ENST00000518385 MPHOSPH10O00566 681 aaKnown RBP20.54■□□□□ 0.88
SDC2-202ENST00000518385 EIF3JO75822 258 aaKnown RBP20.54■□□□□ 0.88
SDC2-202ENST00000518385 PRPHP41219 470 aa20.54■□□□□ 0.88
SDC2-202ENST00000518385 HIRAP54198 1017 aaPredicted RBP20.54■□□□□ 0.88
SDC2-202ENST00000518385 NR1I3Q14994 352 aa20.54■□□□□ 0.88
SDC2-202ENST00000518385 CDAN1Q8IWY9 1227 aa20.54■□□□□ 0.88
SDC2-202ENST00000518385 PIGSQ96S52 555 aa20.54■□□□□ 0.88
SDC2-202ENST00000518385 ACTN4O43707 911 aaKnown RBP20.53■□□□□ 0.88
SDC2-202ENST00000518385 FECHP22830 423 aa20.53■□□□□ 0.88
SDC2-202ENST00000518385 SMC1AQ14683 1233 aaKnown RBP20.53■□□□□ 0.88
SDC2-202ENST00000518385 NONOQ15233 471 aaKnown RBP eCLIP20.53■□□□□ 0.88
SDC2-202ENST00000518385 ABCB5Q2M3G0 1257 aa20.53■□□□□ 0.88
SDC2-202ENST00000518385 FILIP1LQ4L180 1135 aa20.53■□□□□ 0.88
SDC2-202ENST00000518385 SRGAP1Q7Z6B7 1085 aa20.53■□□□□ 0.88
SDC2-202ENST00000518385 LRRC47Q8N1G4 583 aaKnown RBP20.53■□□□□ 0.88
SDC2-202ENST00000518385 C4orf32Q8N8J7 132 aa20.53■□□□□ 0.88
SDC2-202ENST00000518385 IQUBQ8NA54 791 aa20.53■□□□□ 0.88
SDC2-202ENST00000518385 GLT8D2Q9H1C3 349 aa20.53■□□□□ 0.88
SDC2-202ENST00000518385 DEFB129Q9H1M3 183 aa20.53■□□□□ 0.88
SDC2-202ENST00000518385 ADARB2Q9NS39 739 aaKnown RBP20.53■□□□□ 0.88
SDC2-202ENST00000518385 SERTAD1Q9UHV2 236 aa20.53■□□□□ 0.88
SDC2-202ENST00000518385 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.52■□□□□ 0.88
SDC2-202ENST00000518385 KIF5CO60282 957 aa20.52■□□□□ 0.88
SDC2-202ENST00000518385 MCM7P33993 719 aa20.52■□□□□ 0.88
SDC2-202ENST00000518385 TRIM14Q14142 442 aa20.52■□□□□ 0.88
SDC2-202ENST00000518385 RRP1BQ14684 758 aaKnown RBP20.52■□□□□ 0.88
SDC2-202ENST00000518385 NOM1Q5C9Z4 860 aaKnown RBP20.52■□□□□ 0.88
SDC2-202ENST00000518385 SPECC1Q5M775 1068 aa20.52■□□□□ 0.88
SDC2-202ENST00000518385 APOBEC3FQ8IUX4 373 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms