RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 DCAF4Q8WV16 495 aa17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 ASB2Q96Q27 587 aa17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 ALDH8A1Q9H2A2 487 aaPredicted RBP17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 GPCPD1Q9NPB8 672 aa17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 TRMT13Q9NUP7 481 aaKnown RBP17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 ADD3Q9UEY8 706 aaKnown RBP17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 NFIBO00712 420 aa17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 CALML3P27482 149 aa17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 ALDH5A1P51649 535 aaPredicted RBP17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 MRPS5P82675 430 aaKnown RBP17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 VPS53Q5VIR6 699 aa17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 SYDE2Q5VT97 1194 aa17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 DEFB128Q7Z7B8 93 aa17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 SEZ6LQ9BYH1 1024 aa17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 WDR11Q9BZH6 1224 aa17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 GPHNQ9NQX3 736 aaPredicted RBP17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 ZBTB47Q9UFB7 747 aaPredicted RBP17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 Q9Y3F1 56 aa17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 LRRC37A2A6NM11 1700 aa17.98■□□□□ 0.47
CSGALNACT1-204ENST00000517494 FOXP2O15409 715 aa17.97■□□□□ 0.47
CSGALNACT1-204ENST00000517494 ATP2A2P16615 1042 aaKnown RBP17.97■□□□□ 0.47
CSGALNACT1-204ENST00000517494 DUSP28Q4G0W2 176 aa17.97■□□□□ 0.47
CSGALNACT1-204ENST00000517494 SLC30A10Q6XR72 485 aa17.97■□□□□ 0.47
CSGALNACT1-204ENST00000517494 OR6J1Q8NGC5 347 aa17.97■□□□□ 0.47
CSGALNACT1-204ENST00000517494 PPP1R13LQ8WUF5 828 aa17.97■□□□□ 0.47
CSGALNACT1-204ENST00000517494 TSPYL2Q9H2G4 693 aaPredicted RBP17.97■□□□□ 0.47
CSGALNACT1-204ENST00000517494 RANBP17Q9H2T7 1088 aaKnown RBP17.97■□□□□ 0.47
CSGALNACT1-204ENST00000517494 POLR3EQ9NVU0 708 aa17.97■□□□□ 0.47
CSGALNACT1-204ENST00000517494 TNKSO95271 1327 aa17.97■□□□□ 0.47
CSGALNACT1-204ENST00000517494 CHD9Q3L8U1 2897 aa17.97■□□□□ 0.47
CSGALNACT1-204ENST00000517494 MUC3AQ02505 3323 aa17.97■□□□□ 0.47
CSGALNACT1-204ENST00000517494 COL9A1P20849 921 aa17.96■□□□□ 0.47
CSGALNACT1-204ENST00000517494 CPT1AP50416 773 aa17.96■□□□□ 0.47
CSGALNACT1-204ENST00000517494 CHMP4BP1P59074 171 aa17.96■□□□□ 0.47
CSGALNACT1-204ENST00000517494 TTLL4Q14679 1199 aa17.96■□□□□ 0.47
CSGALNACT1-204ENST00000517494 SKIV2LQ15477 1246 aaKnown RBP17.96■□□□□ 0.47
CSGALNACT1-204ENST00000517494 UHRF1Q96T88 793 aaPredicted RBP17.96■□□□□ 0.47
CSGALNACT1-204ENST00000517494 PCDHB15Q9Y5E8 787 aa17.96■□□□□ 0.47
CSGALNACT1-204ENST00000517494 SUPT20HL2P0C7V6 817 aa17.95■□□□□ 0.46
CSGALNACT1-204ENST00000517494 PDE4DQ08499 809 aa17.95■□□□□ 0.46
CSGALNACT1-204ENST00000517494 MORC4Q8TE76 937 aa17.95■□□□□ 0.46
CSGALNACT1-204ENST00000517494 MTG1Q9BT17 334 aaPredicted RBP17.95■□□□□ 0.46
CSGALNACT1-204ENST00000517494 CERS4Q9HA82 394 aa17.95■□□□□ 0.46
CSGALNACT1-204ENST00000517494 PCDHA11Q9Y5I1 949 aa17.95■□□□□ 0.46
CSGALNACT1-204ENST00000517494 ORC4O43929 436 aa17.94■□□□□ 0.46
CSGALNACT1-204ENST00000517494 TOP1P11387 765 aaKnown RBP17.94■□□□□ 0.46
CSGALNACT1-204ENST00000517494 PURAQ00577 322 aaKnown RBP17.94■□□□□ 0.46
CSGALNACT1-204ENST00000517494 PPP2R5BQ15173 497 aa17.94■□□□□ 0.46
CSGALNACT1-204ENST00000517494 BRDTQ58F21 947 aaPredicted RBP17.94■□□□□ 0.46
CSGALNACT1-204ENST00000517494 RNF207Q6ZRF8 634 aa17.94■□□□□ 0.46
CSGALNACT1-204ENST00000517494 TMEM47Q9BQJ4 181 aa17.94■□□□□ 0.46
CSGALNACT1-204ENST00000517494 ANAPC4Q9UJX5 808 aa17.94■□□□□ 0.46
CSGALNACT1-204ENST00000517494 RAD50Q92878 1312 aa17.94■□□□□ 0.46
CSGALNACT1-204ENST00000517494 CA3P07451 260 aa17.93■□□□□ 0.46
CSGALNACT1-204ENST00000517494 PFKMP08237 780 aa17.93■□□□□ 0.46
CSGALNACT1-204ENST00000517494 ACTN1P12814 892 aa17.93■□□□□ 0.46
CSGALNACT1-204ENST00000517494 NBPF20Q3BBV1 942 aa17.93■□□□□ 0.46
CSGALNACT1-204ENST00000517494 TMEM67Q5HYA8 995 aa17.93■□□□□ 0.46
CSGALNACT1-204ENST00000517494 EVI5LQ96CN4 794 aa17.93■□□□□ 0.46
CSGALNACT1-204ENST00000517494 MPHOSPH6Q99547 160 aaKnown RBP17.93■□□□□ 0.46
CSGALNACT1-204ENST00000517494 FTOQ9C0B1 505 aaKnown RBP eCLIP17.93■□□□□ 0.46
CSGALNACT1-204ENST00000517494 NOD1Q9Y239 953 aa17.93■□□□□ 0.46
CSGALNACT1-204ENST00000517494 RFXAPO00287 272 aa17.92■□□□□ 0.46
CSGALNACT1-204ENST00000517494 HAND2P61296 217 aa17.92■□□□□ 0.46
CSGALNACT1-204ENST00000517494 ANKRD45Q5TZF3 282 aa17.92■□□□□ 0.46
CSGALNACT1-204ENST00000517494 BTNL9Q6UXG8 535 aa17.92■□□□□ 0.46
CSGALNACT1-204ENST00000517494 RETREG2Q8NC44 543 aa17.92■□□□□ 0.46
CSGALNACT1-204ENST00000517494 CLEC4DQ8WXI8 215 aa17.92■□□□□ 0.46
CSGALNACT1-204ENST00000517494 COPS5Q92905 334 aa17.92■□□□□ 0.46
CSGALNACT1-204ENST00000517494 VWCEQ96DN2 955 aa17.92■□□□□ 0.46
CSGALNACT1-204ENST00000517494 FAM227BQ96M60 508 aa17.92■□□□□ 0.46
CSGALNACT1-204ENST00000517494 NECAB3Q96P71 396 aaPredicted RBP17.92■□□□□ 0.46
CSGALNACT1-204ENST00000517494 RAPGEFL1Q9UHV5 662 aa17.92■□□□□ 0.46
CSGALNACT1-204ENST00000517494 CHD7Q9P2D1 2997 aa17.91■□□□□ 0.46
CSGALNACT1-204ENST00000517494 GTPBP6O43824 516 aaPredicted RBP17.91■□□□□ 0.46
CSGALNACT1-204ENST00000517494 PDHBP11177 359 aa17.91■□□□□ 0.46
CSGALNACT1-204ENST00000517494 NOVP48745 357 aa17.91■□□□□ 0.46
CSGALNACT1-204ENST00000517494 RPS6P62753 249 aaKnown RBP17.91■□□□□ 0.46
CSGALNACT1-204ENST00000517494 TFF2Q03403 129 aa17.91■□□□□ 0.46
CSGALNACT1-204ENST00000517494 USH1GQ495M9 461 aa17.91■□□□□ 0.46
CSGALNACT1-204ENST00000517494 SCFD2Q8WU76 684 aa17.91■□□□□ 0.46
CSGALNACT1-204ENST00000517494 HELLSQ9NRZ9 838 aa17.91■□□□□ 0.46
CSGALNACT1-204ENST00000517494 MYO9BQ13459 2157 aa17.9■□□□□ 0.46
CSGALNACT1-204ENST00000517494 LOC102724159A0A0B4J2E5 919 aa17.9■□□□□ 0.46
CSGALNACT1-204ENST00000517494 A0A0D9SFI3 127 aa17.9■□□□□ 0.46
CSGALNACT1-204ENST00000517494 RBM47A0AV96 593 aaKnown RBP17.9■□□□□ 0.46
CSGALNACT1-204ENST00000517494 FGAP02671 866 aa17.9■□□□□ 0.46
CSGALNACT1-204ENST00000517494 TXNP10599 105 aaKnown RBP17.9■□□□□ 0.46
CSGALNACT1-204ENST00000517494 PWP2Q15269 919 aaKnown RBP17.9■□□□□ 0.46
CSGALNACT1-204ENST00000517494 GBF1Q92538 1859 aa17.89■□□□□ 0.45
CSGALNACT1-204ENST00000517494 NKRFO15226 690 aaKnown RBP eCLIP17.89■□□□□ 0.45
CSGALNACT1-204ENST00000517494 ZNF543Q08ER8 600 aa17.89■□□□□ 0.45
CSGALNACT1-204ENST00000517494 ALX1Q15699 326 aa17.89■□□□□ 0.45
CSGALNACT1-204ENST00000517494 ARNTL2Q8WYA1 636 aa17.89■□□□□ 0.45
CSGALNACT1-204ENST00000517494 SLC9A7Q96T83 725 aa17.89■□□□□ 0.45
CSGALNACT1-204ENST00000517494 PNMA2Q9UL42 364 aa17.89■□□□□ 0.45
CSGALNACT1-204ENST00000517494 LCTP09848 1927 aa17.89■□□□□ 0.45
CSGALNACT1-204ENST00000517494 B4DLN1 442 aa17.88■□□□□ 0.45
CSGALNACT1-204ENST00000517494 KPNA6O60684 536 aa17.88■□□□□ 0.45
CSGALNACT1-204ENST00000517494 FGRP09769 529 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms