RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 FBXO40Q9UH90 709 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 SCOCQ9UIL1 159 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 CLRN2A0PK11 232 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 E7EWF7 191 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 POLE2P56282 527 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 RNASE9P60153 205 aaKnown RBP13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 HERC4Q5GLZ8 1057 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 RGS22Q8NE09 1264 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 TCP11Q8WWU5 503 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 ATP6V0A1Q93050 837 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 TRIM31Q9BZY9 425 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 CDC25BP30305 580 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 COPB2P35606 906 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 FAM47AQ5JRC9 791 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 TRIM58Q8NG06 486 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 IQCDQ96DY2 449 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 MIS12Q9H081 205 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 SPHKAPQ2M3C7 1700 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 GMNNO75496 209 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 SF3A3Q12874 501 aaKnown RBP eCLIP13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 FBXO38Q6PIJ6 1188 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 RAB17Q9H0T7 212 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 SLC24A3Q9HC58 644 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 MADDQ8WXG6 1647 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 EIF3CLB5ME19 914 aaKnown RBP13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 PHKA1P46020 1223 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 RPS6KA1Q15418 735 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 DCAF17Q5H9S7 520 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 SMC1BQ8NDV3 1235 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 ARMC2Q8NEN0 867 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 RNF34Q969K3 372 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 EAF2Q96CJ1 260 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 EIF3CQ99613 913 aaKnown RBP13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 SPTLC3Q9NUV7 552 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 PHLPP2Q6ZVD8 1323 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 COL15A1P39059 1388 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 USP31Q70CQ4 1352 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 AGLP35573 1532 aa13.42□□□□□ -0.26
PCDHGA6-201ENST00000517434 CREB3O43889 395 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 EVI5O60447 810 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 RAPGEF1Q13905 1077 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 LRRC24Q50LG9 513 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 MYCT1Q8N699 235 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 HAUS4Q9H6D7 363 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 PARP2Q9UGN5 583 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 SRP68Q9UHB9 627 aaKnown RBP13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 C21orf2O43822 256 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 SUN1O94901 812 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 TCP1P17987 556 aaKnown RBP13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 CCHCR1Q8TD31 782 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 RNF181Q9P0P0 153 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 CTNND2Q9UQB3 1225 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 MED23Q9ULK4 1368 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 DDX39AO00148 427 aaKnown RBP13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 SLFNL1Q499Z3 407 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 KRT40Q6A162 431 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 FANCBQ8NB91 859 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 RETREG2Q8NC44 543 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 TDRD7Q8NHU6 1098 aaKnown RBP13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 MAK16Q9BXY0 300 aaKnown RBP13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 SNX14Q9Y5W7 946 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 TULP4Q9NRJ4 1543 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 PTCH1Q13635 1447 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 TNKSO95271 1327 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 LOC102724159A0A0B4J2E5 919 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 PRPF6O94906 941 aaKnown RBP13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 ERCC5P28715 1186 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 PWP2Q15269 919 aaKnown RBP13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 TAF11Q15544 211 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 LONRF3Q496Y0 759 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 ABI1Q8IZP0 508 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 BLIDQ8IZY5 108 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 WHAMMQ8TF30 809 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 PPP1R13BQ96KQ4 1090 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 ZNF341Q9BYN7 854 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 HYOU1Q9Y4L1 999 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 C1orf167Q5SNV9 1468 aa13.41□□□□□ -0.26
PCDHGA6-201ENST00000517434 CYP27B1O15528 508 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 EXOC3O60645 756 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 GNA14O95837 355 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 GUCY2FP51841 1108 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 NSMCE1Q8WV22 266 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 ZBTB7AO95365 584 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 PPARDQ03181 441 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 PSMD6Q15008 389 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 MORC4Q8TE76 937 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 SH3GL3Q99963 347 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 PCDHA1Q9Y5I3 950 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 NCOA3Q9Y6Q9 1424 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 I3L4J1 428 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 BMP3P12645 472 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 GCFC2P16383 781 aaKnown RBP13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 GJC1P36383 396 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 PPP2R5EQ16537 467 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 CABP7Q86V35 215 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 ABTB1Q969K4 478 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 SKIP12755 728 aa13.4□□□□□ -0.26
PCDHGA6-201ENST00000517434 KRT5P13647 590 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms