RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 ZBBXA8MT70 800 aa16.37■□□□□ 0.21
TSPAN17-206ENST00000507471 SLC16A2P36021 539 aa16.37■□□□□ 0.21
TSPAN17-206ENST00000507471 ALDH5A1P51649 535 aaPredicted RBP16.37■□□□□ 0.21
TSPAN17-206ENST00000507471 BAATQ14032 418 aaPredicted RBP16.37■□□□□ 0.21
TSPAN17-206ENST00000507471 CCDC96Q2M329 555 aa16.37■□□□□ 0.21
TSPAN17-206ENST00000507471 TTBK2Q6IQ55 1244 aa16.37■□□□□ 0.21
TSPAN17-206ENST00000507471 TRMT13Q9NUP7 481 aaKnown RBP16.37■□□□□ 0.21
TSPAN17-206ENST00000507471 PCDHA11Q9Y5I1 949 aa16.37■□□□□ 0.21
TSPAN17-206ENST00000507471 NFIBO00712 420 aa16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 RANBP6O60518 1105 aaKnown RBP16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 PFKMP08237 780 aa16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 SUPT20HL2P0C7V6 817 aa16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 CYP2C9P11712 490 aa16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 ATP2A2P16615 1042 aaKnown RBP16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 PURAQ00577 322 aaKnown RBP16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 VPS53Q5VIR6 699 aa16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 DCAF4Q8WV16 495 aa16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 UHRF1Q96T88 793 aaPredicted RBP16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 WDR11Q9BZH6 1224 aa16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 POLR3EQ9NVU0 708 aa16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 ADD3Q9UEY8 706 aaKnown RBP16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 ANAPC4Q9UJX5 808 aa16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 TNKSO95271 1327 aa16.36■□□□□ 0.21
TSPAN17-206ENST00000507471 CPT1AP50416 773 aa16.35■□□□□ 0.21
TSPAN17-206ENST00000507471 TTLL4Q14679 1199 aa16.35■□□□□ 0.21
TSPAN17-206ENST00000507471 BTNL9Q6UXG8 535 aa16.35■□□□□ 0.21
TSPAN17-206ENST00000507471 SLC30A10Q6XR72 485 aa16.35■□□□□ 0.21
TSPAN17-206ENST00000507471 DEFB128Q7Z7B8 93 aa16.35■□□□□ 0.21
TSPAN17-206ENST00000507471 SCN5AQ14524 2016 aa16.35■□□□□ 0.21
TSPAN17-206ENST00000507471 TANC1Q9C0D5 1861 aa16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 LOC102724159A0A0B4J2E5 919 aa16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 RBM47A0AV96 593 aaKnown RBP16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 PTPDC1A2A3K4 754 aa16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 ORC4O43929 436 aa16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 MYL3P08590 195 aa16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 MX1P20591 662 aa16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 PWP2Q15269 919 aaKnown RBP16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 SYDE2Q5VT97 1194 aa16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 MICALL1Q8N3F8 863 aa16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 IL27Q8NEV9 243 aa16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 OR6J1Q8NGC5 347 aa16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 RAPGEFL1Q9UHV5 662 aa16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 FRMPD2Q68DX3 1309 aaPredicted RBP16.34■□□□□ 0.21
TSPAN17-206ENST00000507471 CA3P07451 260 aa16.33■□□□□ 0.2
TSPAN17-206ENST00000507471 FGRP09769 529 aa16.33■□□□□ 0.2
TSPAN17-206ENST00000507471 PPP1R13LQ8WUF5 828 aa16.33■□□□□ 0.2
TSPAN17-206ENST00000507471 CLEC4DQ8WXI8 215 aa16.33■□□□□ 0.2
TSPAN17-206ENST00000507471 TMEM47Q9BQJ4 181 aa16.33■□□□□ 0.2
TSPAN17-206ENST00000507471 MTG1Q9BT17 334 aaPredicted RBP16.33■□□□□ 0.2
TSPAN17-206ENST00000507471 TSPYL2Q9H2G4 693 aaPredicted RBP16.33■□□□□ 0.2
TSPAN17-206ENST00000507471 PCDHB15Q9Y5E8 787 aa16.33■□□□□ 0.2
TSPAN17-206ENST00000507471 SALL3Q9BXA9 1300 aa16.33■□□□□ 0.2
TSPAN17-206ENST00000507471 RFXAPO00287 272 aa16.32■□□□□ 0.2
TSPAN17-206ENST00000507471 CALML3P27482 149 aa16.32■□□□□ 0.2
TSPAN17-206ENST00000507471 TFF2Q03403 129 aa16.32■□□□□ 0.2
TSPAN17-206ENST00000507471 NBPF20Q3BBV1 942 aa16.32■□□□□ 0.2
TSPAN17-206ENST00000507471 FAM47CQ5HY64 1035 aa16.32■□□□□ 0.2
TSPAN17-206ENST00000507471 TMEM67Q5HYA8 995 aa16.32■□□□□ 0.2
TSPAN17-206ENST00000507471 GPCPD1Q9NPB8 672 aa16.32■□□□□ 0.2
TSPAN17-206ENST00000507471 GPHNQ9NQX3 736 aaPredicted RBP16.32■□□□□ 0.2
TSPAN17-206ENST00000507471 CHD7Q9P2D1 2997 aa16.32■□□□□ 0.2
TSPAN17-206ENST00000507471 SCN10AQ9Y5Y9 1956 aa16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 RAD50Q92878 1312 aa16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 PDHBP11177 359 aa16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 TOP1P11387 765 aaKnown RBP16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 BMP1P13497 986 aa16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 EDNRBP24530 442 aa16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 PPP2R5BQ15173 497 aa16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 RNF207Q6ZRF8 634 aa16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 COPS5Q92905 334 aa16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 NECAB3Q96P71 396 aaPredicted RBP16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 SLC9A7Q96T83 725 aa16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 CERS4Q9HA82 394 aa16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 TOMM22Q9NS69 142 aa16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 MTCH2Q9Y6C9 303 aa16.31■□□□□ 0.2
TSPAN17-206ENST00000507471 EPOPA6NHQ4 379 aa16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 A6NJR5 290 aa16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 PITPNM1O00562 1244 aa16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 NKRFO15226 690 aaKnown RBP eCLIP16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 IQCF3P0C7M6 154 aa16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 ACTN1P12814 892 aa16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 POU3F3P20264 500 aaPredicted RBP16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 RFC2P35250 354 aa16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 KCNQ1P51787 676 aa16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 PDE4DQ08499 809 aa16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 ALX1Q15699 326 aa16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 BRDTQ58F21 947 aaPredicted RBP16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 RRP12Q5JTH9 1297 aaKnown RBP16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 NFRKBQ6P4R8 1299 aa16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 TCP11L1Q9NUJ3 509 aa16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 REV3LO60673 3130 aa16.3■□□□□ 0.2
TSPAN17-206ENST00000507471 TTC28Q96AY4 2481 aa16.29■□□□□ 0.2
TSPAN17-206ENST00000507471 ARHGEF15O94989 841 aa16.29■□□□□ 0.2
TSPAN17-206ENST00000507471 FGAP02671 866 aa16.29■□□□□ 0.2
TSPAN17-206ENST00000507471 RPS6P62753 249 aaKnown RBP16.29■□□□□ 0.2
TSPAN17-206ENST00000507471 SKIV2LQ15477 1246 aaKnown RBP16.29■□□□□ 0.2
TSPAN17-206ENST00000507471 DNERQ8NFT8 737 aa16.29■□□□□ 0.2
TSPAN17-206ENST00000507471 PHOSPHO2Q8TCD6 241 aa16.29■□□□□ 0.2
TSPAN17-206ENST00000507471 SCFD2Q8WU76 684 aa16.29■□□□□ 0.2
TSPAN17-206ENST00000507471 EVI5LQ96CN4 794 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms