RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 LCTP09848 1927 aa23.09■■□□□ 1.29
SFXN1-203ENST00000502393 TNKSO95271 1327 aa23.08■■□□□ 1.29
SFXN1-203ENST00000502393 TIMP1P01033 207 aa23.08■■□□□ 1.29
SFXN1-203ENST00000502393 CALML3P27482 149 aa23.08■■□□□ 1.29
SFXN1-203ENST00000502393 ASPRV1Q53RT3 343 aa23.08■■□□□ 1.29
SFXN1-203ENST00000502393 SLC30A10Q6XR72 485 aa23.08■■□□□ 1.29
SFXN1-203ENST00000502393 RGS22Q8NE09 1264 aa23.08■■□□□ 1.29
SFXN1-203ENST00000502393 RUFY2Q8WXA3 655 aa23.08■■□□□ 1.29
SFXN1-203ENST00000502393 MPHOSPH6Q99547 160 aaKnown RBP23.08■■□□□ 1.29
SFXN1-203ENST00000502393 UBAC1Q9BSL1 405 aa23.08■■□□□ 1.29
SFXN1-203ENST00000502393 MAF1Q9H063 256 aa23.08■■□□□ 1.29
SFXN1-203ENST00000502393 TBX21Q9UL17 535 aa23.08■■□□□ 1.29
SFXN1-203ENST00000502393 RPS6P62753 249 aaKnown RBP23.07■■□□□ 1.28
SFXN1-203ENST00000502393 IRX6P78412 446 aaPredicted RBP23.07■■□□□ 1.28
SFXN1-203ENST00000502393 FPGSQ05932 587 aa23.07■■□□□ 1.28
SFXN1-203ENST00000502393 DUSP28Q4G0W2 176 aa23.07■■□□□ 1.28
SFXN1-203ENST00000502393 DNERQ8NFT8 737 aa23.07■■□□□ 1.28
SFXN1-203ENST00000502393 TLR3O15455 904 aaKnown RBP23.06■■□□□ 1.28
SFXN1-203ENST00000502393 USH1GQ495M9 461 aa23.06■■□□□ 1.28
SFXN1-203ENST00000502393 CXCL17Q6UXB2 119 aa23.06■■□□□ 1.28
SFXN1-203ENST00000502393 FAM126BQ8IXS8 530 aa23.06■■□□□ 1.28
SFXN1-203ENST00000502393 ADGRF4Q8IZF3 695 aa23.06■■□□□ 1.28
SFXN1-203ENST00000502393 SLC43A3Q8NBI5 491 aa23.06■■□□□ 1.28
SFXN1-203ENST00000502393 SEZ6LQ9BYH1 1024 aa23.06■■□□□ 1.28
SFXN1-203ENST00000502393 WDR11Q9BZH6 1224 aa23.06■■□□□ 1.28
SFXN1-203ENST00000502393 CPVLQ9H3G5 476 aa23.06■■□□□ 1.28
SFXN1-203ENST00000502393 STXBP5LQ9Y2K9 1186 aa23.06■■□□□ 1.28
SFXN1-203ENST00000502393 RBM47A0AV96 593 aaKnown RBP23.05■■□□□ 1.28
SFXN1-203ENST00000502393 B4DLN1 442 aa23.05■■□□□ 1.28
SFXN1-203ENST00000502393 PARP1P09874 1014 aaKnown RBP23.05■■□□□ 1.28
SFXN1-203ENST00000502393 CHMLP26374 656 aa23.05■■□□□ 1.28
SFXN1-203ENST00000502393 MRPL12P52815 198 aaKnown RBP23.05■■□□□ 1.28
SFXN1-203ENST00000502393 EPHB4P54760 987 aa23.05■■□□□ 1.28
SFXN1-203ENST00000502393 CDC37Q16543 378 aaPredicted RBP23.05■■□□□ 1.28
SFXN1-203ENST00000502393 TMEM63BQ5T3F8 832 aa23.05■■□□□ 1.28
SFXN1-203ENST00000502393 IFIT1BQ5T764 474 aaKnown RBP23.05■■□□□ 1.28
SFXN1-203ENST00000502393 PTGS1P23219 599 aa23.04■■□□□ 1.28
SFXN1-203ENST00000502393 EDNRBP24530 442 aa23.04■■□□□ 1.28
SFXN1-203ENST00000502393 SMAD3P84022 425 aaKnown RBP23.04■■□□□ 1.28
SFXN1-203ENST00000502393 PDE4DQ08499 809 aa23.04■■□□□ 1.28
SFXN1-203ENST00000502393 TRDNQ13061 729 aa23.04■■□□□ 1.28
SFXN1-203ENST00000502393 MFSD5Q6N075 450 aa23.04■■□□□ 1.28
SFXN1-203ENST00000502393 U3KPZ7 1027 aaPredicted RBP23.04■■□□□ 1.28
SFXN1-203ENST00000502393 ABCB11O95342 1321 aa23.04■■□□□ 1.28
SFXN1-203ENST00000502393 CD4P01730 458 aa23.03■■□□□ 1.28
SFXN1-203ENST00000502393 ITGA7Q13683 1181 aa23.03■■□□□ 1.28
SFXN1-203ENST00000502393 RNPC3Q96LT9 517 aaKnown RBP23.03■■□□□ 1.28
SFXN1-203ENST00000502393 SEC23AQ15436 765 aa23.02■■□□□ 1.28
SFXN1-203ENST00000502393 ZNF697Q5TEC3 545 aa23.02■■□□□ 1.28
SFXN1-203ENST00000502393 MCF2L2Q86YR7 1114 aa23.02■■□□□ 1.28
SFXN1-203ENST00000502393 NKRFO15226 690 aaKnown RBP eCLIP23.01■■□□□ 1.27
SFXN1-203ENST00000502393 DHX16O60231 1041 aaKnown RBP23.01■■□□□ 1.27
SFXN1-203ENST00000502393 CYP21A2P08686 494 aa23.01■■□□□ 1.27
SFXN1-203ENST00000502393 CPT1AP50416 773 aa23.01■■□□□ 1.27
SFXN1-203ENST00000502393 PTH1RQ03431 593 aa23.01■■□□□ 1.27
SFXN1-203ENST00000502393 PPIGQ13427 754 aaKnown RBP eCLIP23.01■■□□□ 1.27
SFXN1-203ENST00000502393 QRICH1Q2TAL8 776 aa23.01■■□□□ 1.27
SFXN1-203ENST00000502393 CYB5R4Q7L1T6 521 aa23.01■■□□□ 1.27
SFXN1-203ENST00000502393 FBXO11Q86XK2 927 aa23.01■■□□□ 1.27
SFXN1-203ENST00000502393 TMEM199Q8N511 208 aa23.01■■□□□ 1.27
SFXN1-203ENST00000502393 SCFD2Q8WU76 684 aa23.01■■□□□ 1.27
SFXN1-203ENST00000502393 JMJD4Q9H9V9 463 aa23.01■■□□□ 1.27
SFXN1-203ENST00000502393 MRPL11Q9Y3B7 192 aaKnown RBP23.01■■□□□ 1.27
SFXN1-203ENST00000502393 GRIN2DO15399 1336 aa23.01■■□□□ 1.27
SFXN1-203ENST00000502393 PPP2R5BQ15173 497 aa23■■□□□ 1.27
SFXN1-203ENST00000502393 SLC17A8Q8NDX2 589 aa23■■□□□ 1.27
SFXN1-203ENST00000502393 VAT1LQ9HCJ6 419 aa23■■□□□ 1.27
SFXN1-203ENST00000502393 POLR3EQ9NVU0 708 aa23■■□□□ 1.27
SFXN1-203ENST00000502393 SGSM2O43147 1006 aa22.99■■□□□ 1.27
SFXN1-203ENST00000502393 BRDTQ58F21 947 aaPredicted RBP22.99■■□□□ 1.27
SFXN1-203ENST00000502393 STAG2Q8N3U4 1231 aa22.99■■□□□ 1.27
SFXN1-203ENST00000502393 OR6J1Q8NGC5 347 aa22.99■■□□□ 1.27
SFXN1-203ENST00000502393 GUCD1Q96NT3 240 aa22.99■■□□□ 1.27
SFXN1-203ENST00000502393 KLRF2D3W0D1 207 aa22.98■■□□□ 1.27
SFXN1-203ENST00000502393 CSF2RAP15509 400 aa22.98■■□□□ 1.27
SFXN1-203ENST00000502393 PSMC6P62333 389 aa22.98■■□□□ 1.27
SFXN1-203ENST00000502393 SYTL5Q8TDW5 730 aaPredicted RBP22.98■■□□□ 1.27
SFXN1-203ENST00000502393 NSUN6Q8TEA1 469 aaKnown RBP22.98■■□□□ 1.27
SFXN1-203ENST00000502393 TBC1D5Q92609 795 aa22.98■■□□□ 1.27
SFXN1-203ENST00000502393 FAM161BQ96MY7 647 aa22.98■■□□□ 1.27
SFXN1-203ENST00000502393 PPP1R12CQ9BZL4 782 aa22.98■■□□□ 1.27
SFXN1-203ENST00000502393 MAD2L2Q9UI95 211 aa22.98■■□□□ 1.27
SFXN1-203ENST00000502393 ERICH2A1L162 156 aa22.97■■□□□ 1.27
SFXN1-203ENST00000502393 PALM3A6NDB9 673 aaPredicted RBP22.97■■□□□ 1.27
SFXN1-203ENST00000502393 TXNP10599 105 aaKnown RBP22.97■■□□□ 1.27
SFXN1-203ENST00000502393 PURAQ00577 322 aaKnown RBP22.97■■□□□ 1.27
SFXN1-203ENST00000502393 TTLL4Q14679 1199 aa22.97■■□□□ 1.27
SFXN1-203ENST00000502393 RALYLQ86SE5 291 aaKnown RBP22.97■■□□□ 1.27
SFXN1-203ENST00000502393 NCOA7Q8NI08 942 aa22.97■■□□□ 1.27
SFXN1-203ENST00000502393 TAAR1Q96RJ0 339 aa22.97■■□□□ 1.27
SFXN1-203ENST00000502393 IWS1Q96ST2 819 aa22.97■■□□□ 1.27
SFXN1-203ENST00000502393 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.97■■□□□ 1.271e-6■□□□□ 8.8
SFXN1-203ENST00000502393 AMNQ9BXJ7 453 aa22.97■■□□□ 1.27
SFXN1-203ENST00000502393 SEMA6BQ9H3T3 888 aa22.97■■□□□ 1.27
SFXN1-203ENST00000502393 HIPK3Q9H422 1215 aa22.97■■□□□ 1.27
SFXN1-203ENST00000502393 GPHNQ9NQX3 736 aaPredicted RBP22.97■■□□□ 1.27
SFXN1-203ENST00000502393 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.96■■□□□ 1.27
SFXN1-203ENST00000502393 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.96■■□□□ 1.27
SFXN1-203ENST00000502393 E7EWF7 191 aa22.96■■□□□ 1.27
SFXN1-203ENST00000502393 IFIT3O14879 490 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms