RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 SMARCE1Q969G3 411 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 EPSTI1Q96J88 318 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 PPP1R9BQ96SB3 815 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 TANGO6Q9C0B7 1094 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 DDX25Q9UHL0 483 aaKnown RBP16.44■□□□□ 0.22
PARP1-209ENST00000498787 SERTAD1Q9UHV2 236 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 MEIS2O14770 477 aa16.43■□□□□ 0.22
PARP1-209ENST00000498787 ACTN4O43707 911 aaKnown RBP16.43■□□□□ 0.22
PARP1-209ENST00000498787 EPHX2P34913 555 aa16.43■□□□□ 0.22
PARP1-209ENST00000498787 MTMR2Q13614 643 aa16.43■□□□□ 0.22
PARP1-209ENST00000498787 KIAA1755Q5JYT7 1200 aa16.43■□□□□ 0.22
PARP1-209ENST00000498787 RRAGBQ5VZM2 374 aa16.43■□□□□ 0.22
PARP1-209ENST00000498787 KRT26Q7Z3Y9 468 aa16.43■□□□□ 0.22
PARP1-209ENST00000498787 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.43■□□□□ 0.22
PARP1-209ENST00000498787 DHX58Q96C10 678 aa16.43■□□□□ 0.22
PARP1-209ENST00000498787 TRIM44Q96DX7 344 aaPredicted RBP16.43■□□□□ 0.22
PARP1-209ENST00000498787 CALML4Q96GE6 196 aa16.43■□□□□ 0.22
PARP1-209ENST00000498787 MTMR9Q96QG7 549 aa16.43■□□□□ 0.22
PARP1-209ENST00000498787 GLIS2Q9BZE0 524 aaPredicted RBP16.43■□□□□ 0.22
PARP1-209ENST00000498787 PPP1R9AQ9ULJ8 1098 aa16.43■□□□□ 0.22
PARP1-209ENST00000498787 SCAF8Q9UPN6 1271 aaKnown RBP16.43■□□□□ 0.22
PARP1-209ENST00000498787 ZHX2Q9Y6X8 837 aa16.43■□□□□ 0.22
PARP1-209ENST00000498787 MYPNQ86TC9 1320 aa16.43■□□□□ 0.22
PARP1-209ENST00000498787 SBF1O95248 1867 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 USP17L15C9J2P7 530 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 USP17L13C9JLJ4 530 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 USP17L11C9JVI0 530 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 USP17L18D6R9N7 530 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 USP17L22D6RA61 530 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 USP17L17D6RBQ6 530 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 USP17L19D6RCP7 530 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 USP17L20D6RJB6 530 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 FLOT1O75955 427 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 CYP3A4P08684 503 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 SREBF1P36956 1147 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 STAT6P42226 847 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 OAZ1P54368 228 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 MDM2Q00987 491 aaPredicted RBP16.42■□□□□ 0.22
PARP1-209ENST00000498787 AMPD3Q01432 767 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 USP17L24Q0WX57 530 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 NT5DC1Q5TFE4 455 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 CCDC174Q6PII3 467 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 USP17L6PQ6QN14 398 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 LDHDQ86WU2 507 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 PDILTQ8N807 584 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 MLKLQ8NB16 471 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 CCDC47Q96A33 483 aaKnown RBP16.42■□□□□ 0.22
PARP1-209ENST00000498787 MBOAT7Q96N66 472 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 GSDMAQ96QA5 445 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 LRRC27Q9C0I9 530 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 DNAJC25Q9H1X3 360 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 TMEM60Q9H2L4 133 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 CBX8Q9HC52 389 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 DISC1Q9NRI5 854 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 RMND1Q9NWS8 449 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 CCPG1Q9ULG6 757 aa16.42■□□□□ 0.22
PARP1-209ENST00000498787 USP2O75604 605 aaPredicted RBP16.41■□□□□ 0.22
PARP1-209ENST00000498787 VCAM1P19320 739 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 HOXA7P31268 230 aaPredicted RBP16.41■□□□□ 0.22
PARP1-209ENST00000498787 CIITAP33076 1130 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 ARHGAP4P98171 946 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 Q4G0T1 1027 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 SH3D19Q5HYK7 790 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 KRT79Q5XKE5 535 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 CABP7Q86V35 215 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 IGSF22Q8N9C0 903 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 ZKSCAN4Q969J2 545 aaPredicted RBP16.41■□□□□ 0.22
PARP1-209ENST00000498787 PAGE5Q96GU1 130 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 FAM20AQ96MK3 541 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 PANK2Q9BZ23 570 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 RPAP3Q9H6T3 665 aaPredicted RBP16.41■□□□□ 0.22
PARP1-209ENST00000498787 SLC38A10Q9HBR0 1119 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 EMILIN3Q9NT22 766 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 LRWD1Q9UFC0 647 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 PCDHA5Q9Y5H7 936 aa16.41■□□□□ 0.22
PARP1-209ENST00000498787 UNCXA6NJT0 531 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 GTPBP6O43824 516 aaPredicted RBP16.4■□□□□ 0.22
PARP1-209ENST00000498787 ZNF76P36508 570 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 TXKP42681 527 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 PNOCQ13519 176 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 IL17AQ16552 155 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 HS1BP3Q53T59 392 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 ILDR2Q71H61 639 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 SH3RF1Q7Z6J0 888 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 KCTD17Q8N5Z5 321 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 CDK5RAP3Q96JB5 506 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
PARP1-209ENST00000498787 IKBKBO14920 756 aa16.39■□□□□ 0.21
PARP1-209ENST00000498787 TDP2O95551 362 aa16.39■□□□□ 0.21
PARP1-209ENST00000498787 CFBP00751 764 aa16.39■□□□□ 0.21
PARP1-209ENST00000498787 SARSP49591 514 aaKnown RBP16.39■□□□□ 0.21
PARP1-209ENST00000498787 SNAP25P60880 206 aa16.39■□□□□ 0.21
PARP1-209ENST00000498787 GHRHRQ02643 423 aa16.39■□□□□ 0.21
PARP1-209ENST00000498787 COG2Q14746 738 aa16.39■□□□□ 0.21
PARP1-209ENST00000498787 E2F4Q16254 413 aa16.39■□□□□ 0.21
PARP1-209ENST00000498787 PRAMEF18Q5VWM3 479 aa16.39■□□□□ 0.21
PARP1-209ENST00000498787 USP49Q70CQ1 688 aa16.39■□□□□ 0.21
PARP1-209ENST00000498787 ARMC9Q7Z3E5 817 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms