RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 RGPD3A6NKT7 1758 aaPredicted RBP16.61■□□□□ 0.25
CHTOP-206ENST00000495554 RGPD4Q7Z3J3 1758 aa16.61■□□□□ 0.25
CHTOP-206ENST00000495554 ZNF646O15015 1829 aaPredicted RBP16.6■□□□□ 0.25
CHTOP-206ENST00000495554 PSMA7O14818 248 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 PLCG1P19174 1290 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 CASQ1P31415 396 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 HDLBPQ00341 1268 aaKnown RBP16.6■□□□□ 0.25
CHTOP-206ENST00000495554 DESI2Q9BSY9 194 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 VPS16Q9H269 839 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 BIN2Q9UBW5 565 aaPredicted RBP16.6■□□□□ 0.25
CHTOP-206ENST00000495554 MYH8P13535 1937 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 DDTLA6NHG4 134 aaPredicted RBP16.6■□□□□ 0.25
CHTOP-206ENST00000495554 FECHP22830 423 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 MTF1Q14872 753 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 AOC3Q16853 763 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 SH3BP5LQ7L8J4 393 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 CCDC47Q96A33 483 aaKnown RBP16.6■□□□□ 0.25
CHTOP-206ENST00000495554 IDI2Q9BXS1 227 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 GTPBP4Q9BZE4 634 aaKnown RBP16.6■□□□□ 0.25
CHTOP-206ENST00000495554 PDGFDQ9GZP0 370 aaPredicted RBP16.6■□□□□ 0.25
CHTOP-206ENST00000495554 EHD4Q9H223 541 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 TAB2Q9NYJ8 693 aa16.6■□□□□ 0.25
CHTOP-206ENST00000495554 FXR1P51114 621 aaKnown RBP eCLIP16.59■□□□□ 0.25
CHTOP-206ENST00000495554 ERCC6LQ2NKX8 1250 aa16.59■□□□□ 0.25
CHTOP-206ENST00000495554 JAKMIP3Q5VZ66 844 aa16.59■□□□□ 0.25
CHTOP-206ENST00000495554 ADGRG1Q9Y653 693 aa16.59■□□□□ 0.25
CHTOP-206ENST00000495554 HLA-DOAP06340 250 aa16.59■□□□□ 0.25
CHTOP-206ENST00000495554 EEF1GP26641 437 aaKnown RBP16.59■□□□□ 0.25
CHTOP-206ENST00000495554 TECP42680 631 aa16.59■□□□□ 0.25
CHTOP-206ENST00000495554 TCP10Q12799 353 aa16.59■□□□□ 0.25
CHTOP-206ENST00000495554 RAD9BQ6WBX8 426 aa16.59■□□□□ 0.25
CHTOP-206ENST00000495554 IRF2BP1Q8IU81 584 aa16.59■□□□□ 0.25
CHTOP-206ENST00000495554 CREBRFQ8IUR6 639 aa16.59■□□□□ 0.25
CHTOP-206ENST00000495554 WDR24Q96S15 920 aa16.59■□□□□ 0.25
CHTOP-206ENST00000495554 THAP9Q9H5L6 903 aa16.59■□□□□ 0.25
CHTOP-206ENST00000495554 GREB1LQ9C091 1923 aaPredicted RBP16.58■□□□□ 0.25
CHTOP-206ENST00000495554 ADCY7P51828 1080 aa16.58■□□□□ 0.25
CHTOP-206ENST00000495554 AMPD3Q01432 767 aa16.58■□□□□ 0.25
CHTOP-206ENST00000495554 DMTNQ08495 405 aa16.58■□□□□ 0.25
CHTOP-206ENST00000495554 ZNF543Q08ER8 600 aa16.58■□□□□ 0.25
CHTOP-206ENST00000495554 SHROOM1Q2M3G4 852 aaPredicted RBP16.58■□□□□ 0.25
CHTOP-206ENST00000495554 MNS1Q8NEH6 495 aa16.58■□□□□ 0.25
CHTOP-206ENST00000495554 LRRC15Q8TF66 581 aa16.58■□□□□ 0.25
CHTOP-206ENST00000495554 DHTKD1Q96HY7 919 aaPredicted RBP16.58■□□□□ 0.25
CHTOP-206ENST00000495554 TRIM9Q9C026 710 aa16.58■□□□□ 0.25
CHTOP-206ENST00000495554 GPCPD1Q9NPB8 672 aa16.58■□□□□ 0.25
CHTOP-206ENST00000495554 TRIM49BA6NDI0 452 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 FAM196BA6NMK8 535 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 EDIL3O43854 480 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 CBX1P83916 185 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 TTBK2Q6IQ55 1244 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 FBXO38Q6PIJ6 1188 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 TMTC1Q8IUR5 882 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 LRRN4CLQ8ND94 238 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 NOC3LQ8WTT2 800 aaKnown RBP16.58■□□□□ 0.24
CHTOP-206ENST00000495554 COA7Q96BR5 231 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 CALML4Q96GE6 196 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 C7orf25Q9BPX7 421 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 MRPL44Q9H9J2 332 aaKnown RBP16.58■□□□□ 0.24
CHTOP-206ENST00000495554 JMJD4Q9H9V9 463 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 OGFRQ9NZT2 677 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 SIPA1L1O43166 1804 aa16.58■□□□□ 0.24
CHTOP-206ENST00000495554 C10orf71Q711Q0 1435 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 PPP1R2P41236 205 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 PMS1P54277 932 aaKnown RBP16.57■□□□□ 0.24
CHTOP-206ENST00000495554 UBXN1Q04323 297 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 PPP1R18Q6NYC8 613 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 NUP88Q99567 741 aaPredicted RBP16.57■□□□□ 0.24
CHTOP-206ENST00000495554 ABHD10Q9NUJ1 306 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 TMEM260Q9NX78 707 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 STK32BQ9NY57 414 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 YDJCA8MPS7 323 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 RBM5P52756 815 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHTOP-206ENST00000495554 MAP3K9P80192 1104 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 POTEDQ86YR6 584 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 UBXN4Q92575 508 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 KIFC2Q96AC6 838 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 TRIM47Q96LD4 638 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 CCDC17Q96LX7 622 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 MTMR9Q96QG7 549 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 DHX36Q9H2U1 1008 aaKnown RBP16.57■□□□□ 0.24
CHTOP-206ENST00000495554 EXOC1Q9NV70 894 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 DDX41Q9UJV9 622 aaKnown RBP16.57■□□□□ 0.24
CHTOP-206ENST00000495554 SERPINA10Q9UK55 444 aa16.57■□□□□ 0.24
CHTOP-206ENST00000495554 PNMA6FA0A0J9YX94 578 aa16.56■□□□□ 0.24
CHTOP-206ENST00000495554 EFCAB8A8MWE9 144 aa16.56■□□□□ 0.24
CHTOP-206ENST00000495554 MPHOSPH10O00566 681 aaKnown RBP16.56■□□□□ 0.24
CHTOP-206ENST00000495554 PPP1R11O60927 126 aaPredicted RBP16.56■□□□□ 0.24
CHTOP-206ENST00000495554 CALCRLQ16602 461 aa16.56■□□□□ 0.24
CHTOP-206ENST00000495554 TTI2Q6NXR4 508 aa16.56■□□□□ 0.24
CHTOP-206ENST00000495554 ADGRF4Q8IZF3 695 aa16.56■□□□□ 0.24
CHTOP-206ENST00000495554 MMTAG2Q9BU76 263 aaKnown RBP16.56■□□□□ 0.24
CHTOP-206ENST00000495554 MAGEC2Q9UBF1 373 aaPredicted RBP16.56■□□□□ 0.24
CHTOP-206ENST00000495554 A0A1W2PQC6 194 aa16.56■□□□□ 0.24
CHTOP-206ENST00000495554 BICDL2A1A5D9 508 aa16.56■□□□□ 0.24
CHTOP-206ENST00000495554 LGALS16A8MUM7 142 aa16.56■□□□□ 0.24
CHTOP-206ENST00000495554 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
CHTOP-206ENST00000495554 TXKP42681 527 aa16.56■□□□□ 0.24
CHTOP-206ENST00000495554 FXR2P51116 673 aaKnown RBP eCLIP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms