RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 PRC1O43663 620 aa17.55■□□□□ 0.4
USP39-217ENST00000491659 MAGEA10P43363 369 aaPredicted RBP17.55■□□□□ 0.4
USP39-217ENST00000491659 ACLYP53396 1101 aa17.55■□□□□ 0.4
USP39-217ENST00000491659 PDE4DQ08499 809 aa17.55■□□□□ 0.4
USP39-217ENST00000491659 NECTIN1Q15223 517 aa17.55■□□□□ 0.4
USP39-217ENST00000491659 TRIM60Q495X7 471 aa17.55■□□□□ 0.4
USP39-217ENST00000491659 C1orf53Q5VUE5 145 aa17.55■□□□□ 0.4
USP39-217ENST00000491659 DNERQ8NFT8 737 aa17.55■□□□□ 0.4
USP39-217ENST00000491659 IGDCC4Q8TDY8 1250 aa17.55■□□□□ 0.4
USP39-217ENST00000491659 GDF15Q99988 308 aa17.55■□□□□ 0.4
USP39-217ENST00000491659 AMNQ9BXJ7 453 aa17.55■□□□□ 0.4
USP39-217ENST00000491659 STARD7Q9NQZ5 370 aa17.55■□□□□ 0.4
USP39-217ENST00000491659 ZBTB5O15062 677 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 DDAH1O94760 285 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 TROAPQ12815 778 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 TRAF1Q13077 416 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 KCNA10Q16322 511 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 IQSEC1Q6DN90 963 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 TLK2Q86UE8 772 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 HOMER1Q86YM7 354 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 ZNF654Q8IZM8 581 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 TMEM87BQ96K49 555 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 GLT1D1Q96MS3 346 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 LBHD1Q9BQE6 289 aaPredicted RBP17.54■□□□□ 0.4
USP39-217ENST00000491659 AP5M1Q9H0R1 490 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 LY9Q9HBG7 655 aa17.54■□□□□ 0.4
USP39-217ENST00000491659 PRDM5Q9NQX1 630 aaPredicted RBP17.54■□□□□ 0.4
USP39-217ENST00000491659 TRIOBPQ9H2D6 2365 aa17.53■□□□□ 0.4
USP39-217ENST00000491659 CCDC69A6NI79 296 aa17.53■□□□□ 0.4
USP39-217ENST00000491659 SMPD1P17405 629 aa17.53■□□□□ 0.4
USP39-217ENST00000491659 KIF5BP33176 963 aa17.53■□□□□ 0.4
USP39-217ENST00000491659 BMP8BP34820 402 aa17.53■□□□□ 0.4
USP39-217ENST00000491659 FXR1P51114 621 aaKnown RBP eCLIP17.53■□□□□ 0.4
USP39-217ENST00000491659 GNASQ5JWF2 1037 aa17.53■□□□□ 0.4
USP39-217ENST00000491659 CCSAPQ6IQ19 270 aaPredicted RBP17.53■□□□□ 0.4
USP39-217ENST00000491659 TAPT1Q6NXT6 567 aa17.53■□□□□ 0.4
USP39-217ENST00000491659 NFXL1Q6ZNB6 911 aa17.53■□□□□ 0.4
USP39-217ENST00000491659 CTCFLQ8NI51 663 aaPredicted RBP17.53■□□□□ 0.4
USP39-217ENST00000491659 MTMR8Q96EF0 704 aa17.53■□□□□ 0.4
USP39-217ENST00000491659 PDGFCQ9NRA1 345 aa17.53■□□□□ 0.4
USP39-217ENST00000491659 GNEQ9Y223 722 aaKnown RBP17.53■□□□□ 0.4
USP39-217ENST00000491659 SH2B2O14492 632 aaPredicted RBP17.52■□□□□ 0.4
USP39-217ENST00000491659 ASGR1P07306 291 aa17.52■□□□□ 0.4
USP39-217ENST00000491659 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.4
USP39-217ENST00000491659 TMTC2Q8N394 836 aa17.52■□□□□ 0.4
USP39-217ENST00000491659 MAP3K14Q99558 947 aa17.52■□□□□ 0.4
USP39-217ENST00000491659 UBE2OQ9C0C9 1292 aaKnown RBP17.52■□□□□ 0.4
USP39-217ENST00000491659 RIOX1Q9H6W3 641 aa17.52■□□□□ 0.4
USP39-217ENST00000491659 Q9Y3F1 56 aa17.52■□□□□ 0.4
USP39-217ENST00000491659 KIAA1217Q5T5P2 1943 aa17.52■□□□□ 0.4
USP39-217ENST00000491659 ELP1O95163 1332 aa17.51■□□□□ 0.39
USP39-217ENST00000491659 ZEB2O60315 1214 aa17.51■□□□□ 0.39
USP39-217ENST00000491659 PQBP1O60828 265 aaKnown RBP17.51■□□□□ 0.39
USP39-217ENST00000491659 EDNRBP24530 442 aa17.51■□□□□ 0.39
USP39-217ENST00000491659 NKX3-2P78367 333 aa17.51■□□□□ 0.39
USP39-217ENST00000491659 IRX5P78411 483 aaPredicted RBP17.51■□□□□ 0.39
USP39-217ENST00000491659 BEX3Q00994 111 aa17.51■□□□□ 0.39
USP39-217ENST00000491659 TLE2Q04725 743 aa17.51■□□□□ 0.39
USP39-217ENST00000491659 FSCN1Q16658 493 aaKnown RBP17.51■□□□□ 0.39
USP39-217ENST00000491659 SYTL5Q8TDW5 730 aaPredicted RBP17.51■□□□□ 0.39
USP39-217ENST00000491659 VTI1AQ96AJ9 217 aa17.51■□□□□ 0.39
USP39-217ENST00000491659 PIGSQ96S52 555 aa17.51■□□□□ 0.39
USP39-217ENST00000491659 MYL10Q9BUA6 226 aa17.51■□□□□ 0.39
USP39-217ENST00000491659 PDLIM7Q9NR12 457 aa17.51■□□□□ 0.39
USP39-217ENST00000491659 PCDHA1Q9Y5I3 950 aa17.51■□□□□ 0.39
USP39-217ENST00000491659 BAZ2BQ9UIF8 2168 aaKnown RBP17.5■□□□□ 0.39
USP39-217ENST00000491659 MROH7Q68CQ1 1323 aa17.5■□□□□ 0.39
USP39-217ENST00000491659 A0A0U1RQG5 324 aaPredicted RBP17.5■□□□□ 0.39
USP39-217ENST00000491659 DYNC1LI2O43237 492 aaPredicted RBP17.5■□□□□ 0.39
USP39-217ENST00000491659 PPP1R11O60927 126 aaPredicted RBP17.5■□□□□ 0.39
USP39-217ENST00000491659 CFBP00751 764 aa17.5■□□□□ 0.39
USP39-217ENST00000491659 CENPBP07199 599 aaPredicted RBP17.5■□□□□ 0.39
USP39-217ENST00000491659 CLTBP09497 229 aa17.5■□□□□ 0.39
USP39-217ENST00000491659 LIFRP42702 1097 aa17.5■□□□□ 0.39
USP39-217ENST00000491659 PPP2R5BQ15173 497 aa17.5■□□□□ 0.39
USP39-217ENST00000491659 DUSP28Q4G0W2 176 aa17.5■□□□□ 0.39
USP39-217ENST00000491659 NSUN6Q8TEA1 469 aaKnown RBP17.5■□□□□ 0.39
USP39-217ENST00000491659 SCFD2Q8WU76 684 aa17.5■□□□□ 0.39
USP39-217ENST00000491659 TBC1D5Q92609 795 aa17.5■□□□□ 0.39
USP39-217ENST00000491659 NEK1Q96PY6 1258 aa17.5■□□□□ 0.39
USP39-217ENST00000491659 WDR11Q9BZH6 1224 aa17.5■□□□□ 0.39
USP39-217ENST00000491659 GPHNQ9NQX3 736 aaPredicted RBP17.5■□□□□ 0.39
USP39-217ENST00000491659 PNMA6FA0A0J9YX94 578 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 RBM47A0AV96 593 aaKnown RBP17.49■□□□□ 0.39
USP39-217ENST00000491659 CTAGE5O15320 804 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 CALM1P0DP23 149 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 CALM2P0DP24 149 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 CALM3P0DP25 149 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 GNAQP50148 359 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 KRT32Q14532 448 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 SLC35G1Q2M3R5 365 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 ARHGEF16Q5VV41 709 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 TDHQ8IZJ6 230 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 TAAR1Q96RJ0 339 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 RMDN3Q96TC7 470 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 LZTS2Q9BRK4 669 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 MAP3K20Q9NYL2 800 aaKnown RBP17.49■□□□□ 0.39
USP39-217ENST00000491659 COL20A1Q9P218 1284 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 PCDH10Q9P2E7 1040 aa17.49■□□□□ 0.39
USP39-217ENST00000491659 SLC12A7Q9Y666 1083 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms