RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CNPY2Q9Y2B0 182 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 LCTP09848 1927 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 SMCHD1A6NHR9 2005 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 LRRC37A2A6NM11 1700 aa12.8□□□□□ -0.36
CPSF7-212ENST00000489728 PTPDC1A2A3K4 754 aa12.8□□□□□ -0.36
CPSF7-212ENST00000489728 CYP2C19P33261 490 aa12.8□□□□□ -0.36
CPSF7-212ENST00000489728 SLC30A10Q6XR72 485 aa12.8□□□□□ -0.36
CPSF7-212ENST00000489728 CRISPLD2Q9H0B8 497 aa12.8□□□□□ -0.36
CPSF7-212ENST00000489728 ABHD16BQ9H3Z7 469 aa12.8□□□□□ -0.36
CPSF7-212ENST00000489728 NAP1L2Q9ULW6 460 aaPredicted RBP12.8□□□□□ -0.36
CPSF7-212ENST00000489728 SOWAHBA6NEL2 793 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 PIK3CDO00329 1044 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 OPLAHO14841 1288 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 SEPT4O43236 478 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 SGPL1O95470 568 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 IFNAR1P17181 557 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 EDNRBP24530 442 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 CDC27P30260 824 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 RGS19P49795 217 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 ALDH5A1P51649 535 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-212ENST00000489728 CNTN2Q02246 1040 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 TRIM32Q13049 653 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 CPLX2Q6PUV4 134 aaKnown RBP12.79□□□□□ -0.36
CPSF7-212ENST00000489728 ARMCX2Q7L311 632 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 RAB11FIP4Q86YS3 637 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 FAM177A1Q8N128 213 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-212ENST00000489728 ANKLE1Q8NAG6 615 aa12.79□□□□□ -0.36
CPSF7-212ENST00000489728 U2AF1L4Q8WU68 220 aaKnown RBP12.79□□□□□ -0.36
CPSF7-212ENST00000489728 RNF26Q9BY78 433 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-212ENST00000489728 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-212ENST00000489728 BAZ2BQ9UIF8 2168 aaKnown RBP12.79□□□□□ -0.36
CPSF7-212ENST00000489728 FRMPD3Q5JV73 1810 aa12.78□□□□□ -0.36
CPSF7-212ENST00000489728 GCOM1H8Y6P7 765 aaPredicted RBP12.78□□□□□ -0.36
CPSF7-212ENST00000489728 PRPF3O43395 683 aaKnown RBP12.78□□□□□ -0.36
CPSF7-212ENST00000489728 CDKL5O76039 1030 aa12.78□□□□□ -0.36
CPSF7-212ENST00000489728 POLR2MP0CAP2 368 aa12.78□□□□□ -0.36
CPSF7-212ENST00000489728 TAL1P17542 331 aaPredicted RBP12.78□□□□□ -0.36
CPSF7-212ENST00000489728 CALML3P27482 149 aa12.78□□□□□ -0.36
CPSF7-212ENST00000489728 ADD1P35611 737 aaKnown RBP12.78□□□□□ -0.36
CPSF7-212ENST00000489728 NEK4P51957 841 aa12.78□□□□□ -0.36
CPSF7-212ENST00000489728 AK2P54819 239 aa12.78□□□□□ -0.36
CPSF7-212ENST00000489728 NTRK3Q16288 839 aa12.78□□□□□ -0.36
CPSF7-212ENST00000489728 SYTL5Q8TDW5 730 aaPredicted RBP12.78□□□□□ -0.36
CPSF7-212ENST00000489728 NSUN6Q8TEA1 469 aaKnown RBP12.78□□□□□ -0.36
CPSF7-212ENST00000489728 IWS1Q96ST2 819 aa12.78□□□□□ -0.36
CPSF7-212ENST00000489728 GLT8D2Q9H1C3 349 aa12.78□□□□□ -0.36
CPSF7-212ENST00000489728 VTA1Q9NP79 307 aa12.78□□□□□ -0.36
CPSF7-212ENST00000489728 DDX20Q9UHI6 824 aaKnown RBP12.78□□□□□ -0.36
CPSF7-212ENST00000489728 BRCA2P51587 3418 aa12.78□□□□□ -0.36
CPSF7-212ENST00000489728 ASTN1O14525 1302 aa12.78□□□□□ -0.36
CPSF7-212ENST00000489728 CPLX1O14810 134 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 PFKFB2O60825 505 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 SNAI1O95863 264 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-212ENST00000489728 CFBP00751 764 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 ZNF865P0CJ78 1059 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-212ENST00000489728 AKR1A1P14550 325 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 CCND3P30281 292 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-212ENST00000489728 SOX10P56693 466 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 ACVR2BQ13705 512 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 RABEP1Q15276 862 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 PFKFB3Q16875 520 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-212ENST00000489728 TRIM22Q8IYM9 498 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 CMTR1Q8N1G2 835 aaKnown RBP12.77□□□□□ -0.37
CPSF7-212ENST00000489728 TRPV1Q8NER1 839 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 CCDC12Q8WUD4 166 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-212ENST00000489728 CUL5Q93034 780 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 TBC1D32Q96NH3 1257 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 DEFB118Q96PH6 123 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 KIF2CQ99661 725 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 BACH2Q9BYV9 841 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 KATNBL1Q9H079 304 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 SLKQ9H2G2 1235 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-212ENST00000489728 BARHL2Q9NY43 387 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 OGDHLQ9ULD0 1010 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 V9GY48 417 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-212ENST00000489728 FRMPD4Q14CM0 1322 aa12.77□□□□□ -0.37
CPSF7-212ENST00000489728 KIAA0100Q14667 2235 aaKnown RBP12.77□□□□□ -0.37
CPSF7-212ENST00000489728 ESYT2A0FGR8 921 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 POTEFA5A3E0 1075 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 SCG2P13521 617 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 AKAP17AQ02040 695 aaKnown RBP12.76□□□□□ -0.37
CPSF7-212ENST00000489728 LHX8Q68G74 356 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 WWC2Q6AWC2 1192 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 MCTP2Q6DN12 878 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 HEATR3Q7Z4Q2 680 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 CCDC82Q8N4S0 544 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 PIBF1Q8WXW3 757 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 SHISA4Q96DD7 197 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 RMDN3Q96TC7 470 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 PSTPIP2Q9H939 334 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 FAM184BQ9ULE4 1060 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 TPCN1Q9ULQ1 816 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 MCM3APO60318 1980 aa12.76□□□□□ -0.37
CPSF7-212ENST00000489728 STXBP3O00186 592 aa12.75□□□□□ -0.37
CPSF7-212ENST00000489728 STAM2O75886 525 aa12.75□□□□□ -0.37
CPSF7-212ENST00000489728 MYCP01106 439 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-212ENST00000489728 RARBP10826 455 aa12.75□□□□□ -0.37
CPSF7-212ENST00000489728 CNGA1P29973 690 aa12.75□□□□□ -0.37
CPSF7-212ENST00000489728 PDE4DQ08499 809 aa12.75□□□□□ -0.37
CPSF7-212ENST00000489728 ARHGEF16Q5VV41 709 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms