RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 MCF2L2Q86YR7 1114 aa14.62□□□□□ -0.07
TOP3A-206ENST00000489131 KRI1Q8N9T8 703 aaKnown RBP14.62□□□□□ -0.07
TOP3A-206ENST00000489131 TBCKQ8TEA7 893 aa14.62□□□□□ -0.07
TOP3A-206ENST00000489131 WNK4Q96J92 1243 aa14.62□□□□□ -0.07
TOP3A-206ENST00000489131 CCPG1Q9ULG6 757 aa14.62□□□□□ -0.07
TOP3A-206ENST00000489131 CYP3A4P08684 503 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 CIITAP33076 1130 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 PTGDRQ13258 359 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 PABPC4Q13310 644 aaKnown RBP eCLIP14.61□□□□□ -0.071e-10■■□□□ 14.2
TOP3A-206ENST00000489131 UBE2SQ16763 222 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 RESP18Q5W5W9 173 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 GPAT2Q6NUI2 795 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 CCDC174Q6PII3 467 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 USP17L6PQ6QN14 398 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 ENGASEQ8NFI3 743 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 MRPS27Q92552 414 aaKnown RBP14.61□□□□□ -0.07
TOP3A-206ENST00000489131 SYAP1Q96A49 352 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-206ENST00000489131 MS4A4AQ96JQ5 239 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 AGBL1Q96MI9 1066 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 P2RX7Q99572 595 aaKnown RBP14.61□□□□□ -0.07
TOP3A-206ENST00000489131 ANO3Q9BYT9 981 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 HPSEQ9Y251 543 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 RABGAP1Q9Y3P9 1069 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 SMCHD1A6NHR9 2005 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 FRMPD4Q14CM0 1322 aa14.61□□□□□ -0.07
TOP3A-206ENST00000489131 MYH7BA7E2Y1 1941 aa14.6□□□□□ -0.07
TOP3A-206ENST00000489131 GCOM1H8Y6P7 765 aaPredicted RBP14.6□□□□□ -0.07
TOP3A-206ENST00000489131 POLR2MP0CAP2 368 aa14.6□□□□□ -0.07
TOP3A-206ENST00000489131 GTF2A2P52657 109 aa14.6□□□□□ -0.07
TOP3A-206ENST00000489131 FAM160A1Q05DH4 1040 aa14.6□□□□□ -0.07
TOP3A-206ENST00000489131 SNW1Q13573 536 aaKnown RBP14.6□□□□□ -0.07
TOP3A-206ENST00000489131 ZNF174Q15697 407 aa14.6□□□□□ -0.07
TOP3A-206ENST00000489131 GTF3C2Q8WUA4 911 aaPredicted RBP14.6□□□□□ -0.07
TOP3A-206ENST00000489131 TEX13BQ9BXU2 312 aa14.6□□□□□ -0.07
TOP3A-206ENST00000489131 RAVER2Q9HCJ3 691 aaKnown RBP14.6□□□□□ -0.07
TOP3A-206ENST00000489131 DDX19AQ9NUU7 478 aaKnown RBP14.6□□□□□ -0.07
TOP3A-206ENST00000489131 TMEM63CQ9P1W3 806 aa14.6□□□□□ -0.07
TOP3A-206ENST00000489131 RPTORQ8N122 1335 aa14.6□□□□□ -0.07
TOP3A-206ENST00000489131 TESPA1A2RU30 521 aaPredicted RBP14.59□□□□□ -0.07
TOP3A-206ENST00000489131 SPDYE3A6NKU9 549 aa14.59□□□□□ -0.07
TOP3A-206ENST00000489131 KIF3CO14782 793 aa14.59□□□□□ -0.07
TOP3A-206ENST00000489131 CETPP11597 493 aa14.59□□□□□ -0.07
TOP3A-206ENST00000489131 LIG1P18858 919 aa14.59□□□□□ -0.07
TOP3A-206ENST00000489131 MARCKSP29966 332 aaPredicted RBP14.59□□□□□ -0.07
TOP3A-206ENST00000489131 MCM7P33993 719 aa14.59□□□□□ -0.07
TOP3A-206ENST00000489131 TMEM132BQ14DG7 1078 aa14.59□□□□□ -0.07
TOP3A-206ENST00000489131 SPRYD7Q5W111 196 aa14.59□□□□□ -0.07
TOP3A-206ENST00000489131 SHC4Q6S5L8 630 aa14.59□□□□□ -0.07
TOP3A-206ENST00000489131 POTEEQ6S8J3 1075 aa14.59□□□□□ -0.07
TOP3A-206ENST00000489131 CCAR1Q8IX12 1150 aaKnown RBP14.59□□□□□ -0.07
TOP3A-206ENST00000489131 FMR1NBQ8N0W7 255 aaPredicted RBP14.59□□□□□ -0.07
TOP3A-206ENST00000489131 MTMR9Q96QG7 549 aa14.59□□□□□ -0.07
TOP3A-206ENST00000489131 ASCC2Q9H1I8 757 aaPredicted RBP14.59□□□□□ -0.07
TOP3A-206ENST00000489131 ZNF408Q9H9D4 720 aa14.59□□□□□ -0.07
TOP3A-206ENST00000489131 NEMFO60524 1076 aa14.58□□□□□ -0.08
TOP3A-206ENST00000489131 ARHGAP4P98171 946 aa14.58□□□□□ -0.08
TOP3A-206ENST00000489131 LETM2Q2VYF4 491 aa14.58□□□□□ -0.08
TOP3A-206ENST00000489131 CCDC183Q5T5S1 534 aa14.58□□□□□ -0.08
TOP3A-206ENST00000489131 GADL1Q6ZQY3 521 aa14.58□□□□□ -0.08
TOP3A-206ENST00000489131 CCDC73Q6ZRK6 1079 aa14.58□□□□□ -0.08
TOP3A-206ENST00000489131 RBM43Q6ZSC3 357 aaKnown RBP14.58□□□□□ -0.08
TOP3A-206ENST00000489131 ANKRD23Q86SG2 305 aa14.58□□□□□ -0.08
TOP3A-206ENST00000489131 RIOX2Q8IUF8 465 aa14.58□□□□□ -0.08
TOP3A-206ENST00000489131 ELOA2Q8IYF1 753 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-206ENST00000489131 FSIP1Q8NA03 581 aa14.58□□□□□ -0.08
TOP3A-206ENST00000489131 ZNF526Q8TF50 670 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-206ENST00000489131 TIGD1Q96MW7 591 aa14.58□□□□□ -0.08
TOP3A-206ENST00000489131 GOLPH3LQ9H4A5 285 aa14.58□□□□□ -0.08
TOP3A-206ENST00000489131 EHMT1Q9H9B1 1298 aa14.58□□□□□ -0.08
TOP3A-206ENST00000489131 GPBP1L1Q9HC44 474 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-206ENST00000489131 CTDP1Q9Y5B0 961 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-206ENST00000489131 NFIBO00712 420 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 TBX3O15119 743 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 CCNT1O60563 726 aaKnown RBP14.57□□□□□ -0.08
TOP3A-206ENST00000489131 LETM1O95202 739 aaPredicted RBP14.57□□□□□ -0.08
TOP3A-206ENST00000489131 OR52Z1P0C646 297 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 TAL1P17542 331 aaPredicted RBP14.57□□□□□ -0.08
TOP3A-206ENST00000489131 ATP2B1P20020 1258 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 OSBPP22059 807 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 COPB2P35606 906 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 LONP1P36776 959 aaKnown RBP14.57□□□□□ -0.08
TOP3A-206ENST00000489131 ZNF445P59923 1031 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 HERVK_113P62684 666 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 IRX3P78415 501 aaPredicted RBP14.57□□□□□ -0.08
TOP3A-206ENST00000489131 Q4G0T1 1027 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 CAVIN1Q6NZI2 390 aaKnown RBP14.57□□□□□ -0.08
TOP3A-206ENST00000489131 CHST13Q8NET6 341 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 HHIPL1Q96JK4 782 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 TMEM60Q9H2L4 133 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 ZCCHC17Q9NP64 241 aaKnown RBP14.57□□□□□ -0.08
TOP3A-206ENST00000489131 DACT1Q9NYF0 836 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 PNMA3Q9UL41 463 aa14.57□□□□□ -0.08
TOP3A-206ENST00000489131 NR1I2O75469 434 aa14.56□□□□□ -0.08
TOP3A-206ENST00000489131 CFBP00751 764 aa14.56□□□□□ -0.08
TOP3A-206ENST00000489131 ALAS1P13196 640 aa14.56□□□□□ -0.08
TOP3A-206ENST00000489131 PFKFB1P16118 471 aa14.56□□□□□ -0.08
TOP3A-206ENST00000489131 STAT3P40763 770 aa14.56□□□□□ -0.08
TOP3A-206ENST00000489131 GRIN1Q05586 938 aa14.56□□□□□ -0.08
TOP3A-206ENST00000489131 IL17AQ16552 155 aa14.56□□□□□ -0.08
TOP3A-206ENST00000489131 ZSCAN23Q3MJ62 389 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms