RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PHAXQ9H814 394 aaKnown RBP7.35□□□□□ -1.23
SMC4-219ENST00000487747 RTEL1Q9NZ71 1219 aa7.35□□□□□ -1.23
SMC4-219ENST00000487747 CGGBP1Q9UFW8 167 aaPredicted RBP7.35□□□□□ -1.23
SMC4-219ENST00000487747 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.35□□□□□ -1.23
SMC4-219ENST00000487747 GLI4P10075 376 aa7.34□□□□□ -1.23
SMC4-219ENST00000487747 NASPP49321 788 aaPredicted RBP7.34□□□□□ -1.23
SMC4-219ENST00000487747 CORO7P57737 925 aa7.34□□□□□ -1.23
SMC4-219ENST00000487747 PPP2R5EQ16537 467 aa7.34□□□□□ -1.23
SMC4-219ENST00000487747 CPNE8Q86YQ8 564 aa7.34□□□□□ -1.23
SMC4-219ENST00000487747 ZNF513Q8N8E2 541 aaPredicted RBP7.34□□□□□ -1.23
SMC4-219ENST00000487747 C19orf47Q8N9M1 422 aaKnown RBP7.34□□□□□ -1.23
SMC4-219ENST00000487747 KIAA1522Q9P206 1035 aaPredicted RBP7.34□□□□□ -1.23
SMC4-219ENST00000487747 RWDD3Q9Y3V2 267 aa7.34□□□□□ -1.23
SMC4-219ENST00000487747 A0A1B0GTL3 188 aa7.33□□□□□ -1.24
SMC4-219ENST00000487747 GJA8P48165 433 aa7.33□□□□□ -1.24
SMC4-219ENST00000487747 FOXO4P98177 505 aa7.33□□□□□ -1.24
SMC4-219ENST00000487747 EEF1DP3Q658K8 133 aa7.33□□□□□ -1.24
SMC4-219ENST00000487747 ARHGEF39Q8N4T4 335 aa7.33□□□□□ -1.24
SMC4-219ENST00000487747 APEX2Q9UBZ4 518 aa7.33□□□□□ -1.24
SMC4-219ENST00000487747 C2orf71A6NGG8 1288 aa7.32□□□□□ -1.24
SMC4-219ENST00000487747 UNCXA6NJT0 531 aa7.32□□□□□ -1.24
SMC4-219ENST00000487747 ASGR2P07307 311 aa7.32□□□□□ -1.24
SMC4-219ENST00000487747 PFKLP17858 780 aa7.32□□□□□ -1.24
SMC4-219ENST00000487747 VWA3BQ502W6 1294 aa7.32□□□□□ -1.24
SMC4-219ENST00000487747 KIAA1211LQ6NV74 962 aa7.32□□□□□ -1.24
SMC4-219ENST00000487747 FNIP1Q8TF40 1166 aa7.32□□□□□ -1.24
SMC4-219ENST00000487747 MRRFQ96E11 262 aaKnown RBP7.32□□□□□ -1.24
SMC4-219ENST00000487747 SPATA32Q96LK8 384 aa7.32□□□□□ -1.24
SMC4-219ENST00000487747 GBP3Q9H0R5 595 aa7.32□□□□□ -1.24
SMC4-219ENST00000487747 GULP1Q9UBP9 304 aa7.32□□□□□ -1.24
SMC4-219ENST00000487747 SLC12A7Q9Y666 1083 aa7.32□□□□□ -1.24
SMC4-219ENST00000487747 PPM1BO75688 479 aa7.31□□□□□ -1.24
SMC4-219ENST00000487747 SEPHS1P49903 392 aa7.31□□□□□ -1.24
SMC4-219ENST00000487747 SKOR2Q2VWA4 1001 aaPredicted RBP7.31□□□□□ -1.24
SMC4-219ENST00000487747 MTA3Q9BTC8 594 aa7.31□□□□□ -1.24
SMC4-219ENST00000487747 LGR4Q9BXB1 951 aa7.31□□□□□ -1.24
SMC4-219ENST00000487747 ACBD3Q9H3P7 528 aa7.31□□□□□ -1.24
SMC4-219ENST00000487747 LUC7LQ9NQ29 371 aaKnown RBP7.31□□□□□ -1.24
SMC4-219ENST00000487747 DBR1Q9UK59 544 aaKnown RBP7.31□□□□□ -1.24
SMC4-219ENST00000487747 BACE2Q9Y5Z0 518 aa7.31□□□□□ -1.24
SMC4-219ENST00000487747 SLURP1P55000 103 aa7.3□□□□□ -1.24
SMC4-219ENST00000487747 AMPD2Q01433 879 aa7.3□□□□□ -1.24
SMC4-219ENST00000487747 TARBP2Q15633 366 aaKnown RBP7.3□□□□□ -1.24
SMC4-219ENST00000487747 MBLAC2Q68D91 279 aa7.3□□□□□ -1.24
SMC4-219ENST00000487747 SP8Q8IXZ3 490 aa7.3□□□□□ -1.24
SMC4-219ENST00000487747 LZTR1Q8N653 840 aa7.3□□□□□ -1.24
SMC4-219ENST00000487747 RGS22Q8NE09 1264 aa7.3□□□□□ -1.24
SMC4-219ENST00000487747 OR6P1Q8NGX9 317 aa7.3□□□□□ -1.24
SMC4-219ENST00000487747 ZNF526Q8TF50 670 aaPredicted RBP7.3□□□□□ -1.24
SMC4-219ENST00000487747 RCC1LQ96I51 464 aaKnown RBP7.3□□□□□ -1.24
SMC4-219ENST00000487747 SUGT1Q9Y2Z0 365 aa7.3□□□□□ -1.24
SMC4-219ENST00000487747 SYN1P17600 705 aa7.29□□□□□ -1.24
SMC4-219ENST00000487747 PMLP29590 882 aa7.29□□□□□ -1.24
SMC4-219ENST00000487747 CASP7P55210 303 aa7.29□□□□□ -1.24
SMC4-219ENST00000487747 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
SMC4-219ENST00000487747 HTRA3P83110 453 aa7.29□□□□□ -1.24
SMC4-219ENST00000487747 VHLLQ6RSH7 139 aa7.29□□□□□ -1.24
SMC4-219ENST00000487747 CXorf38Q8TB03 319 aa7.29□□□□□ -1.24
SMC4-219ENST00000487747 ALG3Q92685 438 aa7.29□□□□□ -1.24
SMC4-219ENST00000487747 GPRC5CQ9NQ84 441 aa7.29□□□□□ -1.24
SMC4-219ENST00000487747 SIT1Q9Y3P8 196 aa7.29□□□□□ -1.24
SMC4-219ENST00000487747 C7orf72A4D263 438 aa7.28□□□□□ -1.24
SMC4-219ENST00000487747 DLX2Q07687 328 aaPredicted RBP7.28□□□□□ -1.24
SMC4-219ENST00000487747 CPLX3Q8WVH0 158 aa7.28□□□□□ -1.24
SMC4-219ENST00000487747 CLEC1BQ9P126 229 aa7.28□□□□□ -1.24
SMC4-219ENST00000487747 NPHP3-ACAD11A0A0J9YXS1 232 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 PRICKLE3O43900 615 aaPredicted RBP7.27□□□□□ -1.25
SMC4-219ENST00000487747 KCNH1O95259 989 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 NCAM1P13591 858 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 PAMP19021 973 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 CAP1Q01518 475 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 GRB10Q13322 594 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 DPF3Q92784 378 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 NOX5Q96PH1 765 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 SYT3Q9BQG1 590 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 SPATA25Q9BR10 227 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 RNF38Q9H0F5 515 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 AKT3Q9Y243 479 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 FAN1Q9Y2M0 1017 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 PMF1-BGLAPU3KQ54 211 aa7.27□□□□□ -1.25
SMC4-219ENST00000487747 ANKRD34BA5PLL1 514 aa7.26□□□□□ -1.25
SMC4-219ENST00000487747 PLS3P13797 630 aa7.26□□□□□ -1.25
SMC4-219ENST00000487747 KCNC1P48547 511 aa7.26□□□□□ -1.25
SMC4-219ENST00000487747 CYP4F3Q08477 520 aa7.26□□□□□ -1.25
SMC4-219ENST00000487747 LIPIQ6XZB0 460 aa7.26□□□□□ -1.25
SMC4-219ENST00000487747 B3GNT8Q7Z7M8 397 aa7.26□□□□□ -1.25
SMC4-219ENST00000487747 SAPCD2Q86UD0 394 aa7.26□□□□□ -1.25
SMC4-219ENST00000487747 NLGN1Q8N2Q7 840 aa7.26□□□□□ -1.25
SMC4-219ENST00000487747 COPS5Q92905 334 aa7.26□□□□□ -1.25
SMC4-219ENST00000487747 ANAPC16Q96DE5 110 aa7.26□□□□□ -1.25
SMC4-219ENST00000487747 TSPAN17Q96FV3 270 aa7.26□□□□□ -1.25
SMC4-219ENST00000487747 EMC9Q9Y3B6 208 aa7.26□□□□□ -1.25
SMC4-219ENST00000487747 FUCA1P04066 466 aa7.25□□□□□ -1.25
SMC4-219ENST00000487747 NTRK1P04629 796 aa7.25□□□□□ -1.25
SMC4-219ENST00000487747 SCRN1Q12765 414 aa7.25□□□□□ -1.25
SMC4-219ENST00000487747 PLEKHO2Q8TD55 490 aa7.25□□□□□ -1.25
SMC4-219ENST00000487747 SEC16BQ96JE7 1060 aa7.25□□□□□ -1.25
SMC4-219ENST00000487747 TEPSINQ96N21 525 aa7.25□□□□□ -1.25
SMC4-219ENST00000487747 SH3D21A4FU49 640 aa7.24□□□□□ -1.25
SMC4-219ENST00000487747 INF2Q27J81 1249 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms