RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 PPIGQ13427 754 aaKnown RBP eCLIP10.09□□□□□ -0.79
PRKCB-208ENST00000487674 ALX1Q15699 326 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 CCDC96Q2M329 555 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 VPS53Q5VIR6 699 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 MFSD5Q6N075 450 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 CCDC174Q6PII3 467 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 RASGRP2Q7LDG7 609 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 TLK2Q86UE8 772 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 TICAM2Q86XR7 235 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 FAM126BQ8IXS8 530 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 DCAF4Q8WV16 495 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 HELLSQ9NRZ9 838 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 CYP39A1Q9NYL5 469 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 CCPG1Q9ULG6 757 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 PRR12Q9ULL5 1215 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 LAMA4Q16363 1823 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 A0A0C4DFX4 3053 aa10.09□□□□□ -0.79
PRKCB-208ENST00000487674 UNC80Q8N2C7 3258 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.08□□□□□ -0.8
PRKCB-208ENST00000487674 CABYRO75952 493 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 ICAM1P05362 532 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 FGRP09769 529 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 FOSL2P15408 326 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 DNAJB2P25686 324 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 PDE1AP54750 535 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 HDAC1Q13547 482 aaPredicted RBP10.08□□□□□ -0.8
PRKCB-208ENST00000487674 FSCN1Q16658 493 aaKnown RBP10.08□□□□□ -0.8
PRKCB-208ENST00000487674 MUM1L1Q5H9M0 696 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 ANKRD45Q5TZF3 282 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 PSRC1Q6PGN9 363 aaPredicted RBP10.08□□□□□ -0.8
PRKCB-208ENST00000487674 NOL8Q76FK4 1167 aaKnown RBP10.08□□□□□ -0.8
PRKCB-208ENST00000487674 TMEM199Q8N511 208 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 MYLIPQ8WY64 445 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 VTI1AQ96AJ9 217 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 CHMP4CQ96CF2 233 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.08□□□□□ -0.8
PRKCB-208ENST00000487674 COL25A1Q9BXS0 654 aaPredicted RBP10.08□□□□□ -0.8
PRKCB-208ENST00000487674 RANBP17Q9H2T7 1088 aaKnown RBP10.08□□□□□ -0.8
PRKCB-208ENST00000487674 INCENPQ9NQS7 918 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 GNEQ9Y223 722 aaKnown RBP10.08□□□□□ -0.8
PRKCB-208ENST00000487674 CDH23Q9H251 3354 aa10.08□□□□□ -0.8
PRKCB-208ENST00000487674 A0A0D9SFI3 127 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.07□□□□□ -0.8
PRKCB-208ENST00000487674 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.07□□□□□ -0.8
PRKCB-208ENST00000487674 CD4P01730 458 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 TOP1P11387 765 aaKnown RBP10.07□□□□□ -0.8
PRKCB-208ENST00000487674 SMPD1P17405 629 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 SNAP25P60880 206 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 BEX3Q00994 111 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 CXCL17Q6UXB2 119 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 BTNL9Q6UXG8 535 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 NSMFQ6X4W1 530 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 FBXO16Q8IX29 292 aaPredicted RBP10.07□□□□□ -0.8
PRKCB-208ENST00000487674 SLC43A3Q8NBI5 491 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 MORC4Q8TE76 937 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 FAM227BQ96M60 508 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 SEZ6LQ9BYH1 1024 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 AP5M1Q9H0R1 490 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 VTA1Q9NP79 307 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 TOMM22Q9NS69 142 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 MTMR7Q9Y216 660 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 Q9Y3F1 56 aa10.07□□□□□ -0.8
PRKCB-208ENST00000487674 LOC102724159A0A0B4J2E5 919 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 ZEB2O60315 1214 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 FGAP02671 866 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 PCP11498 1178 aaKnown RBP10.06□□□□□ -0.8
PRKCB-208ENST00000487674 CSF2RAP15509 400 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 PWP2Q15269 919 aaKnown RBP10.06□□□□□ -0.8
PRKCB-208ENST00000487674 MCMDC2Q4G0Z9 681 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 TMEM240Q5SV17 173 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 RASIP1Q5U651 963 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 SYDE2Q5VT97 1194 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 IQSEC1Q6DN90 963 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 TAPT1Q6NXT6 567 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 EEPD1Q7L9B9 569 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 TIFAQ96CG3 184 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 CRBNQ96SW2 442 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 TMEM47Q9BQJ4 181 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 PPP1R12CQ9BZL4 782 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 TCP11L1Q9NUJ3 509 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 ADD3Q9UEY8 706 aaKnown RBP10.06□□□□□ -0.8
PRKCB-208ENST00000487674 PNMA2Q9UL42 364 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 DDX49Q9Y6V7 483 aaKnown RBP10.06□□□□□ -0.8
PRKCB-208ENST00000487674 CCDC171Q6TFL3 1326 aa10.06□□□□□ -0.8
PRKCB-208ENST00000487674 NFIBO00712 420 aa10.05□□□□□ -0.8
PRKCB-208ENST00000487674 HSPD1P10809 573 aaKnown RBP10.05□□□□□ -0.8
PRKCB-208ENST00000487674 PDHBP11177 359 aa10.05□□□□□ -0.8
PRKCB-208ENST00000487674 SLC16A2P36021 539 aa10.05□□□□□ -0.8
PRKCB-208ENST00000487674 ALDH5A1P51649 535 aaPredicted RBP10.05□□□□□ -0.8
PRKCB-208ENST00000487674 NMIQ13287 307 aaPredicted RBP10.05□□□□□ -0.8
PRKCB-208ENST00000487674 ITGA7Q13683 1181 aa10.05□□□□□ -0.8
PRKCB-208ENST00000487674 GRIN2CQ14957 1233 aa10.05□□□□□ -0.8
PRKCB-208ENST00000487674 RRP12Q5JTH9 1297 aaKnown RBP10.05□□□□□ -0.8
PRKCB-208ENST00000487674 TTBK2Q6IQ55 1244 aa10.05□□□□□ -0.8
PRKCB-208ENST00000487674 C16orf59Q7L2K0 433 aa10.05□□□□□ -0.8
PRKCB-208ENST00000487674 ZNF589Q86UQ0 364 aaPredicted RBP10.05□□□□□ -0.8
PRKCB-208ENST00000487674 MTIF3Q9H2K0 278 aaKnown RBP10.05□□□□□ -0.8
PRKCB-208ENST00000487674 HIPK3Q9H422 1215 aa10.05□□□□□ -0.8
PRKCB-208ENST00000487674 ZNF576Q9H609 170 aa10.05□□□□□ -0.8
PRKCB-208ENST00000487674 IL23AQ9NPF7 189 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms