RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 IFIT3O14879 490 aaKnown RBP8.7□□□□□ -1.02
CPNE1-226ENST00000486021 FOXP2O15409 715 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 DYNC1LI2O43237 492 aaPredicted RBP8.7□□□□□ -1.02
CPNE1-226ENST00000486021 TIMP1P01033 207 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 CALM1P0DP23 149 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 CALM2P0DP24 149 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 CALM3P0DP25 149 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 TAL1P17542 331 aaPredicted RBP8.7□□□□□ -1.02
CPNE1-226ENST00000486021 GNAQP50148 359 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 SMAD3P84022 425 aaKnown RBP8.7□□□□□ -1.02
CPNE1-226ENST00000486021 CNTN2Q02246 1040 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 PTPN11Q06124 597 aaPredicted RBP8.7□□□□□ -1.02
CPNE1-226ENST00000486021 WTAPQ15007 396 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 DUSP28Q4G0W2 176 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 MUM1L1Q5H9M0 696 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 PSRC1Q6PGN9 363 aaPredicted RBP8.7□□□□□ -1.02
CPNE1-226ENST00000486021 SYNE3Q6ZMZ3 975 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 CATIPQ7Z7H3 387 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 DEFB123Q8N688 67 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 BADQ92934 168 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 CHMP4CQ96CF2 233 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 ZKSCAN3Q9BRR0 538 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 WDR11Q9BZH6 1224 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 INCENPQ9NQS7 918 aa8.7□□□□□ -1.02
CPNE1-226ENST00000486021 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.69□□□□□ -1.02
CPNE1-226ENST00000486021 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.69□□□□□ -1.02
CPNE1-226ENST00000486021 SOWAHBA6NEL2 793 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 PARNO95453 639 aaKnown RBP8.69□□□□□ -1.02
CPNE1-226ENST00000486021 PFKMP08237 780 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 RPS6P62753 249 aaKnown RBP8.69□□□□□ -1.02
CPNE1-226ENST00000486021 ITGA7Q13683 1181 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 CDC37Q16543 378 aaPredicted RBP8.69□□□□□ -1.02
CPNE1-226ENST00000486021 USH1GQ495M9 461 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 ARHGEF16Q5VV41 709 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 TTBK2Q6IQ55 1244 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 MFSD5Q6N075 450 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 TBC1D10CQ8IV04 446 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 ADGRF4Q8IZF3 695 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 OR6J1Q8NGC5 347 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 CTCFLQ8NI51 663 aaPredicted RBP8.69□□□□□ -1.02
CPNE1-226ENST00000486021 CUL5Q93034 780 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 TMEM87BQ96K49 555 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 RNPC3Q96LT9 517 aaKnown RBP8.69□□□□□ -1.02
CPNE1-226ENST00000486021 MAP3K14Q99558 947 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 LZTS2Q9BRK4 669 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 KATNAL1Q9BW62 490 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 SEC63Q9UGP8 760 aaKnown RBP8.69□□□□□ -1.02
CPNE1-226ENST00000486021 GNEQ9Y223 722 aaKnown RBP8.69□□□□□ -1.02
CPNE1-226ENST00000486021 NOD1Q9Y239 953 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 NEDD4P46934 1319 aa8.69□□□□□ -1.02
CPNE1-226ENST00000486021 RBM47A0AV96 593 aaKnown RBP8.68□□□□□ -1.02
CPNE1-226ENST00000486021 CCDC69A6NI79 296 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 KLRF2D3W0D1 207 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 ZBTB5O15062 677 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 STAM2O75886 525 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 TXNP10599 105 aaKnown RBP8.68□□□□□ -1.02
CPNE1-226ENST00000486021 ACTN1P12814 892 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 CASTP20810 708 aaKnown RBP8.68□□□□□ -1.02
CPNE1-226ENST00000486021 CHMLP26374 656 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 SMARCA1P28370 1054 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 MCM5P33992 734 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 CDK7P50613 346 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 FAAP100Q0VG06 881 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 GNPTABQ3T906 1256 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 CCSAPQ6IQ19 270 aaPredicted RBP8.68□□□□□ -1.02
CPNE1-226ENST00000486021 CENPQQ7L2Z9 268 aaPredicted RBP8.68□□□□□ -1.02
CPNE1-226ENST00000486021 EEPD1Q7L9B9 569 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 ENAHQ8N8S7 591 aaPredicted RBP8.68□□□□□ -1.02
CPNE1-226ENST00000486021 RETREG2Q8NC44 543 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 MTG1Q9BT17 334 aaPredicted RBP8.68□□□□□ -1.02
CPNE1-226ENST00000486021 UBA5Q9GZZ9 404 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 EHMT1Q9H9B1 1298 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 VAT1LQ9HCJ6 419 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 STXBP5LQ9Y2K9 1186 aa8.68□□□□□ -1.02
CPNE1-226ENST00000486021 NFIBO00712 420 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 EIF3JO75822 258 aaKnown RBP8.67□□□□□ -1.02
CPNE1-226ENST00000486021 CFBP00751 764 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 GH1P01241 217 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 MYL3P08590 195 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 GOLGA8HP0CJ92 632 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 TGFB3P10600 412 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 SMPD1P17405 629 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 RFC2P35250 354 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 SNAP25P60880 206 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 BFSP2Q13515 415 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 TAPT1Q6NXT6 567 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 NFRKBQ6P4R8 1299 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 NFXL1Q6ZNB6 911 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 FBXO16Q8IX29 292 aaPredicted RBP8.67□□□□□ -1.02
CPNE1-226ENST00000486021 SLC17A8Q8NDX2 589 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 MAP4K1Q92918 833 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 LRCH3Q96II8 777 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 RMDN3Q96TC7 470 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 KATNBL1Q9H079 304 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 HIPK3Q9H422 1215 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 MSRAQ9UJ68 235 aa8.67□□□□□ -1.02
CPNE1-226ENST00000486021 TRIP12Q14669 1992 aaPredicted RBP8.66□□□□□ -1.02
CPNE1-226ENST00000486021 PNMA6FA0A0J9YX94 578 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 TRIM43BA6NCK2 446 aa8.66□□□□□ -1.02
CPNE1-226ENST00000486021 E7EWF7 191 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms