RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 FLT1P17948 1338 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 XBP1P17861 261 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 SBK1Q52WX2 424 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 MICALL1Q8N3F8 863 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 ZSCAN10Q96SZ4 725 aaPredicted RBP16.62■□□□□ 0.25
TTC3-219ENST00000485402 SUGT1Q9Y2Z0 365 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 GAKO14976 1311 aa16.61■□□□□ 0.25
TTC3-219ENST00000485402 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
TTC3-219ENST00000485402 TRIM49BA6NDI0 452 aa16.61■□□□□ 0.25
TTC3-219ENST00000485402 ZNF185O15231 689 aa16.61■□□□□ 0.25
TTC3-219ENST00000485402 ATP1A1P05023 1023 aaKnown RBP16.61■□□□□ 0.25
TTC3-219ENST00000485402 COPB1P53618 953 aaKnown RBP16.61■□□□□ 0.25
TTC3-219ENST00000485402 PTGDRQ13258 359 aa16.61■□□□□ 0.25
TTC3-219ENST00000485402 CUL4BQ13620 913 aa16.61■□□□□ 0.25
TTC3-219ENST00000485402 IFIT1BQ5T764 474 aaKnown RBP16.61■□□□□ 0.25
TTC3-219ENST00000485402 NELFBQ8WX92 580 aa16.61■□□□□ 0.25
TTC3-219ENST00000485402 KCNJ18B7U540 433 aa16.61■□□□□ 0.25
TTC3-219ENST00000485402 TFAP4Q01664 338 aa16.61■□□□□ 0.25
TTC3-219ENST00000485402 TCP10Q12799 353 aa16.61■□□□□ 0.25
TTC3-219ENST00000485402 KCNJ12Q14500 433 aa16.61■□□□□ 0.25
TTC3-219ENST00000485402 ARHGAP25P42331 645 aa16.6■□□□□ 0.25
TTC3-219ENST00000485402 PACS2Q86VP3 889 aa16.6■□□□□ 0.25
TTC3-219ENST00000485402 ZNF444Q8N0Y2 327 aaPredicted RBP16.6■□□□□ 0.25
TTC3-219ENST00000485402 ENAHQ8N8S7 591 aaPredicted RBP16.6■□□□□ 0.25
TTC3-219ENST00000485402 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.6■□□□□ 0.25
TTC3-219ENST00000485402 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
TTC3-219ENST00000485402 E2F4Q16254 413 aa16.6■□□□□ 0.25
TTC3-219ENST00000485402 POLD4Q9HCU8 107 aa16.6■□□□□ 0.25
TTC3-219ENST00000485402 NDUFA10O95299 355 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 KRT2P35908 639 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 CYP27A1Q02318 531 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 STIM1Q13586 685 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 CDC42EP5Q6NZY7 148 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 SAR1BQ9Y6B6 198 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 TTC26A0AVF1 554 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 PLEKHA8P1O95397 391 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 ERCC3P19447 782 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 GGCXP38435 758 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 PAK1Q13153 545 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 APOBEC3HQ6NTF7 200 aaKnown RBP16.59■□□□□ 0.25
TTC3-219ENST00000485402 PIK3AP1Q6ZUJ8 805 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 DDX4Q9NQI0 724 aaKnown RBP16.59■□□□□ 0.25
TTC3-219ENST00000485402 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.59■□□□□ 0.255e-6■□□□□ 9.7
TTC3-219ENST00000485402 LUC7L2Q9Y383 392 aaKnown RBP16.59■□□□□ 0.25
TTC3-219ENST00000485402 IPO7O95373 1038 aaKnown RBP16.59■□□□□ 0.25
TTC3-219ENST00000485402 TSPY3P0CV98 308 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 TSPY8P0CW00 308 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 DNA2P51530 1060 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 NFIAQ12857 509 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 CDKAL1Q5VV42 579 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 TMTC2Q8N394 836 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 ZNF579Q8NAF0 562 aaKnown RBP16.59■□□□□ 0.25
TTC3-219ENST00000485402 GSDMAQ96QA5 445 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 EHD4Q9H223 541 aa16.59■□□□□ 0.25
TTC3-219ENST00000485402 SCN9AQ15858 1988 aa16.58■□□□□ 0.25
TTC3-219ENST00000485402 DUSP10Q9Y6W6 482 aa16.58■□□□□ 0.25
TTC3-219ENST00000485402 CCT5P48643 541 aa16.58■□□□□ 0.24
TTC3-219ENST00000485402 HHIPL2Q6UWX4 724 aa16.58■□□□□ 0.24
TTC3-219ENST00000485402 ZSCAN29Q8IWY8 852 aaPredicted RBP16.58■□□□□ 0.24
TTC3-219ENST00000485402 PSMD1Q99460 953 aa16.58■□□□□ 0.24
TTC3-219ENST00000485402 PSMD14O00487 310 aa16.58■□□□□ 0.24
TTC3-219ENST00000485402 ORC4O43929 436 aa16.58■□□□□ 0.24
TTC3-219ENST00000485402 PBX1P40424 430 aa16.58■□□□□ 0.24
TTC3-219ENST00000485402 TTC38Q5R3I4 469 aa16.58■□□□□ 0.24
TTC3-219ENST00000485402 NIM1KQ8IY84 436 aa16.58■□□□□ 0.24
TTC3-219ENST00000485402 IQUBQ8NA54 791 aa16.58■□□□□ 0.24
TTC3-219ENST00000485402 STX8Q9UNK0 236 aa16.58■□□□□ 0.24
TTC3-219ENST00000485402 MAST2Q6P0Q8 1798 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 SLURP2P0DP57 97 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 PCP11498 1178 aaKnown RBP16.57■□□□□ 0.24
TTC3-219ENST00000485402 MAGEA9P43362 315 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 LIG3P49916 1009 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 C2orf54Q08AI8 447 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 CDK8P49336 464 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 SEC23AQ15436 765 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 TCP11X2Q5H9J9 407 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 CATIPQ7Z7H3 387 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 JAKMIP2Q96AA8 810 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 BRMS1Q9HCU9 246 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 JRKLQ9Y4A0 524 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 FGRP09769 529 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 TRIM21P19474 475 aaKnown RBP16.57■□□□□ 0.24
TTC3-219ENST00000485402 NOP2P46087 812 aaKnown RBP16.57■□□□□ 0.24
TTC3-219ENST00000485402 NLRP5P59047 1200 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 OR8K1Q8NGG5 319 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 CCDC51Q96ER9 411 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 TAOK3Q9H2K8 898 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 TDRD3Q9H7E2 651 aaKnown RBP16.57■□□□□ 0.24
TTC3-219ENST00000485402 MED4Q9NPJ6 270 aa16.57■□□□□ 0.24
TTC3-219ENST00000485402 STK36Q9NRP7 1315 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 SYF2O95926 243 aaKnown RBP16.56■□□□□ 0.24
TTC3-219ENST00000485402 MYBL2P10244 700 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 IRX3P78415 501 aaPredicted RBP16.56■□□□□ 0.24
TTC3-219ENST00000485402 TUBB2AQ13885 445 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 MAP9Q49MG5 647 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 NLGN2Q8NFZ4 835 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 SPATA20Q8TB22 786 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 TUBB2BQ9BVA1 445 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 IDEP14735 1019 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 PRCPP42785 496 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms