RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 SUGT1Q9Y2Z0 365 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 TRBV23-1A0A0A0MS06 115 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 L1CAMP32004 1257 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 PDE6BP35913 854 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 CHRNEQ04844 493 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 DUSP4Q13115 394 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 CBX2Q14781 532 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-211ENST00000484581 NR0B2Q15466 257 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 CT47A1Q5JQC4 288 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-211ENST00000484581 KRTAP5-3Q6L8H2 238 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 RNF180Q86T96 592 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 TMEM192Q8IY95 271 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 CCDC74BQ96LY2 380 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 IPO9Q96P70 1041 aaKnown RBP6.18□□□□□ -1.42
VPS13A-211ENST00000484581 CDC6Q99741 560 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 APBA2Q99767 749 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 HAUS7Q99871 368 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 POLR3GLQ9BT43 218 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 FAM126AQ9BYI3 521 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-211ENST00000484581 ASCC2Q9H1I8 757 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-211ENST00000484581 SP110Q9HB58 689 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 INTS7Q9NVH2 962 aaKnown RBP6.18□□□□□ -1.42
VPS13A-211ENST00000484581 SUSD2Q9UGT4 822 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 GPR160Q9UJ42 338 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 MAPRE3Q9UPY8 281 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 FAN1Q9Y2M0 1017 aa6.18□□□□□ -1.42
VPS13A-211ENST00000484581 GSG1L2A8MUP6 293 aa6.17□□□□□ -1.42
VPS13A-211ENST00000484581 ALG1L2C9J202 215 aa6.17□□□□□ -1.42
VPS13A-211ENST00000484581 CLEC3AO75596 197 aa6.17□□□□□ -1.42
VPS13A-211ENST00000484581 UBOX5O94941 541 aa6.17□□□□□ -1.42
VPS13A-211ENST00000484581 EPHX1P07099 455 aa6.17□□□□□ -1.42
VPS13A-211ENST00000484581 INHBBP09529 407 aa6.17□□□□□ -1.42
VPS13A-211ENST00000484581 PPP2R2AP63151 447 aa6.17□□□□□ -1.42
VPS13A-211ENST00000484581 SNX17Q15036 470 aa6.17□□□□□ -1.42
VPS13A-211ENST00000484581 TDRD10Q5VZ19 366 aaKnown RBP6.17□□□□□ -1.42
VPS13A-211ENST00000484581 HEATR6Q6AI08 1181 aaKnown RBP6.17□□□□□ -1.42
VPS13A-211ENST00000484581 DDX42Q86XP3 938 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS13A-211ENST00000484581 INTS4Q96HW7 963 aaKnown RBP6.17□□□□□ -1.42
VPS13A-211ENST00000484581 KREMEN1Q96MU8 473 aa6.17□□□□□ -1.42
VPS13A-211ENST00000484581 KLHL25Q9H0H3 589 aa6.17□□□□□ -1.42
VPS13A-211ENST00000484581 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS13A-211ENST00000484581 YBX2Q9Y2T7 364 aaKnown RBP6.17□□□□□ -1.42
VPS13A-211ENST00000484581 CBFA2T2O43439 604 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 PEX10O60683 326 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 RAPGEF3O95398 923 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 FGFR1P11362 822 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 GBP1P32455 592 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 CTSWP56202 376 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 SUMO1P63165 101 aaKnown RBP6.16□□□□□ -1.42
VPS13A-211ENST00000484581 DLG4P78352 724 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 NFKB2Q00653 900 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 TIGD5Q53EQ6 642 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 FAM209AQ5JX71 171 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 ZNF227Q86WZ6 799 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 SCUBE1Q8IWY4 988 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 ANKS4BQ8N8V4 417 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 BAHD1Q8TBE0 780 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-211ENST00000484581 ASPNQ9BXN1 380 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 MCOLN1Q9GZU1 580 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 LRP2BPQ9P2M1 347 aa6.16□□□□□ -1.42
VPS13A-211ENST00000484581 MAGEC2Q9UBF1 373 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-211ENST00000484581 C9IYK1 514 aa6.15□□□□□ -1.42
VPS13A-211ENST00000484581 SEMA7AO75326 666 aa6.15□□□□□ -1.42
VPS13A-211ENST00000484581 EVA1CP58658 441 aa6.15□□□□□ -1.42
VPS13A-211ENST00000484581 BRDTQ58F21 947 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-211ENST00000484581 TRIM61Q5EBN2 209 aa6.15□□□□□ -1.42
VPS13A-211ENST00000484581 AXDND1Q5T1B0 1012 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-211ENST00000484581 YOD1Q5VVQ6 348 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-211ENST00000484581 AFAP1L2Q8N4X5 818 aa6.15□□□□□ -1.42
VPS13A-211ENST00000484581 ZNF513Q8N8E2 541 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-211ENST00000484581 GBP3Q9H0R5 595 aa6.15□□□□□ -1.42
VPS13A-211ENST00000484581 ZNF552Q9H707 407 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-211ENST00000484581 APEX2Q9UBZ4 518 aa6.15□□□□□ -1.42
VPS13A-211ENST00000484581 CNOT6Q9ULM6 557 aaKnown RBP6.15□□□□□ -1.42
VPS13A-211ENST00000484581 ARID4BQ4LE39 1312 aaPredicted RBP6.15□□□□□ -1.43
VPS13A-211ENST00000484581 TEX51A0A1B0GUA7 166 aa6.14□□□□□ -1.43
VPS13A-211ENST00000484581 SSU72P8A0A1W2PR75 194 aa6.14□□□□□ -1.43
VPS13A-211ENST00000484581 CAPNS1P04632 268 aa6.14□□□□□ -1.43
VPS13A-211ENST00000484581 TP53P04637 393 aaPredicted RBP6.14□□□□□ -1.43
VPS13A-211ENST00000484581 ITGAVP06756 1048 aa6.14□□□□□ -1.43
VPS13A-211ENST00000484581 TEKQ02763 1124 aa6.14□□□□□ -1.43
VPS13A-211ENST00000484581 WWC2Q6AWC2 1192 aa6.14□□□□□ -1.43
VPS13A-211ENST00000484581 LRRTM3Q86VH5 581 aa6.14□□□□□ -1.43
VPS13A-211ENST00000484581 FMNL3Q8IVF7 1028 aa6.14□□□□□ -1.43
VPS13A-211ENST00000484581 CLUHP3Q96NS8 147 aa6.14□□□□□ -1.43
VPS13A-211ENST00000484581 TARS2Q9BW92 718 aaKnown RBP6.14□□□□□ -1.43
VPS13A-211ENST00000484581 FAM86C1Q9NVL1 165 aa6.14□□□□□ -1.43
VPS13A-211ENST00000484581 SFMBT1Q9UHJ3 866 aa6.14□□□□□ -1.43
VPS13A-211ENST00000484581 THRAP3Q9Y2W1 955 aaKnown RBP6.14□□□□□ -1.43
VPS13A-211ENST00000484581 MYOCOSA0A1B0GUC4 107 aa6.13□□□□□ -1.43
VPS13A-211ENST00000484581 CPEP16870 476 aa6.13□□□□□ -1.43
VPS13A-211ENST00000484581 RPL10P27635 214 aaKnown RBP6.13□□□□□ -1.43
VPS13A-211ENST00000484581 SLC14A2Q15849 920 aa6.13□□□□□ -1.43
VPS13A-211ENST00000484581 ANKRD39Q53RE8 183 aa6.13□□□□□ -1.43
VPS13A-211ENST00000484581 ZNF385BQ569K4 471 aa6.13□□□□□ -1.43
VPS13A-211ENST00000484581 DCAF15Q66K64 600 aa6.13□□□□□ -1.43
VPS13A-211ENST00000484581 CCDC144CPQ8IYA2 1237 aa6.13□□□□□ -1.43
VPS13A-211ENST00000484581 PPM1KQ8N3J5 372 aa6.13□□□□□ -1.43
VPS13A-211ENST00000484581 CRACR2BQ8N4Y2 399 aaPredicted RBP6.13□□□□□ -1.43
VPS13A-211ENST00000484581 ENOX1Q8TC92 643 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms