RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 PPP1R18Q6NYC8 613 aa22.78■■□□□ 1.24
LIME1-205ENST00000480139 NOL8Q76FK4 1167 aaKnown RBP22.78■■□□□ 1.24
LIME1-205ENST00000480139 TEX2Q8IWB9 1127 aa22.78■■□□□ 1.24
LIME1-205ENST00000480139 TNS4Q8IZW8 715 aa22.78■■□□□ 1.24
LIME1-205ENST00000480139 SH3TC2Q8TF17 1288 aa22.78■■□□□ 1.24
LIME1-205ENST00000480139 FLRT1Q9NZU1 646 aa22.78■■□□□ 1.24
LIME1-205ENST00000480139 SCG2P13521 617 aa22.77■■□□□ 1.24
LIME1-205ENST00000480139 MCM2P49736 904 aa22.77■■□□□ 1.24
LIME1-205ENST00000480139 AKAP17AQ02040 695 aaKnown RBP22.77■■□□□ 1.24
LIME1-205ENST00000480139 WWC2Q6AWC2 1192 aa22.77■■□□□ 1.24
LIME1-205ENST00000480139 MAMDC4Q6UXC1 1216 aa22.77■■□□□ 1.24
LIME1-205ENST00000480139 SLC30A10Q6XR72 485 aa22.77■■□□□ 1.24
LIME1-205ENST00000480139 TRIM22Q8IYM9 498 aa22.77■■□□□ 1.24
LIME1-205ENST00000480139 PHKBQ93100 1093 aa22.77■■□□□ 1.24
LIME1-205ENST00000480139 ZNF333Q96JL9 665 aa22.77■■□□□ 1.24
LIME1-205ENST00000480139 FGD4Q96M96 766 aa22.77■■□□□ 1.24
LIME1-205ENST00000480139 SH2B1Q9NRF2 756 aaPredicted RBP22.77■■□□□ 1.24
LIME1-205ENST00000480139 INHAP05111 366 aa22.76■■□□□ 1.23
LIME1-205ENST00000480139 UBXN2AP68543 259 aa22.76■■□□□ 1.23
LIME1-205ENST00000480139 CNTN2Q02246 1040 aa22.76■■□□□ 1.23
LIME1-205ENST00000480139 SSRP1Q08945 709 aaKnown RBP22.76■■□□□ 1.23
LIME1-205ENST00000480139 PKN1Q16512 942 aa22.76■■□□□ 1.23
LIME1-205ENST00000480139 MAP3K21Q5TCX8 1036 aa22.76■■□□□ 1.23
LIME1-205ENST00000480139 MFSD14CQ5VZR4 134 aa22.76■■□□□ 1.23
LIME1-205ENST00000480139 HEATR3Q7Z4Q2 680 aa22.76■■□□□ 1.23
LIME1-205ENST00000480139 TINF2Q9BSI4 451 aa22.76■■□□□ 1.23
LIME1-205ENST00000480139 SLC26A6Q9BXS9 759 aa22.76■■□□□ 1.23
LIME1-205ENST00000480139 BARHL2Q9NY43 387 aa22.76■■□□□ 1.23
LIME1-205ENST00000480139 ADD3Q9UEY8 706 aaKnown RBP22.76■■□□□ 1.23
LIME1-205ENST00000480139 SYNGAP1Q96PV0 1343 aa22.76■■□□□ 1.23
LIME1-205ENST00000480139 STK36Q9NRP7 1315 aa22.76■■□□□ 1.23
LIME1-205ENST00000480139 SOWAHBA6NEL2 793 aa22.75■■□□□ 1.23
LIME1-205ENST00000480139 CFBP00751 764 aa22.75■■□□□ 1.23
LIME1-205ENST00000480139 CALML3P27482 149 aa22.75■■□□□ 1.23
LIME1-205ENST00000480139 DNERQ8NFT8 737 aa22.75■■□□□ 1.23
LIME1-205ENST00000480139 GPKOWQ92917 476 aaPredicted RBP eCLIP22.75■■□□□ 1.23
LIME1-205ENST00000480139 GCOM1H8Y6P7 765 aaPredicted RBP22.74■■□□□ 1.23
LIME1-205ENST00000480139 STXBP3O00186 592 aa22.74■■□□□ 1.23
LIME1-205ENST00000480139 PIK3CDO00329 1044 aa22.74■■□□□ 1.23
LIME1-205ENST00000480139 DEXIO95424 95 aa22.74■■□□□ 1.23
LIME1-205ENST00000480139 POLR2MP0CAP2 368 aa22.74■■□□□ 1.23
LIME1-205ENST00000480139 NECAB1Q8N987 351 aa22.74■■□□□ 1.23
LIME1-205ENST00000480139 SYTL5Q8TDW5 730 aaPredicted RBP22.74■■□□□ 1.23
LIME1-205ENST00000480139 TBC1D5Q92609 795 aa22.74■■□□□ 1.23
LIME1-205ENST00000480139 ABHD8Q96I13 439 aa22.74■■□□□ 1.23
LIME1-205ENST00000480139 BIN2Q9UBW5 565 aaPredicted RBP22.74■■□□□ 1.23
LIME1-205ENST00000480139 NRBP1Q9UHY1 535 aa22.74■■□□□ 1.23
LIME1-205ENST00000480139 ASTN1O14525 1302 aa22.74■■□□□ 1.23
LIME1-205ENST00000480139 LRRC37A2A6NM11 1700 aa22.74■■□□□ 1.23
LIME1-205ENST00000480139 ASB14A6NK59 587 aa22.73■■□□□ 1.23
LIME1-205ENST00000480139 CTDNEP1O95476 244 aa22.73■■□□□ 1.23
LIME1-205ENST00000480139 FAM177A1Q8N128 213 aaPredicted RBP22.73■■□□□ 1.23
LIME1-205ENST00000480139 MORC4Q8TE76 937 aa22.73■■□□□ 1.23
LIME1-205ENST00000480139 CCDC12Q8WUD4 166 aaPredicted RBP22.73■■□□□ 1.23
LIME1-205ENST00000480139 ESYT2A0FGR8 921 aa22.72■■□□□ 1.23
LIME1-205ENST00000480139 PRKAR2AP13861 404 aaKnown RBP22.72■■□□□ 1.23
LIME1-205ENST00000480139 CYP2C19P33261 490 aa22.72■■□□□ 1.23
LIME1-205ENST00000480139 ALDH5A1P51649 535 aaPredicted RBP22.72■■□□□ 1.23
LIME1-205ENST00000480139 NAPAP54920 295 aa22.72■■□□□ 1.23
LIME1-205ENST00000480139 CACNB2Q08289 660 aaPredicted RBP22.72■■□□□ 1.23
LIME1-205ENST00000480139 ST3GAL1Q11201 340 aa22.72■■□□□ 1.23
LIME1-205ENST00000480139 TYW1BQ6NUM6 668 aa22.72■■□□□ 1.23
LIME1-205ENST00000480139 GLT8D2Q9H1C3 349 aa22.72■■□□□ 1.23
LIME1-205ENST00000480139 PSTPIP2Q9H939 334 aa22.72■■□□□ 1.23
LIME1-205ENST00000480139 SH3GLB2Q9NR46 395 aa22.72■■□□□ 1.23
LIME1-205ENST00000480139 COL20A1Q9P218 1284 aa22.72■■□□□ 1.23
LIME1-205ENST00000480139 MCM3APO60318 1980 aa22.72■■□□□ 1.23
LIME1-205ENST00000480139 CD2BP2O95400 341 aaKnown RBP22.71■■□□□ 1.23
LIME1-205ENST00000480139 TRIM32Q13049 653 aa22.71■■□□□ 1.23
LIME1-205ENST00000480139 NSUN7Q8NE18 718 aaKnown RBP22.71■■□□□ 1.23
LIME1-205ENST00000480139 CUL5Q93034 780 aa22.71■■□□□ 1.23
LIME1-205ENST00000480139 MPHOSPH6Q99547 160 aaKnown RBP22.71■■□□□ 1.23
LIME1-205ENST00000480139 LLPHQ9BRT6 129 aaKnown RBP22.71■■□□□ 1.23
LIME1-205ENST00000480139 RIC8AQ9NPQ8 531 aa22.71■■□□□ 1.23
LIME1-205ENST00000480139 RPTORQ8N122 1335 aa22.71■■□□□ 1.23
LIME1-205ENST00000480139 B4DLN1 442 aa22.7■■□□□ 1.22
LIME1-205ENST00000480139 MEIS2O14770 477 aa22.7■■□□□ 1.22
LIME1-205ENST00000480139 CYBAP13498 195 aa22.7■■□□□ 1.22
LIME1-205ENST00000480139 EDNRBP24530 442 aa22.7■■□□□ 1.22
LIME1-205ENST00000480139 MRPL12P52815 198 aaKnown RBP22.7■■□□□ 1.22
LIME1-205ENST00000480139 ARMCX2Q7L311 632 aa22.7■■□□□ 1.22
LIME1-205ENST00000480139 CCDC148Q8NFR7 591 aa22.7■■□□□ 1.22
LIME1-205ENST00000480139 NSUN6Q8TEA1 469 aaKnown RBP22.7■■□□□ 1.22
LIME1-205ENST00000480139 PURBQ96QR8 312 aaKnown RBP22.7■■□□□ 1.22
LIME1-205ENST00000480139 FRMPD4Q14CM0 1322 aa22.69■■□□□ 1.22
LIME1-205ENST00000480139 PPFIA3O75145 1194 aa22.69■■□□□ 1.22
LIME1-205ENST00000480139 SNAI1O95863 264 aaPredicted RBP22.69■■□□□ 1.22
LIME1-205ENST00000480139 CCL5P13501 91 aa22.69■■□□□ 1.22
LIME1-205ENST00000480139 HOXA13P31271 388 aaPredicted RBP22.69■■□□□ 1.22
LIME1-205ENST00000480139 WASF1Q92558 559 aa22.69■■□□□ 1.22
LIME1-205ENST00000480139 TAAR1Q96RJ0 339 aa22.69■■□□□ 1.22
LIME1-205ENST00000480139 IWS1Q96ST2 819 aa22.69■■□□□ 1.22
LIME1-205ENST00000480139 RMDN3Q96TC7 470 aa22.69■■□□□ 1.22
LIME1-205ENST00000480139 ZMYND12Q9H0C1 365 aa22.69■■□□□ 1.22
LIME1-205ENST00000480139 ABHD16BQ9H3Z7 469 aa22.69■■□□□ 1.22
LIME1-205ENST00000480139 HMX1Q9NP08 348 aaPredicted RBP22.69■■□□□ 1.22
LIME1-205ENST00000480139 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.69■■□□□ 1.22
LIME1-205ENST00000480139 CNPY2Q9Y2B0 182 aa22.69■■□□□ 1.22
LIME1-205ENST00000480139 CENPFP49454 3210 aa22.69■■□□□ 1.22
LIME1-205ENST00000480139 SMCO2A6NFE2 343 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms