RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	SSTR3	P32745	418 aa	Predicted RBP	18.47	■□□□□ 0.55
HDLBP-238	ENST00000479894	PUS10	Q3MIT2	529 aa	Known RBP	18.47	■□□□□ 0.55
HDLBP-238	ENST00000479894	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	18.47	■□□□□ 0.55
HDLBP-238	ENST00000479894	ACAD9	Q9H845	621 aa		18.47	■□□□□ 0.55
HDLBP-238	ENST00000479894	POLR3E	Q9NVU0	708 aa		18.47	■□□□□ 0.55
HDLBP-238	ENST00000479894	ZNF536	O15090	1300 aa		18.47	■□□□□ 0.55
HDLBP-238	ENST00000479894	CYP2D7	A0A087X1C5	515 aa		18.46	■□□□□ 0.55
HDLBP-238	ENST00000479894	IQCF3	P0C7M6	154 aa		18.46	■□□□□ 0.55
HDLBP-238	ENST00000479894	TAPT1	Q6NXT6	567 aa		18.46	■□□□□ 0.55
HDLBP-238	ENST00000479894	KIFC2	Q96AC6	838 aa		18.46	■□□□□ 0.55
HDLBP-238	ENST00000479894	SYNPO2	Q9UMS6	1093 aa		18.46	■□□□□ 0.55
HDLBP-238	ENST00000479894	POTEB3	A0JP26	581 aa		18.45	■□□□□ 0.54
HDLBP-238	ENST00000479894	SOWAHB	A6NEL2	793 aa		18.45	■□□□□ 0.54
HDLBP-238	ENST00000479894	DCX	O43602	365 aa		18.45	■□□□□ 0.54
HDLBP-238	ENST00000479894	MBD4	O95243	580 aa		18.45	■□□□□ 0.54
HDLBP-238	ENST00000479894	LRRFIP1	Q32MZ4	808 aa	Known RBP	18.45	■□□□□ 0.54
HDLBP-238	ENST00000479894	POTEB	Q6S5H4	581 aa		18.45	■□□□□ 0.54
HDLBP-238	ENST00000479894	RETREG2	Q8NC44	543 aa		18.45	■□□□□ 0.54
HDLBP-238	ENST00000479894	GDPD5	Q8WTR4	605 aa		18.45	■□□□□ 0.54
HDLBP-238	ENST00000479894	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.45	■□□□□ 0.54
HDLBP-238	ENST00000479894	VTA1	Q9NP79	307 aa		18.45	■□□□□ 0.54
HDLBP-238	ENST00000479894	A1CF	Q9NQ94	594 aa	Known RBP	18.45	■□□□□ 0.54
HDLBP-238	ENST00000479894	GOLIM4	O00461	696 aa		18.44	■□□□□ 0.54
HDLBP-238	ENST00000479894	IL9	P15248	144 aa		18.44	■□□□□ 0.54
HDLBP-238	ENST00000479894	ADD2	P35612	726 aa		18.44	■□□□□ 0.54
HDLBP-238	ENST00000479894	KCNJ6	P48051	423 aa		18.44	■□□□□ 0.54
HDLBP-238	ENST00000479894	PURA	Q00577	322 aa	Known RBP	18.44	■□□□□ 0.54
HDLBP-238	ENST00000479894	TKFC	Q3LXA3	575 aa		18.44	■□□□□ 0.54
HDLBP-238	ENST00000479894	PTCRA	Q6ISU1	281 aa	Predicted RBP	18.44	■□□□□ 0.54
HDLBP-238	ENST00000479894	TICAM2	Q86XR7	235 aa		18.44	■□□□□ 0.54
HDLBP-238	ENST00000479894	PDGFC	Q9NRA1	345 aa		18.44	■□□□□ 0.54
HDLBP-238	ENST00000479894	GRXCR2	A6NFK2	248 aa		18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	KCNA5	P22460	613 aa		18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	ERVK-21	P61565	698 aa		18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	PTPN11	Q06124	597 aa	Predicted RBP	18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	DUSP28	Q4G0W2	176 aa		18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	CTR9	Q6PD62	1173 aa		18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	SPRED2	Q7Z698	418 aa		18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	MORC4	Q8TE76	937 aa		18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	MKL1	Q969V6	931 aa		18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	OSBPL3	Q9H4L5	887 aa		18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	SUGCT	Q9HAC7	445 aa		18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	HOMER2	Q9NSB8	354 aa		18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	ARPP21	Q9UBL0	812 aa	Predicted RBP	18.43	■□□□□ 0.54
HDLBP-238	ENST00000479894	PTGS1	P23219	599 aa		18.42	■□□□□ 0.54
HDLBP-238	ENST00000479894	CPT1A	P50416	773 aa		18.42	■□□□□ 0.54
HDLBP-238	ENST00000479894	PDE1A	P54750	535 aa		18.42	■□□□□ 0.54
HDLBP-238	ENST00000479894	BFSP2	Q13515	415 aa		18.42	■□□□□ 0.54
HDLBP-238	ENST00000479894	NFRKB	Q6P4R8	1299 aa		18.42	■□□□□ 0.54
HDLBP-238	ENST00000479894	FBXO16	Q8IX29	292 aa	Predicted RBP	18.42	■□□□□ 0.54
HDLBP-238	ENST00000479894	TGS1	Q96RS0	853 aa	Known RBP	18.42	■□□□□ 0.54
HDLBP-238	ENST00000479894	HAUS7	Q99871	368 aa		18.42	■□□□□ 0.54
HDLBP-238	ENST00000479894	MTG1	Q9BT17	334 aa	Predicted RBP	18.42	■□□□□ 0.54
HDLBP-238	ENST00000479894	RNF146	Q9NTX7	359 aa		18.42	■□□□□ 0.54
HDLBP-238	ENST00000479894	LCHN	A4D1U4	455 aa		18.41	■□□□□ 0.54
HDLBP-238	ENST00000479894	RASA1	P20936	1047 aa		18.41	■□□□□ 0.54
HDLBP-238	ENST00000479894	WDR5	P61964	334 aa	Known RBP	18.41	■□□□□ 0.54
HDLBP-238	ENST00000479894	ZSCAN25	Q6NSZ9	544 aa		18.41	■□□□□ 0.54
HDLBP-238	ENST00000479894	KIAA1211	Q6ZU35	1233 aa		18.41	■□□□□ 0.54
HDLBP-238	ENST00000479894	GMCL1P1	Q8NEA9	526 aa		18.41	■□□□□ 0.54
HDLBP-238	ENST00000479894	DNAJC2	Q99543	621 aa	Known RBP	18.41	■□□□□ 0.54
HDLBP-238	ENST00000479894	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	18.41	■□□□□ 0.54	3e-6	■□□□□ 11.2
HDLBP-238	ENST00000479894	GPHN	Q9NQX3	736 aa	Predicted RBP	18.41	■□□□□ 0.54
HDLBP-238	ENST00000479894	PRKAG3	Q9UGI9	489 aa		18.41	■□□□□ 0.54
HDLBP-238	ENST00000479894	TRIO	O75962	3097 aa		18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	LOC102724159	A0A0B4J2E5	919 aa		18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	IGKV6D-41	A0A0C4DH26	115 aa		18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	PWP2	Q15269	919 aa	Known RBP	18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	SBK1	Q52WX2	424 aa		18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	TMEM63B	Q5T3F8	832 aa		18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	NEK9	Q8TD19	979 aa		18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	MFSD14A	Q96MC6	490 aa		18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	ZBED2	Q9BTP6	218 aa		18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	CLIP2	Q9UDT6	1046 aa		18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	FAM50B	Q9Y247	325 aa		18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	SLC4A4	Q9Y6R1	1079 aa		18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	ZDBF2	Q9HCK1	2354 aa		18.4	■□□□□ 0.54
HDLBP-238	ENST00000479894	MICAL3	Q7RTP6	2002 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	KPNA6	O60684	536 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	PARN	O95453	639 aa	Known RBP	18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	BMP3	P12645	472 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	UBE3C	Q15386	1083 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	NBPF20	Q3BBV1	942 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	BRDT	Q58F21	947 aa	Predicted RBP	18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	EEPD1	Q7L9B9	569 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	PLEKHM2	Q8IWE5	1019 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	CCDC155	Q8N6L0	562 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	CAGE1	Q8TC20	777 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	TRERF1	Q96PN7	1200 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	RAD9A	Q99638	391 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	BOLA2	Q9H3K6	86 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	MKNK2	Q9HBH9	465 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	PAG1	Q9NWQ8	432 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	USP34	Q70CQ2	3546 aa		18.39	■□□□□ 0.53
HDLBP-238	ENST00000479894	TECTA	O75443	2155 aa		18.38	■□□□□ 0.53
HDLBP-238	ENST00000479894	ST18	O60284	1047 aa		18.38	■□□□□ 0.53
HDLBP-238	ENST00000479894	GJB5	O95377	273 aa		18.38	■□□□□ 0.53
HDLBP-238	ENST00000479894	MYL3	P08590	195 aa		18.38	■□□□□ 0.53
HDLBP-238	ENST00000479894	STAT2	P52630	851 aa		18.38	■□□□□ 0.53
HDLBP-238	ENST00000479894	FAM47C	Q5HY64	1035 aa		18.38	■□□□□ 0.53

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