RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 ZNF513Q8N8E2 541 aaPredicted RBP7.56□□□□□ -1.2
PRKD3-208ENST00000475912 TOX2Q96NM4 488 aa7.56□□□□□ -1.2
PRKD3-208ENST00000475912 ACTR10Q9NZ32 417 aa7.56□□□□□ -1.2
PRKD3-208ENST00000475912 SMG5Q9UPR3 1016 aaKnown RBP7.56□□□□□ -1.2
PRKD3-208ENST00000475912 TSPOAP1O95153 1857 aa7.55□□□□□ -1.2
PRKD3-208ENST00000475912 FHAD1B1AJZ9 1412 aa7.55□□□□□ -1.2
PRKD3-208ENST00000475912 FGRP09769 529 aa7.55□□□□□ -1.2
PRKD3-208ENST00000475912 VIPR1P32241 457 aa7.55□□□□□ -1.2
PRKD3-208ENST00000475912 ETFBP38117 255 aa7.55□□□□□ -1.2
PRKD3-208ENST00000475912 SRSF3P84103 164 aaKnown RBP7.55□□□□□ -1.2
PRKD3-208ENST00000475912 KCNA10Q16322 511 aa7.55□□□□□ -1.2
PRKD3-208ENST00000475912 LARP1BQ659C4 914 aaKnown RBP7.55□□□□□ -1.2
PRKD3-208ENST00000475912 RCSD1Q6JBY9 416 aa7.55□□□□□ -1.2
PRKD3-208ENST00000475912 LRRC56Q8IYG6 542 aaPredicted RBP7.55□□□□□ -1.2
PRKD3-208ENST00000475912 RCC1LQ96I51 464 aaKnown RBP7.55□□□□□ -1.2
PRKD3-208ENST00000475912 GCM1Q9NP62 436 aa7.55□□□□□ -1.2
PRKD3-208ENST00000475912 TNFRSF12AQ9NP84 129 aa7.55□□□□□ -1.2
PRKD3-208ENST00000475912 NUDT19A8MXV4 375 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 B2RBV5 119 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 TBC1D8O95759 1140 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 MPOP05164 745 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 AMPD2Q01433 879 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 ARID5AQ03989 594 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 GRB10Q13322 594 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 NCAPHQ15003 741 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 RAB3GAP1Q15042 981 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 TNNI3KQ59H18 835 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 C6orf15Q6UXA7 325 aaPredicted RBP7.54□□□□□ -1.2
PRKD3-208ENST00000475912 C1QL4Q86Z23 238 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 APBA2Q99767 749 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 KLHL14Q9P2G3 628 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 PRKAG3Q9UGI9 489 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 MBD1Q9UIS9 605 aaPredicted RBP7.54□□□□□ -1.2
PRKD3-208ENST00000475912 AKT3Q9Y243 479 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 BACE2Q9Y5Z0 518 aa7.54□□□□□ -1.2
PRKD3-208ENST00000475912 HRKO00198 91 aa7.53□□□□□ -1.2
PRKD3-208ENST00000475912 DNAJA1P31689 397 aaKnown RBP7.53□□□□□ -1.2
PRKD3-208ENST00000475912 LINC00310P59036 64 aa7.53□□□□□ -1.2
PRKD3-208ENST00000475912 YBX1P67809 324 aaKnown RBP7.53□□□□□ -1.2
PRKD3-208ENST00000475912 EEF1DP3Q658K8 133 aa7.53□□□□□ -1.2
PRKD3-208ENST00000475912 MCF2L2Q86YR7 1114 aa7.53□□□□□ -1.2
PRKD3-208ENST00000475912 PPP1R14AQ96A00 147 aa7.53□□□□□ -1.2
PRKD3-208ENST00000475912 LGR4Q9BXB1 951 aa7.53□□□□□ -1.2
PRKD3-208ENST00000475912 ZNF408Q9H9D4 720 aa7.53□□□□□ -1.2
PRKD3-208ENST00000475912 SIRT5Q9NXA8 310 aa7.53□□□□□ -1.2
PRKD3-208ENST00000475912 PPRC1Q5VV67 1664 aaKnown RBP7.52□□□□□ -1.21
PRKD3-208ENST00000475912 LMTK3Q96Q04 1460 aa7.52□□□□□ -1.21
PRKD3-208ENST00000475912 C2orf71A6NGG8 1288 aa7.52□□□□□ -1.21
PRKD3-208ENST00000475912 KCNH1O95259 989 aa7.52□□□□□ -1.21
PRKD3-208ENST00000475912 NAT2P11245 290 aa7.52□□□□□ -1.21
PRKD3-208ENST00000475912 SEPHS1P49903 392 aa7.52□□□□□ -1.21
PRKD3-208ENST00000475912 ZNF143P52747 638 aaPredicted RBP7.52□□□□□ -1.21
PRKD3-208ENST00000475912 FAM178BQ8IXR5 827 aa7.52□□□□□ -1.21
PRKD3-208ENST00000475912 BVESQ8NE79 360 aa7.52□□□□□ -1.21
PRKD3-208ENST00000475912 ZSCAN18Q8TBC5 510 aaPredicted RBP7.52□□□□□ -1.21
PRKD3-208ENST00000475912 IGSF5Q9NSI5 407 aa7.52□□□□□ -1.21
PRKD3-208ENST00000475912 EMC9Q9Y3B6 208 aa7.52□□□□□ -1.21
PRKD3-208ENST00000475912 ABLIM1O14639 778 aa7.51□□□□□ -1.21
PRKD3-208ENST00000475912 TACR1P25103 407 aa7.51□□□□□ -1.21
PRKD3-208ENST00000475912 L1CAMP32004 1257 aa7.51□□□□□ -1.21
PRKD3-208ENST00000475912 EPHB3P54753 998 aa7.51□□□□□ -1.21
PRKD3-208ENST00000475912 OLFML2BQ68BL8 750 aa7.51□□□□□ -1.21
PRKD3-208ENST00000475912 RPTNQ6XPR3 784 aa7.51□□□□□ -1.21
PRKD3-208ENST00000475912 TMC6Q7Z403 805 aa7.51□□□□□ -1.21
PRKD3-208ENST00000475912 MICAL1Q8TDZ2 1067 aa7.51□□□□□ -1.21
PRKD3-208ENST00000475912 CNTD2Q9H8S5 307 aa7.51□□□□□ -1.21
PRKD3-208ENST00000475912 RUSC2Q8N2Y8 1516 aa7.51□□□□□ -1.21
PRKD3-208ENST00000475912 A0A1W2PQJ5 194 aa7.5□□□□□ -1.21
PRKD3-208ENST00000475912 E9PSI1 815 aa7.5□□□□□ -1.21
PRKD3-208ENST00000475912 BICRALQ6AI39 1079 aa7.5□□□□□ -1.21
PRKD3-208ENST00000475912 CIAPIN1Q6FI81 312 aa7.5□□□□□ -1.21
PRKD3-208ENST00000475912 SPOCD1Q6ZMY3 1216 aa7.5□□□□□ -1.21
PRKD3-208ENST00000475912 CPNE8Q86YQ8 564 aa7.5□□□□□ -1.21
PRKD3-208ENST00000475912 CRACR2BQ8N4Y2 399 aaPredicted RBP7.5□□□□□ -1.21
PRKD3-208ENST00000475912 PDLIM7Q9NR12 457 aa7.5□□□□□ -1.21
PRKD3-208ENST00000475912 ERICH3Q5RHP9 1530 aa7.49□□□□□ -1.21
PRKD3-208ENST00000475912 NOP56O00567 594 aaKnown RBP7.49□□□□□ -1.21
PRKD3-208ENST00000475912 NUAK1O60285 661 aa7.49□□□□□ -1.21
PRKD3-208ENST00000475912 DDAH1O94760 285 aa7.49□□□□□ -1.21
PRKD3-208ENST00000475912 DBHP09172 617 aa7.49□□□□□ -1.21
PRKD3-208ENST00000475912 CDR1P51861 262 aa7.49□□□□□ -1.21
PRKD3-208ENST00000475912 CORO7P57737 925 aa7.49□□□□□ -1.21
PRKD3-208ENST00000475912 TMEM62Q0P6H9 643 aa7.49□□□□□ -1.21
PRKD3-208ENST00000475912 PLEKHN1Q494U1 663 aaPredicted RBP7.49□□□□□ -1.21
PRKD3-208ENST00000475912 GTF2IRD2BQ6EKJ0 949 aa7.49□□□□□ -1.21
PRKD3-208ENST00000475912 MRM1Q6IN84 353 aaKnown RBP7.49□□□□□ -1.21
PRKD3-208ENST00000475912 POMZP3Q6PJE2 187 aa7.49□□□□□ -1.21
PRKD3-208ENST00000475912 LCNL1Q6ZST4 164 aa7.49□□□□□ -1.21
PRKD3-208ENST00000475912 GTF2IRD2Q86UP8 949 aa7.49□□□□□ -1.21
PRKD3-208ENST00000475912 TRIM59Q8IWR1 403 aa7.49□□□□□ -1.21
PRKD3-208ENST00000475912 CNOT6Q9ULM6 557 aaKnown RBP7.49□□□□□ -1.21
PRKD3-208ENST00000475912 SUSD5O60279 629 aa7.48□□□□□ -1.21
PRKD3-208ENST00000475912 ZSCAN22P10073 491 aaPredicted RBP7.48□□□□□ -1.21
PRKD3-208ENST00000475912 PAMP19021 973 aa7.48□□□□□ -1.21
PRKD3-208ENST00000475912 SCRN1Q12765 414 aa7.48□□□□□ -1.21
PRKD3-208ENST00000475912 WRNQ14191 1432 aaPredicted RBP eCLIP7.48□□□□□ -1.21
PRKD3-208ENST00000475912 SSPNQ14714 243 aa7.48□□□□□ -1.21
PRKD3-208ENST00000475912 CBX2Q14781 532 aaPredicted RBP7.48□□□□□ -1.21
PRKD3-208ENST00000475912 FXNQ16595 210 aa7.48□□□□□ -1.21
PRKD3-208ENST00000475912 SV2CQ496J9 727 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 897.9 ms