RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 GJC2Q5T442 439 aaPredicted RBP21.97■■□□□ 1.11
PTCD3-210ENST00000473829 BLOC1S2Q6QNY1 142 aa21.97■■□□□ 1.11
PTCD3-210ENST00000473829 PCDHA1Q9Y5I3 950 aa21.97■■□□□ 1.11
PTCD3-210ENST00000473829 PNMA6FA0A0J9YX94 578 aa21.96■■□□□ 1.11
PTCD3-210ENST00000473829 PGK1P00558 417 aa21.96■■□□□ 1.11
PTCD3-210ENST00000473829 RARBP10826 455 aa21.96■■□□□ 1.11
PTCD3-210ENST00000473829 CASTP20810 708 aaKnown RBP21.96■■□□□ 1.11
PTCD3-210ENST00000473829 RPS6KB1P23443 525 aa21.96■■□□□ 1.11
PTCD3-210ENST00000473829 Q6ZUG5 572 aa21.96■■□□□ 1.11
PTCD3-210ENST00000473829 TMTC3Q6ZXV5 915 aa21.96■■□□□ 1.11
PTCD3-210ENST00000473829 EEPD1Q7L9B9 569 aa21.96■■□□□ 1.11
PTCD3-210ENST00000473829 FBXO16Q8IX29 292 aaPredicted RBP21.96■■□□□ 1.11
PTCD3-210ENST00000473829 FANCBQ8NB91 859 aa21.96■■□□□ 1.11
PTCD3-210ENST00000473829 SYTL5Q8TDW5 730 aaPredicted RBP21.96■■□□□ 1.11
PTCD3-210ENST00000473829 HTATIP2Q9BUP3 242 aa21.96■■□□□ 1.11
PTCD3-210ENST00000473829 XPNPEP3Q9NQH7 507 aa21.96■■□□□ 1.11
PTCD3-210ENST00000473829 ADD3Q9UEY8 706 aaKnown RBP21.96■■□□□ 1.11
PTCD3-210ENST00000473829 FAM184BQ9ULE4 1060 aa21.96■■□□□ 1.11
PTCD3-210ENST00000473829 KLF18A0A0U1RQI7 1052 aa21.95■■□□□ 1.1
PTCD3-210ENST00000473829 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.95■■□□□ 1.1
PTCD3-210ENST00000473829 DNM1LO00429 736 aa21.95■■□□□ 1.1
PTCD3-210ENST00000473829 SMARCA1P28370 1054 aa21.95■■□□□ 1.1
PTCD3-210ENST00000473829 LRRC41Q15345 812 aa21.95■■□□□ 1.1
PTCD3-210ENST00000473829 PDGFCQ9NRA1 345 aa21.95■■□□□ 1.1
PTCD3-210ENST00000473829 SYNRGQ9UMZ2 1314 aa21.95■■□□□ 1.1
PTCD3-210ENST00000473829 ZBTB43O43298 467 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 ADAMTS4O75173 837 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 MYCNP04198 464 aaPredicted RBP21.94■■□□□ 1.1
PTCD3-210ENST00000473829 PTGS1P23219 599 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 EDNRBP24530 442 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 ADCYAP1R1P41586 468 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 GNAQP50148 359 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 HSD17B4P51659 736 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 IRX5P78411 483 aaPredicted RBP21.94■■□□□ 1.1
PTCD3-210ENST00000473829 GHRHRQ02643 423 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 APOBRQ0VD83 1088 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 TAPT1Q6NXT6 567 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 MCF2L2Q86YR7 1114 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 DNERQ8NFT8 737 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 BRF1Q92994 677 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 TAAR1Q96RJ0 339 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 LZTS2Q9BRK4 669 aa21.94■■□□□ 1.1
PTCD3-210ENST00000473829 hCG_1642624A0A1W2PR95 340 aa21.93■■□□□ 1.1
PTCD3-210ENST00000473829 CFBP00751 764 aa21.93■■□□□ 1.1
PTCD3-210ENST00000473829 PSMA5P28066 241 aa21.93■■□□□ 1.1
PTCD3-210ENST00000473829 TMEM63BQ5T3F8 832 aa21.93■■□□□ 1.1
PTCD3-210ENST00000473829 SYNE3Q6ZMZ3 975 aa21.93■■□□□ 1.1
PTCD3-210ENST00000473829 CCDC82Q8N4S0 544 aa21.93■■□□□ 1.1
PTCD3-210ENST00000473829 ARRDC4Q8NCT1 418 aa21.93■■□□□ 1.1
PTCD3-210ENST00000473829 CNTNAP5Q8WYK1 1306 aa21.93■■□□□ 1.1
PTCD3-210ENST00000473829 DPF3Q92784 378 aa21.93■■□□□ 1.1
PTCD3-210ENST00000473829 RRP36Q96EU6 259 aaKnown RBP21.93■■□□□ 1.1
PTCD3-210ENST00000473829 AGXT2Q9BYV1 514 aa21.93■■□□□ 1.1
PTCD3-210ENST00000473829 MAF1Q9H063 256 aa21.93■■□□□ 1.1
PTCD3-210ENST00000473829 ZSWIM6Q9HCJ5 1215 aa21.93■■□□□ 1.1
PTCD3-210ENST00000473829 FAM217BQ9NTX9 383 aaPredicted RBP21.93■■□□□ 1.1
PTCD3-210ENST00000473829 LOC102724159A0A0B4J2E5 919 aa21.92■■□□□ 1.1
PTCD3-210ENST00000473829 MYADML2A6NDP7 307 aa21.92■■□□□ 1.1
PTCD3-210ENST00000473829 GOLGA8AA7E2F4 631 aa21.92■■□□□ 1.1
PTCD3-210ENST00000473829 GOLGA8BA8MQT2 603 aa21.92■■□□□ 1.1
PTCD3-210ENST00000473829 DUSP11O75319 330 aaKnown RBP21.92■■□□□ 1.1
PTCD3-210ENST00000473829 FGD1P98174 961 aa21.92■■□□□ 1.1
PTCD3-210ENST00000473829 FUT2Q10981 343 aa21.92■■□□□ 1.1
PTCD3-210ENST00000473829 PWP2Q15269 919 aaKnown RBP21.92■■□□□ 1.1
PTCD3-210ENST00000473829 RTN1Q16799 776 aa21.92■■□□□ 1.1
PTCD3-210ENST00000473829 PRPF38BQ5VTL8 546 aaKnown RBP21.92■■□□□ 1.1
PTCD3-210ENST00000473829 SENP6Q9GZR1 1112 aaPredicted RBP21.92■■□□□ 1.1
PTCD3-210ENST00000473829 VTA1Q9NP79 307 aa21.92■■□□□ 1.1
PTCD3-210ENST00000473829 KBTBD13C9JR72 458 aa21.91■■□□□ 1.1
PTCD3-210ENST00000473829 SEC24BO95487 1268 aa21.91■■□□□ 1.1
PTCD3-210ENST00000473829 CDC27P30260 824 aa21.91■■□□□ 1.1
PTCD3-210ENST00000473829 HOXA13P31271 388 aaPredicted RBP21.91■■□□□ 1.1
PTCD3-210ENST00000473829 RUFY3Q7L099 469 aa21.91■■□□□ 1.1
PTCD3-210ENST00000473829 FBXL16Q8N461 479 aa21.91■■□□□ 1.1
PTCD3-210ENST00000473829 UPF3BQ9BZI7 483 aaKnown RBP21.91■■□□□ 1.1
PTCD3-210ENST00000473829 NID2Q14112 1375 aa21.9■■□□□ 1.1
PTCD3-210ENST00000473829 SMPD1P17405 629 aa21.9■■□□□ 1.1
PTCD3-210ENST00000473829 TNFAIP2Q03169 654 aa21.9■■□□□ 1.1
PTCD3-210ENST00000473829 PDE4DQ08499 809 aa21.9■■□□□ 1.1
PTCD3-210ENST00000473829 LRRC26Q2I0M4 334 aa21.9■■□□□ 1.1
PTCD3-210ENST00000473829 RMDN3Q96TC7 470 aa21.9■■□□□ 1.1
PTCD3-210ENST00000473829 UPF3AQ9H1J1 476 aaKnown RBP21.9■■□□□ 1.1
PTCD3-210ENST00000473829 RBM28Q9NW13 759 aaKnown RBP21.9■■□□□ 1.1
PTCD3-210ENST00000473829 SEC63Q9UGP8 760 aaKnown RBP21.9■■□□□ 1.1
PTCD3-210ENST00000473829 NAP1L2Q9ULW6 460 aaPredicted RBP21.9■■□□□ 1.1
PTCD3-210ENST00000473829 GNEQ9Y223 722 aaKnown RBP21.9■■□□□ 1.1
PTCD3-210ENST00000473829 KIAA1217Q5T5P2 1943 aa21.9■■□□□ 1.1
PTCD3-210ENST00000473829 H0YGN5 161 aa21.89■■□□□ 1.09
PTCD3-210ENST00000473829 CTAGE5O15320 804 aa21.89■■□□□ 1.09
PTCD3-210ENST00000473829 EIF2AK2P19525 551 aaKnown RBP21.89■■□□□ 1.09
PTCD3-210ENST00000473829 RCAN1P53805 252 aa21.89■■□□□ 1.09
PTCD3-210ENST00000473829 TRAF1Q13077 416 aa21.89■■□□□ 1.09
PTCD3-210ENST00000473829 TOB2Q14106 344 aaPredicted RBP21.89■■□□□ 1.09
PTCD3-210ENST00000473829 CCSAPQ6IQ19 270 aaPredicted RBP21.89■■□□□ 1.09
PTCD3-210ENST00000473829 RNF180Q86T96 592 aa21.89■■□□□ 1.09
PTCD3-210ENST00000473829 KLHDC9Q8NEP7 349 aa21.89■■□□□ 1.09
PTCD3-210ENST00000473829 NSUN6Q8TEA1 469 aaKnown RBP21.89■■□□□ 1.09
PTCD3-210ENST00000473829 TM6SF1Q9BZW5 370 aa21.89■■□□□ 1.09
PTCD3-210ENST00000473829 PXMP2Q9NR77 195 aa21.89■■□□□ 1.09
PTCD3-210ENST00000473829 PHF24Q9UPV7 400 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms