RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 IQSEC1Q6DN90 963 aa24.44■■□□□ 1.5
SREBF1-210ENST00000471445 ANKRD33Q7Z3H0 272 aa24.44■■□□□ 1.5
SREBF1-210ENST00000471445 SKAP1Q86WV1 359 aa24.44■■□□□ 1.5
SREBF1-210ENST00000471445 MB21D2Q8IYB1 491 aaPredicted RBP24.44■■□□□ 1.5
SREBF1-210ENST00000471445 DNERQ8NFT8 737 aa24.44■■□□□ 1.5
SREBF1-210ENST00000471445 LRCH3Q96II8 777 aa24.44■■□□□ 1.5
SREBF1-210ENST00000471445 ESYT1Q9BSJ8 1104 aa24.44■■□□□ 1.5
SREBF1-210ENST00000471445 LSG1Q9H089 658 aaKnown RBP24.44■■□□□ 1.5
SREBF1-210ENST00000471445 MAD2L2Q9UI95 211 aa24.44■■□□□ 1.5
SREBF1-210ENST00000471445 Q9Y3F1 56 aa24.44■■□□□ 1.5
SREBF1-210ENST00000471445 LAMA3Q16787 3333 aa24.43■■□□□ 1.5
SREBF1-210ENST00000471445 KIAA1217Q5T5P2 1943 aa24.43■■□□□ 1.5
SREBF1-210ENST00000471445 TRIM43BA6NCK2 446 aa24.43■■□□□ 1.5
SREBF1-210ENST00000471445 IFIT3O14879 490 aaKnown RBP24.43■■□□□ 1.5
SREBF1-210ENST00000471445 DHX16O60231 1041 aaKnown RBP24.43■■□□□ 1.5
SREBF1-210ENST00000471445 PQBP1O60828 265 aaKnown RBP24.43■■□□□ 1.5
SREBF1-210ENST00000471445 PTGS1P23219 599 aa24.43■■□□□ 1.5
SREBF1-210ENST00000471445 ANTXR2P58335 489 aa24.43■■□□□ 1.5
SREBF1-210ENST00000471445 GNASQ5JWF2 1037 aa24.43■■□□□ 1.5
SREBF1-210ENST00000471445 NOL8Q76FK4 1167 aaKnown RBP24.43■■□□□ 1.5
SREBF1-210ENST00000471445 TRIM43Q96BQ3 446 aaPredicted RBP24.43■■□□□ 1.5
SREBF1-210ENST00000471445 MTMR8Q96EF0 704 aa24.43■■□□□ 1.5
SREBF1-210ENST00000471445 TOX2Q96NM4 488 aa24.43■■□□□ 1.5
SREBF1-210ENST00000471445 SENP2Q9HC62 589 aa24.43■■□□□ 1.5
SREBF1-210ENST00000471445 ERICH2A1L162 156 aa24.42■■□□□ 1.5
SREBF1-210ENST00000471445 PALM3A6NDB9 673 aaPredicted RBP24.42■■□□□ 1.5
SREBF1-210ENST00000471445 BEX3Q00994 111 aa24.42■■□□□ 1.5
SREBF1-210ENST00000471445 GRM4Q14833 912 aa24.42■■□□□ 1.5
SREBF1-210ENST00000471445 TMEM63BQ5T3F8 832 aa24.42■■□□□ 1.5
SREBF1-210ENST00000471445 MROH7Q68CQ1 1323 aa24.41■■□□□ 1.5
SREBF1-210ENST00000471445 RBM47A0AV96 593 aaKnown RBP24.41■■□□□ 1.5
SREBF1-210ENST00000471445 KLRF2D3W0D1 207 aa24.41■■□□□ 1.5
SREBF1-210ENST00000471445 KIAA0355O15063 1070 aa24.41■■□□□ 1.5
SREBF1-210ENST00000471445 WTAPQ15007 396 aa24.41■■□□□ 1.5
SREBF1-210ENST00000471445 SART3Q15020 963 aaKnown RBP24.41■■□□□ 1.5
SREBF1-210ENST00000471445 DUSP28Q4G0W2 176 aa24.41■■□□□ 1.5
SREBF1-210ENST00000471445 KIAA1211Q6ZU35 1233 aa24.41■■□□□ 1.5
SREBF1-210ENST00000471445 FBXO11Q86XK2 927 aa24.41■■□□□ 1.5
SREBF1-210ENST00000471445 MPHOSPH6Q99547 160 aaKnown RBP24.41■■□□□ 1.5
SREBF1-210ENST00000471445 BAZ2BQ9UIF8 2168 aaKnown RBP24.41■■□□□ 1.5
SREBF1-210ENST00000471445 A0A0U1RQG5 324 aaPredicted RBP24.4■■□□□ 1.5
SREBF1-210ENST00000471445 CDK7P50613 346 aa24.4■■□□□ 1.5
SREBF1-210ENST00000471445 FAAP100Q0VG06 881 aa24.4■■□□□ 1.5
SREBF1-210ENST00000471445 FSCN1Q16658 493 aaKnown RBP24.4■■□□□ 1.5
SREBF1-210ENST00000471445 CHST3Q7LGC8 479 aa24.4■■□□□ 1.5
SREBF1-210ENST00000471445 BADQ92934 168 aa24.4■■□□□ 1.5
SREBF1-210ENST00000471445 AP5M1Q9H0R1 490 aa24.4■■□□□ 1.5
SREBF1-210ENST00000471445 VAT1LQ9HCJ6 419 aa24.4■■□□□ 1.5
SREBF1-210ENST00000471445 MRPL11Q9Y3B7 192 aaKnown RBP24.4■■□□□ 1.5
SREBF1-210ENST00000471445 SZT2Q5T011 3432 aa24.4■■□□□ 1.5
SREBF1-210ENST00000471445 DYNC1LI2O43237 492 aaPredicted RBP24.39■■□□□ 1.49
SREBF1-210ENST00000471445 ITGB8P26012 769 aa24.39■■□□□ 1.49
SREBF1-210ENST00000471445 PDE4DQ08499 809 aa24.39■■□□□ 1.49
SREBF1-210ENST00000471445 TROAPQ12815 778 aa24.39■■□□□ 1.49
SREBF1-210ENST00000471445 SLC35G1Q2M3R5 365 aa24.39■■□□□ 1.49
SREBF1-210ENST00000471445 MCF2L2Q86YR7 1114 aa24.39■■□□□ 1.49
SREBF1-210ENST00000471445 SYTL5Q8TDW5 730 aaPredicted RBP24.39■■□□□ 1.49
SREBF1-210ENST00000471445 TBC1D5Q92609 795 aa24.39■■□□□ 1.49
SREBF1-210ENST00000471445 AMNQ9BXJ7 453 aa24.39■■□□□ 1.49
SREBF1-210ENST00000471445 COL20A1Q9P218 1284 aa24.39■■□□□ 1.49
SREBF1-210ENST00000471445 DCDC2CA8MYV0 355 aa24.38■■□□□ 1.49
SREBF1-210ENST00000471445 ARVCFO00192 962 aa24.38■■□□□ 1.49
SREBF1-210ENST00000471445 GHRHRQ02643 423 aa24.38■■□□□ 1.49
SREBF1-210ENST00000471445 TMEM67Q5HYA8 995 aa24.38■■□□□ 1.49
SREBF1-210ENST00000471445 CXCL17Q6UXB2 119 aa24.38■■□□□ 1.49
SREBF1-210ENST00000471445 IGDCC4Q8TDY8 1250 aa24.38■■□□□ 1.49
SREBF1-210ENST00000471445 MTA3Q9BTC8 594 aa24.38■■□□□ 1.49
SREBF1-210ENST00000471445 WDR11Q9BZH6 1224 aa24.38■■□□□ 1.49
SREBF1-210ENST00000471445 TBX21Q9UL17 535 aa24.38■■□□□ 1.49
SREBF1-210ENST00000471445 SCN10AQ9Y5Y9 1956 aa24.38■■□□□ 1.49
SREBF1-210ENST00000471445 B4DLN1 442 aa24.37■■□□□ 1.49
SREBF1-210ENST00000471445 OPLAHO14841 1288 aa24.37■■□□□ 1.49
SREBF1-210ENST00000471445 SLC27A2O14975 620 aa24.37■■□□□ 1.49
SREBF1-210ENST00000471445 ZBTB5O15062 677 aa24.37■■□□□ 1.49
SREBF1-210ENST00000471445 PPP1R11O60927 126 aaPredicted RBP24.37■■□□□ 1.49
SREBF1-210ENST00000471445 CABYRO75952 493 aa24.37■■□□□ 1.49
SREBF1-210ENST00000471445 MRPL12P52815 198 aaKnown RBP24.37■■□□□ 1.49
SREBF1-210ENST00000471445 GPR153Q6NV75 609 aa24.37■■□□□ 1.49
SREBF1-210ENST00000471445 FAM126BQ8IXS8 530 aa24.37■■□□□ 1.49
SREBF1-210ENST00000471445 RIOX1Q9H6W3 641 aa24.37■■□□□ 1.49
SREBF1-210ENST00000471445 TMEM39AQ9NV64 488 aa24.37■■□□□ 1.49
SREBF1-210ENST00000471445 ZEB2O60315 1214 aa24.36■■□□□ 1.49
SREBF1-210ENST00000471445 NECTIN1Q15223 517 aa24.36■■□□□ 1.49
SREBF1-210ENST00000471445 SLC43A3Q8NBI5 491 aa24.36■■□□□ 1.49
SREBF1-210ENST00000471445 SCFD2Q8WU76 684 aa24.36■■□□□ 1.49
SREBF1-210ENST00000471445 TAAR1Q96RJ0 339 aa24.36■■□□□ 1.49
SREBF1-210ENST00000471445 LY9Q9HBG7 655 aa24.36■■□□□ 1.49
SREBF1-210ENST00000471445 ANO2Q9NQ90 1003 aa24.36■■□□□ 1.49
SREBF1-210ENST00000471445 NKRFO15226 690 aaKnown RBP eCLIP24.35■■□□□ 1.49
SREBF1-210ENST00000471445 CYTH3O43739 400 aa24.35■■□□□ 1.49
SREBF1-210ENST00000471445 RAG1P15918 1043 aa24.35■■□□□ 1.49
SREBF1-210ENST00000471445 PPP2R5BQ15173 497 aa24.35■■□□□ 1.49
SREBF1-210ENST00000471445 CREB3L3Q68CJ9 461 aa24.35■■□□□ 1.49
SREBF1-210ENST00000471445 CATIPQ7Z7H3 387 aa24.35■■□□□ 1.49
SREBF1-210ENST00000471445 VTI1AQ96AJ9 217 aa24.35■■□□□ 1.49
SREBF1-210ENST00000471445 DDAH1O94760 285 aa24.34■■□□□ 1.49
SREBF1-210ENST00000471445 HSD17B4P51659 736 aa24.34■■□□□ 1.49
SREBF1-210ENST00000471445 COL9A3Q14050 684 aaPredicted RBP24.34■■□□□ 1.49
SREBF1-210ENST00000471445 HOMER1Q86YM7 354 aa24.34■■□□□ 1.49
SREBF1-210ENST00000471445 OR6J1Q8NGC5 347 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms