RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 IQSEC1Q6DN90 963 aa19.09■□□□□ 0.65
COL9A3-208ENST00000469802 RNF207Q6ZRF8 634 aa19.09■□□□□ 0.65
COL9A3-208ENST00000469802 EEPD1Q7L9B9 569 aa19.09■□□□□ 0.65
COL9A3-208ENST00000469802 RBM47A0AV96 593 aaKnown RBP19.08■□□□□ 0.64
COL9A3-208ENST00000469802 ARVCFO00192 962 aa19.08■□□□□ 0.64
COL9A3-208ENST00000469802 RAG1P15918 1043 aa19.08■□□□□ 0.64
COL9A3-208ENST00000469802 EPHB4P54760 987 aa19.08■□□□□ 0.64
COL9A3-208ENST00000469802 CDC37Q16543 378 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-208ENST00000469802 DUSP28Q4G0W2 176 aa19.08■□□□□ 0.64
COL9A3-208ENST00000469802 FAM109BQ6ICB4 259 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-208ENST00000469802 FAM126BQ8IXS8 530 aa19.08■□□□□ 0.64
COL9A3-208ENST00000469802 SLC43A3Q8NBI5 491 aa19.08■□□□□ 0.64
COL9A3-208ENST00000469802 RGS22Q8NE09 1264 aa19.08■□□□□ 0.64
COL9A3-208ENST00000469802 UBA5Q9GZZ9 404 aa19.08■□□□□ 0.64
COL9A3-208ENST00000469802 MAF1Q9H063 256 aa19.08■□□□□ 0.64
COL9A3-208ENST00000469802 TMEM39AQ9NV64 488 aa19.08■□□□□ 0.64
COL9A3-208ENST00000469802 MTMR10Q9NXD2 777 aa19.08■□□□□ 0.64
COL9A3-208ENST00000469802 CABYRO75952 493 aa19.07■□□□□ 0.64
COL9A3-208ENST00000469802 CALML3P27482 149 aa19.07■□□□□ 0.64
COL9A3-208ENST00000469802 PTH1RQ03431 593 aa19.07■□□□□ 0.64
COL9A3-208ENST00000469802 CXCL17Q6UXB2 119 aa19.07■□□□□ 0.64
COL9A3-208ENST00000469802 NOL8Q76FK4 1167 aaKnown RBP19.07■□□□□ 0.64
COL9A3-208ENST00000469802 ADGRF4Q8IZF3 695 aa19.07■□□□□ 0.64
COL9A3-208ENST00000469802 DNERQ8NFT8 737 aa19.07■□□□□ 0.64
COL9A3-208ENST00000469802 RUFY2Q8WXA3 655 aa19.07■□□□□ 0.64
COL9A3-208ENST00000469802 UBAC1Q9BSL1 405 aa19.07■□□□□ 0.64
COL9A3-208ENST00000469802 SGSM2O43147 1006 aa19.06■□□□□ 0.64
COL9A3-208ENST00000469802 CYP21A2P08686 494 aa19.06■□□□□ 0.64
COL9A3-208ENST00000469802 PARP1P09874 1014 aaKnown RBP19.06■□□□□ 0.64
COL9A3-208ENST00000469802 FPGSQ05932 587 aa19.06■□□□□ 0.64
COL9A3-208ENST00000469802 USH1GQ495M9 461 aa19.06■□□□□ 0.64
COL9A3-208ENST00000469802 KIAA1211Q6ZU35 1233 aa19.06■□□□□ 0.64
COL9A3-208ENST00000469802 CYB5R4Q7L1T6 521 aa19.06■□□□□ 0.64
COL9A3-208ENST00000469802 AP5M1Q9H0R1 490 aa19.06■□□□□ 0.64
COL9A3-208ENST00000469802 GRIN2DO15399 1336 aa19.05■□□□□ 0.64
COL9A3-208ENST00000469802 ABCB11O95342 1321 aa19.05■□□□□ 0.64
COL9A3-208ENST00000469802 DYNC1LI2O43237 492 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-208ENST00000469802 TIMP1P01033 207 aa19.05■□□□□ 0.64
COL9A3-208ENST00000469802 CD4P01730 458 aa19.05■□□□□ 0.64
COL9A3-208ENST00000469802 IFIT1BQ5T764 474 aaKnown RBP19.05■□□□□ 0.64
COL9A3-208ENST00000469802 JMJD4Q9H9V9 463 aa19.05■□□□□ 0.64
COL9A3-208ENST00000469802 TANC1Q9C0D5 1861 aa19.05■□□□□ 0.64
COL9A3-208ENST00000469802 QRICH1Q2TAL8 776 aa19.04■□□□□ 0.64
COL9A3-208ENST00000469802 GBF1Q92538 1859 aa19.04■□□□□ 0.64
COL9A3-208ENST00000469802 VTI1AQ96AJ9 217 aa19.04■□□□□ 0.64
COL9A3-208ENST00000469802 WDR11Q9BZH6 1224 aa19.04■□□□□ 0.64
COL9A3-208ENST00000469802 BAZ2BQ9UIF8 2168 aaKnown RBP19.04■□□□□ 0.64
COL9A3-208ENST00000469802 STXBP5LQ9Y2K9 1186 aa19.04■□□□□ 0.64
COL9A3-208ENST00000469802 TAF6LQ9Y6J9 622 aa19.04■□□□□ 0.64
COL9A3-208ENST00000469802 U3KPZ7 1027 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-208ENST00000469802 ZEB2O60315 1214 aa19.03■□□□□ 0.64
COL9A3-208ENST00000469802 SMAD3P84022 425 aaKnown RBP19.03■□□□□ 0.64
COL9A3-208ENST00000469802 PDE4DQ08499 809 aa19.03■□□□□ 0.64
COL9A3-208ENST00000469802 MFSD5Q6N075 450 aa19.03■□□□□ 0.64
COL9A3-208ENST00000469802 STAG2Q8N3U4 1231 aa19.03■□□□□ 0.64
COL9A3-208ENST00000469802 MTMR8Q96EF0 704 aa19.03■□□□□ 0.64
COL9A3-208ENST00000469802 MPHOSPH6Q99547 160 aaKnown RBP19.03■□□□□ 0.64
COL9A3-208ENST00000469802 SEZ6LQ9BYH1 1024 aa19.03■□□□□ 0.64
COL9A3-208ENST00000469802 COL20A1Q9P218 1284 aa19.03■□□□□ 0.64
COL9A3-208ENST00000469802 TLR3O15455 904 aaKnown RBP19.02■□□□□ 0.64
COL9A3-208ENST00000469802 GHRHRQ02643 423 aa19.02■□□□□ 0.64
COL9A3-208ENST00000469802 ITGA7Q13683 1181 aa19.02■□□□□ 0.64
COL9A3-208ENST00000469802 STOX1Q6ZVD7 989 aa19.02■□□□□ 0.64
COL9A3-208ENST00000469802 SYTL5Q8TDW5 730 aaPredicted RBP19.02■□□□□ 0.64
COL9A3-208ENST00000469802 SCFD2Q8WU76 684 aa19.02■□□□□ 0.64
COL9A3-208ENST00000469802 TBC1D5Q92609 795 aa19.02■□□□□ 0.64
COL9A3-208ENST00000469802 RNPC3Q96LT9 517 aaKnown RBP19.02■□□□□ 0.64
COL9A3-208ENST00000469802 GUCD1Q96NT3 240 aa19.02■□□□□ 0.64
COL9A3-208ENST00000469802 MAD2L2Q9UI95 211 aa19.02■□□□□ 0.64
COL9A3-208ENST00000469802 CDH23Q9H251 3354 aa19.02■□□□□ 0.63
COL9A3-208ENST00000469802 MYH7BA7E2Y1 1941 aa19.02■□□□□ 0.63
COL9A3-208ENST00000469802 PALM3A6NDB9 673 aaPredicted RBP19.01■□□□□ 0.63
COL9A3-208ENST00000469802 OPLAHO14841 1288 aa19.01■□□□□ 0.63
COL9A3-208ENST00000469802 NKRFO15226 690 aaKnown RBP eCLIP19.01■□□□□ 0.63
COL9A3-208ENST00000469802 PURAQ00577 322 aaKnown RBP19.01■□□□□ 0.63
COL9A3-208ENST00000469802 TRDNQ13061 729 aa19.01■□□□□ 0.63
COL9A3-208ENST00000469802 PPP2R5BQ15173 497 aa19.01■□□□□ 0.63
COL9A3-208ENST00000469802 SLC35G1Q2M3R5 365 aa19.01■□□□□ 0.63
COL9A3-208ENST00000469802 FBXO11Q86XK2 927 aa19.01■□□□□ 0.63
COL9A3-208ENST00000469802 MAP4K1Q92918 833 aa19.01■□□□□ 0.63
COL9A3-208ENST00000469802 B4DLN1 442 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 KLRF2D3W0D1 207 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 E7EWF7 191 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 PPP1R11O60927 126 aaPredicted RBP19■□□□□ 0.63
COL9A3-208ENST00000469802 CPT1AP50416 773 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 MRPL12P52815 198 aaKnown RBP19■□□□□ 0.63
COL9A3-208ENST00000469802 PSMC6P62333 389 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 PPIGQ13427 754 aaKnown RBP eCLIP19■□□□□ 0.634e-32■■■□□ 14.9
COL9A3-208ENST00000469802 GRM4Q14833 912 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 ZNF697Q5TEC3 545 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 C16orf59Q7L2K0 433 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 MCF2L2Q86YR7 1114 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 PPP1R12CQ9BZL4 782 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 SENP2Q9HC62 589 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 POLR3EQ9NVU0 708 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 MRPL11Q9Y3B7 192 aaKnown RBP19■□□□□ 0.63
COL9A3-208ENST00000469802 SCN5AQ14524 2016 aa19■□□□□ 0.63
COL9A3-208ENST00000469802 DHX16O60231 1041 aaKnown RBP18.99■□□□□ 0.63
COL9A3-208ENST00000469802 B4GALT4O60513 344 aa18.99■□□□□ 0.63
COL9A3-208ENST00000469802 ARIH2O95376 493 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms