RNA–Protein interactions for RNA: ENST00000466913.1

MUC1-215, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 177 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-215	ENST00000466913	IMPDH2	P12268	514 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	RAP1GAP	P47736	663 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	MESP2	Q0VG99	397 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	RNF111	Q6ZNA4	994 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	PRR23B	Q6ZRT6	265 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	USP48	Q86UV5	1035 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	SLITRK4	Q8IW52	837 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	HOMEZ	Q8IX15	550 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	KRTAP9-9	Q9BYP9	154 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	KRTAP9-4	Q9BYQ2	154 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	MKRN2	Q9H000	416 aa	Known RBP	4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	SLC6A17	Q9H1V8	727 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	CNNM2	Q9H8M5	875 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	STK26	Q9P289	416 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	RGS17	Q9UGC6	210 aa	Predicted RBP	4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	ABCA3	Q99758	1704 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	USP32	Q8NFA0	1604 aa		4.06	□□□□□ -1.76
MUC1-215	ENST00000466913	PXDN	Q92626	1479 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	PNPLA6	Q8IY17	1366 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	RGPD8	O14715	1765 aa	Predicted RBP	4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	MEIS3P2	A8K0S8	358 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	TNFRSF10C	O14798	259 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	NME1	P15531	152 aa	Known RBP	4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	ENDOU	P21128	410 aa	Known RBP	4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	POLR2B	P30876	1174 aa	Known RBP	4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	PCBP3	P57721	371 aa	Known RBP	4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	ERVFC1	P60507	584 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	TEK	Q02763	1124 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	NR0B2	Q15466	257 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	MEX3C	Q5U5Q3	659 aa	Known RBP	4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	TMEM132E	Q6IEE7	984 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	ZNF655	Q8N720	491 aa	Predicted RBP	4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	DAGLB	Q8NCG7	672 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	RNF34	Q969K3	372 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	ATG4C	Q96DT6	458 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	TOX2	Q96NM4	488 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	FERD3L	Q96RJ6	166 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	HDAC8	Q9BY41	377 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	RNF32	Q9H0A6	362 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	DLC1	Q96QB1	1528 aa		4.05	□□□□□ -1.76
MUC1-215	ENST00000466913	MARF1	Q9Y4F3	1742 aa	Known RBP	4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	SPATA31A6	Q5VVP1	1343 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	TCAF2	A6NFQ2	919 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	RPL10	P27635	214 aa	Known RBP	4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	FANCC	Q00597	558 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	CLC	Q05315	142 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	SNX17	Q15036	470 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	NBPF9	Q3BBW0	867 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	WAPL	Q7Z5K2	1190 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	IRF2BP1	Q8IU81	584 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	VWCE	Q96DN2	955 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	TCTN2	Q96GX1	697 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	DHRS1	Q96LJ7	313 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	SLC6A18	Q96N87	628 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	ORAI2	Q96SN7	254 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	BACH2	Q9BYV9	841 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	FOXP3	Q9BZS1	431 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	CWC22	Q9HCG8	908 aa	Known RBP	4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	GPR160	Q9UJ42	338 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	ZMYM5	Q9UJ78	669 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	FBXL21	Q9UKT6	434 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	TCFL5	Q9UL49	500 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	ZNRF3	Q9ULT6	936 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	PCDHB12	Q9Y5F1	795 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	RGS12	O14924	1447 aa		4.04	□□□□□ -1.76
MUC1-215	ENST00000466913	PLCH1	Q4KWH8	1693 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	TOPAZ1	Q8N9V7	1692 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	DHX57	Q6P158	1386 aa	Known RBP	4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	ABCC11	Q96J66	1382 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	SIGLEC6	O43699	453 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	SYP	P08247	313 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	TMEM253	P0C7T8	217 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	TRHR	P34981	398 aa	Predicted RBP	4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	PDE6B	P35913	854 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	SLC14A2	Q15849	920 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	TMC3	Q7Z5M5	1100 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	SMARCC1	Q92922	1105 aa	Predicted RBP	4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	INTS4	Q96HW7	963 aa	Known RBP	4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	EAF1	Q96JC9	268 aa	Predicted RBP	4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	CHST7	Q9NS84	486 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	PRR13	Q9NZ81	148 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	TULP4	Q9NRJ4	1543 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	ITSN1	Q15811	1721 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	QRICH2	Q9H0J4	1663 aa		4.03	□□□□□ -1.76
MUC1-215	ENST00000466913	AFF2	P51816	1311 aa		4.02	□□□□□ -1.77
MUC1-215	ENST00000466913	KIAA1210	Q9ULL0	1709 aa		4.02	□□□□□ -1.77
MUC1-215	ENST00000466913	CRYBG1	Q9Y4K1	1723 aa		4.02	□□□□□ -1.77
MUC1-215	ENST00000466913	SCAMP3	O14828	347 aa	Known RBP	4.02	□□□□□ -1.77
MUC1-215	ENST00000466913	PRAMEF1	O95521	474 aa		4.02	□□□□□ -1.77
MUC1-215	ENST00000466913	VAMP1	P23763	118 aa		4.02	□□□□□ -1.77
MUC1-215	ENST00000466913	KIR2DL1	P43626	348 aa	Predicted RBP	4.02	□□□□□ -1.77
MUC1-215	ENST00000466913	KIR2DL2	P43627	348 aa	Predicted RBP	4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms