RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 CCT2P78371 535 aaKnown RBP16.78■□□□□ 0.28
SQSTM1-205ENST00000464493 FUT2Q10981 343 aa16.78■□□□□ 0.28
SQSTM1-205ENST00000464493 PRAMEF19Q5SWL8 479 aa16.78■□□□□ 0.28
SQSTM1-205ENST00000464493 SLC30A10Q6XR72 485 aa16.78■□□□□ 0.28
SQSTM1-205ENST00000464493 DEFB118Q96PH6 123 aa16.78■□□□□ 0.28
SQSTM1-205ENST00000464493 PURBQ96QR8 312 aaKnown RBP16.78■□□□□ 0.28
SQSTM1-205ENST00000464493 ADD3Q9UEY8 706 aaKnown RBP16.78■□□□□ 0.28
SQSTM1-205ENST00000464493 V9GY48 417 aaPredicted RBP16.78■□□□□ 0.28
SQSTM1-205ENST00000464493 CNTNAP5Q8WYK1 1306 aa16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 ASB14A6NK59 587 aa16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 OPLAHO14841 1288 aa16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 SGPL1O95470 568 aa16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 SNAI1O95863 264 aaPredicted RBP16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 CFBP00751 764 aa16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 CYBAP13498 195 aa16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 CNGA1P29973 690 aa16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 GJA8P48165 433 aa16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 SAMD3Q8N6K7 520 aa16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 TRPV1Q8NER1 839 aa16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 NRBP1Q9UHY1 535 aa16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 CNPY2Q9Y2B0 182 aa16.77■□□□□ 0.28
SQSTM1-205ENST00000464493 ASTN1O14525 1302 aa16.76■□□□□ 0.27
SQSTM1-205ENST00000464493 EN2P19622 333 aaPredicted RBP16.76■□□□□ 0.27
SQSTM1-205ENST00000464493 AK2P54819 239 aa16.76■□□□□ 0.27
SQSTM1-205ENST00000464493 ARMCX2Q7L311 632 aa16.76■□□□□ 0.27
SQSTM1-205ENST00000464493 DNERQ8NFT8 737 aa16.76■□□□□ 0.27
SQSTM1-205ENST00000464493 SYTL5Q8TDW5 730 aaPredicted RBP16.76■□□□□ 0.27
SQSTM1-205ENST00000464493 U2AF1L4Q8WU68 220 aaKnown RBP16.76■□□□□ 0.27
SQSTM1-205ENST00000464493 NCOA5Q9HCD5 579 aaKnown RBP16.76■□□□□ 0.27
SQSTM1-205ENST00000464493 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.76■□□□□ 0.27
SQSTM1-205ENST00000464493 MAP3K20Q9NYL2 800 aaKnown RBP16.76■□□□□ 0.27
SQSTM1-205ENST00000464493 TPCN1Q9ULQ1 816 aa16.76■□□□□ 0.27
SQSTM1-205ENST00000464493 LCTP09848 1927 aa16.76■□□□□ 0.27
SQSTM1-205ENST00000464493 RBBP6Q7Z6E9 1792 aaKnown RBP16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 LOC102724159A0A0B4J2E5 919 aa16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 TFRCP02786 760 aaKnown RBP16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 ALDH5A1P51649 535 aaPredicted RBP16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 HSD17B4P51659 736 aa16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 GHRHRQ02643 423 aa16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 STK3Q13188 491 aa16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 PWP2Q15269 919 aaKnown RBP16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 NTRK3Q16288 839 aa16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 KIF2CQ99661 725 aa16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 BACH2Q9BYV9 841 aa16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 ABHD16BQ9H3Z7 469 aa16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 MCM3APO60318 1980 aa16.75■□□□□ 0.27
SQSTM1-205ENST00000464493 GCOM1H8Y6P7 765 aaPredicted RBP16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 SEPT4O43236 478 aa16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 MSCO60682 206 aa16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 POLR2MP0CAP2 368 aa16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 ZNF865P0CJ78 1059 aaPredicted RBP16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 IFNAR1P17181 557 aa16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 CAPN2P17655 700 aa16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 ACVR2BQ13705 512 aa16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 LHX8Q68G74 356 aa16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 HEATR3Q7Z4Q2 680 aa16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 MORC4Q8TE76 937 aa16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 TAAR1Q96RJ0 339 aa16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 MPHOSPH6Q99547 160 aaKnown RBP16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 SLKQ9H2G2 1235 aaPredicted RBP16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 COL20A1Q9P218 1284 aa16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 DDX20Q9UHI6 824 aaKnown RBP16.74■□□□□ 0.27
SQSTM1-205ENST00000464493 B4DLN1 442 aa16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 CPLX1O14810 134 aa16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 PRPF3O43395 683 aaKnown RBP16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 HOXA13P31271 388 aaPredicted RBP16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 MRPL12P52815 198 aaKnown RBP16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 AKAP17AQ02040 695 aaKnown RBP16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 WWC2Q6AWC2 1192 aa16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 NSUN6Q8TEA1 469 aaKnown RBP16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 GPKOWQ92917 476 aaPredicted RBP eCLIP16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 PHKBQ93100 1093 aa16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 RMDN3Q96TC7 470 aa16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 CRISPLD2Q9H0B8 497 aa16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 RBM27Q9P2N5 1060 aaKnown RBP16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 ZHX1Q9UKY1 873 aaPredicted RBP16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 DDX49Q9Y6V7 483 aaKnown RBP16.73■□□□□ 0.27
SQSTM1-205ENST00000464493 PFKFB2O60825 505 aa16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 RGS19P49795 217 aa16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 SCRN1Q12765 414 aa16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 PFKFB3Q16875 520 aaPredicted RBP16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 ARHGEF16Q5VV41 709 aa16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 CPLX2Q6PUV4 134 aaKnown RBP16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 CUL5Q93034 780 aa16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 SHISA4Q96DD7 197 aa16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 SLC26A6Q9BXS9 759 aa16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 RNF26Q9BY78 433 aaPredicted RBP16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 KATNBL1Q9H079 304 aa16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 PSTPIP2Q9H939 334 aa16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 OGDHLQ9ULD0 1010 aa16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 FAM184BQ9ULE4 1060 aa16.72■□□□□ 0.27
SQSTM1-205ENST00000464493 hCG_1984214I3L0E3 225 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 PIK3CDO00329 1044 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 PPFIA3O75145 1194 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 SCG2P13521 617 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 AKR1A1P14550 325 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 EDNRBP24530 442 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 NAPAP54920 295 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 PDE4DQ08499 809 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms