RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 PDE4DQ08499 809 aa20.91■□□□□ 0.94
LINC00960-201ENST00000463183 RNF20Q5VTR2 975 aa20.91■□□□□ 0.94
LINC00960-201ENST00000463183 LY9Q9HBG7 655 aa20.91■□□□□ 0.94
LINC00960-201ENST00000463183 CCDC69A6NI79 296 aa20.9■□□□□ 0.94
LINC00960-201ENST00000463183 SMPD1P17405 629 aa20.9■□□□□ 0.94
LINC00960-201ENST00000463183 ACLYP53396 1101 aa20.9■□□□□ 0.94
LINC00960-201ENST00000463183 TROAPQ12815 778 aa20.9■□□□□ 0.94
LINC00960-201ENST00000463183 GNASQ5JWF2 1037 aa20.9■□□□□ 0.94
LINC00960-201ENST00000463183 TMEM63BQ5T3F8 832 aa20.9■□□□□ 0.94
LINC00960-201ENST00000463183 ZNF654Q8IZM8 581 aa20.9■□□□□ 0.94
LINC00960-201ENST00000463183 PIGSQ96S52 555 aa20.9■□□□□ 0.94
LINC00960-201ENST00000463183 AMNQ9BXJ7 453 aa20.9■□□□□ 0.94
LINC00960-201ENST00000463183 STARD7Q9NQZ5 370 aa20.9■□□□□ 0.94
LINC00960-201ENST00000463183 MRPL11Q9Y3B7 192 aaKnown RBP20.9■□□□□ 0.94
LINC00960-201ENST00000463183 BAZ2BQ9UIF8 2168 aaKnown RBP20.89■□□□□ 0.94
LINC00960-201ENST00000463183 MYH6P13533 1939 aa20.89■□□□□ 0.94
LINC00960-201ENST00000463183 SH2B2O14492 632 aaPredicted RBP20.89■□□□□ 0.93
LINC00960-201ENST00000463183 DYNC1LI2O43237 492 aaPredicted RBP20.89■□□□□ 0.93
LINC00960-201ENST00000463183 PQBP1O60828 265 aaKnown RBP20.89■□□□□ 0.93
LINC00960-201ENST00000463183 CFBP00751 764 aa20.89■□□□□ 0.93
LINC00960-201ENST00000463183 RXRAP19793 462 aa20.89■□□□□ 0.93
LINC00960-201ENST00000463183 TAPT1Q6NXT6 567 aa20.89■□□□□ 0.93
LINC00960-201ENST00000463183 TLK2Q86UE8 772 aa20.89■□□□□ 0.93
LINC00960-201ENST00000463183 KLHDC9Q8NEP7 349 aa20.89■□□□□ 0.93
LINC00960-201ENST00000463183 CTCFLQ8NI51 663 aaPredicted RBP20.89■□□□□ 0.93
LINC00960-201ENST00000463183 MPHOSPH6Q99547 160 aaKnown RBP20.89■□□□□ 0.93
LINC00960-201ENST00000463183 AP5M1Q9H0R1 490 aa20.89■□□□□ 0.93
LINC00960-201ENST00000463183 VTA1Q9NP79 307 aa20.89■□□□□ 0.93
LINC00960-201ENST00000463183 ZBTB5O15062 677 aa20.88■□□□□ 0.93
LINC00960-201ENST00000463183 PPP1R11O60927 126 aaPredicted RBP20.88■□□□□ 0.93
LINC00960-201ENST00000463183 ASGR1P07306 291 aa20.88■□□□□ 0.93
LINC00960-201ENST00000463183 GJA9P57773 515 aa20.88■□□□□ 0.93
LINC00960-201ENST00000463183 TLE2Q04725 743 aa20.88■□□□□ 0.93
LINC00960-201ENST00000463183 SLC35G1Q2M3R5 365 aa20.88■□□□□ 0.93
LINC00960-201ENST00000463183 MCF2L2Q86YR7 1114 aa20.88■□□□□ 0.93
LINC00960-201ENST00000463183 SYTL5Q8TDW5 730 aaPredicted RBP20.88■□□□□ 0.93
LINC00960-201ENST00000463183 TCEANC2Q96MN5 208 aa20.88■□□□□ 0.93
LINC00960-201ENST00000463183 PCDHA1Q9Y5I3 950 aa20.88■□□□□ 0.93
LINC00960-201ENST00000463183 MOXD2PA6NHM9 499 aa20.87■□□□□ 0.93
LINC00960-201ENST00000463183 PCSK9Q8NBP7 692 aaKnown RBP20.87■□□□□ 0.93
LINC00960-201ENST00000463183 TMEM87BQ96K49 555 aa20.87■□□□□ 0.93
LINC00960-201ENST00000463183 GLT1D1Q96MS3 346 aa20.87■□□□□ 0.93
LINC00960-201ENST00000463183 TAAR1Q96RJ0 339 aa20.87■□□□□ 0.93
LINC00960-201ENST00000463183 LBHD1Q9BQE6 289 aaPredicted RBP20.87■□□□□ 0.93
LINC00960-201ENST00000463183 TSEN34Q9BSV6 310 aaKnown RBP20.87■□□□□ 0.93
LINC00960-201ENST00000463183 UBE2OQ9C0C9 1292 aaKnown RBP20.87■□□□□ 0.93
LINC00960-201ENST00000463183 UPF3AQ9H1J1 476 aaKnown RBP20.87■□□□□ 0.93
LINC00960-201ENST00000463183 COL20A1Q9P218 1284 aa20.87■□□□□ 0.93
LINC00960-201ENST00000463183 LRRC37A2A6NM11 1700 aa20.87■□□□□ 0.93
LINC00960-201ENST00000463183 CYTH3O43739 400 aa20.86■□□□□ 0.93
LINC00960-201ENST00000463183 DDAH1O94760 285 aa20.86■□□□□ 0.93
LINC00960-201ENST00000463183 IQSEC1Q6DN90 963 aa20.86■□□□□ 0.93
LINC00960-201ENST00000463183 RASEFQ8IZ41 740 aa20.86■□□□□ 0.93
LINC00960-201ENST00000463183 DNERQ8NFT8 737 aa20.86■□□□□ 0.93
LINC00960-201ENST00000463183 MORC4Q8TE76 937 aa20.86■□□□□ 0.93
LINC00960-201ENST00000463183 NEK1Q96PY6 1258 aa20.86■□□□□ 0.93
LINC00960-201ENST00000463183 GDF15Q99988 308 aa20.86■□□□□ 0.93
LINC00960-201ENST00000463183 WDR11Q9BZH6 1224 aa20.86■□□□□ 0.93
LINC00960-201ENST00000463183 PRO3102Q9H379 93 aa20.86■□□□□ 0.93
LINC00960-201ENST00000463183 GNEQ9Y223 722 aaKnown RBP20.86■□□□□ 0.93
LINC00960-201ENST00000463183 EIF2AK2P19525 551 aaKnown RBP20.85■□□□□ 0.93
LINC00960-201ENST00000463183 HOXA13P31271 388 aaPredicted RBP20.85■□□□□ 0.93
LINC00960-201ENST00000463183 FXR1P51114 621 aaKnown RBP eCLIP20.85■□□□□ 0.93
LINC00960-201ENST00000463183 SNX17Q15036 470 aa20.85■□□□□ 0.93
LINC00960-201ENST00000463183 FSCN1Q16658 493 aaKnown RBP20.85■□□□□ 0.93
LINC00960-201ENST00000463183 ARHGEF16Q5VV41 709 aa20.85■□□□□ 0.93
LINC00960-201ENST00000463183 CCSAPQ6IQ19 270 aaPredicted RBP20.85■□□□□ 0.93
LINC00960-201ENST00000463183 CXCL17Q6UXB2 119 aa20.85■□□□□ 0.93
LINC00960-201ENST00000463183 CMTR1Q8N1G2 835 aaKnown RBP20.85■□□□□ 0.93
LINC00960-201ENST00000463183 RGS22Q8NE09 1264 aa20.85■□□□□ 0.93
LINC00960-201ENST00000463183 RMDN3Q96TC7 470 aa20.85■□□□□ 0.93
LINC00960-201ENST00000463183 RIOX1Q9H6W3 641 aa20.85■□□□□ 0.93
LINC00960-201ENST00000463183 SLC12A7Q9Y666 1083 aa20.85■□□□□ 0.93
LINC00960-201ENST00000463183 B4DLN1 442 aa20.84■□□□□ 0.93
LINC00960-201ENST00000463183 PLEKHA8P1O95397 391 aa20.84■□□□□ 0.93
LINC00960-201ENST00000463183 CST5P28325 142 aaPredicted RBP20.84■□□□□ 0.93
LINC00960-201ENST00000463183 KIF5BP33176 963 aa20.84■□□□□ 0.93
LINC00960-201ENST00000463183 MRPL12P52815 198 aaKnown RBP20.84■□□□□ 0.93
LINC00960-201ENST00000463183 ADCK5Q3MIX3 580 aa20.84■□□□□ 0.93
LINC00960-201ENST00000463183 SH3RF1Q7Z6J0 888 aa20.84■□□□□ 0.93
LINC00960-201ENST00000463183 MICU3Q86XE3 530 aa20.84■□□□□ 0.93
LINC00960-201ENST00000463183 MTMR8Q96EF0 704 aa20.84■□□□□ 0.93
LINC00960-201ENST00000463183 PDLIM7Q9NR12 457 aa20.84■□□□□ 0.93
LINC00960-201ENST00000463183 PPP4R2Q9NY27 417 aa20.84■□□□□ 0.93
LINC00960-201ENST00000463183 CTAGE5O15320 804 aa20.83■□□□□ 0.93
LINC00960-201ENST00000463183 PPP2R5BQ15173 497 aa20.83■□□□□ 0.93
LINC00960-201ENST00000463183 SEPT14Q6ZU15 432 aa20.83■□□□□ 0.93
LINC00960-201ENST00000463183 TMTC2Q8N394 836 aa20.83■□□□□ 0.93
LINC00960-201ENST00000463183 CCDC82Q8N4S0 544 aa20.83■□□□□ 0.93
LINC00960-201ENST00000463183 OR6J1Q8NGC5 347 aa20.83■□□□□ 0.93
LINC00960-201ENST00000463183 NSUN6Q8TEA1 469 aaKnown RBP20.83■□□□□ 0.93
LINC00960-201ENST00000463183 COPS5Q92905 334 aa20.83■□□□□ 0.93
LINC00960-201ENST00000463183 MTA3Q9BTC8 594 aa20.83■□□□□ 0.93
LINC00960-201ENST00000463183 NAP1L2Q9ULW6 460 aaPredicted RBP20.83■□□□□ 0.93
LINC00960-201ENST00000463183 LAMA3Q16787 3333 aa20.83■□□□□ 0.92
LINC00960-201ENST00000463183 LOC102724159A0A0B4J2E5 919 aa20.82■□□□□ 0.92
LINC00960-201ENST00000463183 PNMA6FA0A0J9YX94 578 aa20.82■□□□□ 0.92
LINC00960-201ENST00000463183 OPLAHO14841 1288 aa20.82■□□□□ 0.92
LINC00960-201ENST00000463183 CLTBP09497 229 aa20.82■□□□□ 0.92
LINC00960-201ENST00000463183 EDNRBP24530 442 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms