RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 SMCO2A6NFE2 343 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 GRXCR2A6NFK2 248 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 TRIM75PA6NK02 468 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 C19orf81C9J6K1 198 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 YEATS4O95619 227 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 ADCY7P51828 1080 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 BACE1P56817 501 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 UBE2HP62256 183 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 CEBPZQ03701 1054 aaKnown RBP9.37□□□□□ -0.91
RPA3-205ENST00000462723 MTMR2Q13614 643 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 STK38Q15208 465 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 SF3A1Q15459 793 aaKnown RBP9.37□□□□□ -0.91
RPA3-205ENST00000462723 NPY5RQ15761 445 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 ANO1Q5XXA6 986 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 DLK2Q6UY11 383 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.37□□□□□ -0.91
RPA3-205ENST00000462723 ARMC9Q7Z3E5 817 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 LDHDQ86WU2 507 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 FBXO11Q86XK2 927 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 ANKRD13AQ8IZ07 590 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 RBM46Q8TBY0 533 aaKnown RBP9.37□□□□□ -0.91
RPA3-205ENST00000462723 KCNG4Q8TDN1 519 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 USP28Q96RU2 1077 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 ANP32EQ9BTT0 268 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 AMNQ9BXJ7 453 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 GLT8D2Q9H1C3 349 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 TMOD4Q9NZQ9 345 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 RCOR1Q9UKL0 485 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 PRR12Q9ULL5 1215 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 SNCAIPQ9Y6H5 919 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 CCDC194A0A1B0GVG4 234 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 PPP1R11O60927 126 aaPredicted RBP9.36□□□□□ -0.91
RPA3-205ENST00000462723 TRAPPC10P48553 1259 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 NASPP49321 788 aaPredicted RBP9.36□□□□□ -0.91
RPA3-205ENST00000462723 MRPL12P52815 198 aaKnown RBP9.36□□□□□ -0.91
RPA3-205ENST00000462723 KLHL40Q2TBA0 621 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 MAP1SQ66K74 1059 aaPredicted RBP9.36□□□□□ -0.91
RPA3-205ENST00000462723 KRT25Q7Z3Z0 450 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 REXO1Q8N1G1 1221 aaKnown RBP9.36□□□□□ -0.91
RPA3-205ENST00000462723 JMYQ8N9B5 988 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 ZNF516Q92618 1163 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 CUL5Q93034 780 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 TNFRSF25Q93038 417 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 KIFC2Q96AC6 838 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 COA7Q96BR5 231 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 SLF1Q9BQI6 1058 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 CEP131Q9UPN4 1083 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 PCDHA1Q9Y5I3 950 aa9.36□□□□□ -0.91
RPA3-205ENST00000462723 UNCXA6NJT0 531 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 SPTLC2O15270 562 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 GADD45BO75293 160 aaPredicted RBP9.35□□□□□ -0.91
RPA3-205ENST00000462723 BMP15O95972 392 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 VCAM1P19320 739 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 ME1P48163 572 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 HMGCS2P54868 508 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 PPATQ06203 517 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 SLC39A14Q15043 492 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 MAP3K11Q16584 847 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 TREML4Q6UXN2 200 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 PIK3AP1Q6ZUJ8 805 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 ERO1BQ86YB8 467 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 TEX2Q8IWB9 1127 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 PRPF38AQ8NAV1 312 aaKnown RBP9.35□□□□□ -0.91
RPA3-205ENST00000462723 LINC00301Q8NCQ3 95 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 DDX12PQ92771 950 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 C12orf42Q96LP6 360 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 EPAS1Q99814 870 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 FTOQ9C0B1 505 aaKnown RBP eCLIP9.35□□□□□ -0.91
RPA3-205ENST00000462723 RANBP17Q9H2T7 1088 aaKnown RBP9.35□□□□□ -0.91
RPA3-205ENST00000462723 RPAP3Q9H6T3 665 aaPredicted RBP9.35□□□□□ -0.91
RPA3-205ENST00000462723 PSTPIP2Q9H939 334 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 ELP3Q9H9T3 547 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 RIC8AQ9NPQ8 531 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 PNMA2Q9UL42 364 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 PCDHA6Q9UN73 950 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 AFG3L2Q9Y4W6 797 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 CTDP1Q9Y5B0 961 aaPredicted RBP9.35□□□□□ -0.91
RPA3-205ENST00000462723 PCDHA8Q9Y5H6 950 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 CLIC4Q9Y696 253 aa9.35□□□□□ -0.91
RPA3-205ENST00000462723 SPDYE5A6NIY4 337 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 M0R2N6 131 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 FLOT1O75955 427 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 FDX1P10109 184 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 ATP2B1P20020 1258 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 TOB1P50616 345 aaPredicted RBP9.34□□□□□ -0.91
RPA3-205ENST00000462723 SNAP25P60880 206 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 FKBP1BP68106 108 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 NONOQ15233 471 aaKnown RBP eCLIP9.34□□□□□ -0.91
RPA3-205ENST00000462723 USH1GQ495M9 461 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 SH3D19Q5HYK7 790 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 TTC38Q5R3I4 469 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 MCTP2Q6DN12 878 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 CCDC174Q6PII3 467 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 KRI1Q8N9T8 703 aaKnown RBP9.34□□□□□ -0.91
RPA3-205ENST00000462723 GPT2Q8TD30 523 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 ZNF526Q8TF50 670 aaPredicted RBP9.34□□□□□ -0.91
RPA3-205ENST00000462723 SYAP1Q96A49 352 aaPredicted RBP9.34□□□□□ -0.91
RPA3-205ENST00000462723 ZNF408Q9H9D4 720 aa9.34□□□□□ -0.91
RPA3-205ENST00000462723 NMRK2Q9NPI5 230 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms