RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CTAGE6Q86UF2 777 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 CTAGE4Q8IX94 777 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 NOC4LQ9BVI4 516 aaKnown RBP18.94■□□□□ 0.62
ACTB-207ENST00000462494 FUT8Q9BYC5 575 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 MYO6Q9UM54 1294 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 CLEC10AQ8IUN9 316 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 FAM114A1Q8IWE2 563 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 FNBP4Q8N3X1 1017 aaPredicted RBP18.93■□□□□ 0.62
ACTB-207ENST00000462494 TBC1D16Q8TBP0 767 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 PNKPQ96T60 521 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 GPCPD1Q9NPB8 672 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 LRWD1Q9UFC0 647 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 ENC1O14682 589 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 OAS2P29728 719 aaKnown RBP18.93■□□□□ 0.62
ACTB-207ENST00000462494 GTF2IP78347 998 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 WHAMMP3Q1A5X7 153 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 CRY2Q49AN0 593 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 CCDC122Q5T0U0 273 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 NCAPH2Q6IBW4 605 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 CNNM4Q6P4Q7 775 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 SV2BQ7L1I2 683 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 KIAA1328Q86T90 577 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 CDK5RAP3Q96JB5 506 aa18.93■□□□□ 0.62
ACTB-207ENST00000462494 ZCCHC17Q9NP64 241 aaKnown RBP18.93■□□□□ 0.62
ACTB-207ENST00000462494 ZNHIT6Q9NWK9 470 aaKnown RBP18.93■□□□□ 0.62
ACTB-207ENST00000462494 RIMBP2O15034 1052 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 SMARCA1P28370 1054 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 HERVK_113P62684 666 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 DYMQ7RTS9 669 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 KIAA0895Q8NCT3 520 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 CERKQ8TCT0 537 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 TBC1D22AQ8WUA7 517 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 FAM163AQ96GL9 167 aaPredicted RBP18.92■□□□□ 0.62
ACTB-207ENST00000462494 HAUS4Q9H6D7 363 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 RIOX1Q9H6W3 641 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 POTEB2H3BUK9 544 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 SLC37A4O43826 429 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 TDP2O95551 362 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 GYS1P13807 737 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 ADCY7P51828 1080 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 MCM6Q14566 821 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 DPP8Q6V1X1 898 aaPredicted RBP18.92■□□□□ 0.62
ACTB-207ENST00000462494 ZBTB9Q96C00 473 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 MTMR4Q9NYA4 1195 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 DAGLAQ9Y4D2 1042 aa18.92■□□□□ 0.62
ACTB-207ENST00000462494 GAKO14976 1311 aa18.91■□□□□ 0.62
ACTB-207ENST00000462494 RASSF10A6NK89 507 aa18.91■□□□□ 0.62
ACTB-207ENST00000462494 NKRFO15226 690 aaKnown RBP eCLIP18.91■□□□□ 0.626e-13■□□□□ 9.5
ACTB-207ENST00000462494 AKR1B1P15121 316 aa18.91■□□□□ 0.62
ACTB-207ENST00000462494 KRT83P78385 493 aa18.91■□□□□ 0.62
ACTB-207ENST00000462494 GRB10Q13322 594 aa18.91■□□□□ 0.62
ACTB-207ENST00000462494 NUP58Q9BVL2 599 aa18.91■□□□□ 0.62
ACTB-207ENST00000462494 HDAC6Q9UBN7 1215 aa18.91■□□□□ 0.62
ACTB-207ENST00000462494 POTEMA6NI47 508 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 BBOX1O75936 387 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 AMPD2Q01433 879 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 TMEM266Q2M3C6 531 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 MTMR9Q96QG7 549 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 TTYH3Q9C0H2 523 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 SEMA6BQ9H3T3 888 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 NHEJ1Q9H9Q4 299 aaPredicted RBP18.9■□□□□ 0.62
ACTB-207ENST00000462494 ESYT2A0FGR8 921 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 MYMKA6NI61 221 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 CYLC1P35663 651 aaPredicted RBP18.9■□□□□ 0.62
ACTB-207ENST00000462494 TNNI2P48788 182 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 MIIPQ5JXC2 388 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 FKBP15Q5T1M5 1219 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 MSANTD4Q8NCY6 345 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 UBXN6Q9BZV1 441 aa18.9■□□□□ 0.62
ACTB-207ENST00000462494 IPO7O95373 1038 aaKnown RBP18.89■□□□□ 0.61
ACTB-207ENST00000462494 PPP1R2P41236 205 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 TUBB4BP68371 445 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 ZBED6P86452 979 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 MEA1Q16626 185 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 ASPRV1Q53RT3 343 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 NOA1Q8NC60 698 aaKnown RBP18.89■□□□□ 0.61
ACTB-207ENST00000462494 LARP4BQ92615 738 aaKnown RBP18.89■□□□□ 0.61
ACTB-207ENST00000462494 JAKMIP2Q96AA8 810 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 BLOC1S4Q9NUP1 217 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 LY75O60449 1722 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 ERLIN1O75477 346 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 IDEP14735 1019 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 ADRA2BP18089 450 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 NOVP48745 357 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 ATP2B2Q01814 1243 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 ORC2Q13416 577 aaPredicted RBP18.89■□□□□ 0.61
ACTB-207ENST00000462494 UBE2SQ16763 222 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 RETREG2Q8NC44 543 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 PNMA5Q96PV4 448 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 ABCB6Q9NP58 842 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 PODXL2Q9NZ53 605 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 RAB21Q9UL25 225 aa18.89■□□□□ 0.61
ACTB-207ENST00000462494 hCG_1984214I3L0E3 225 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 PSMD14O00487 310 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 KRT86O43790 486 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 ATP1A1P05023 1023 aaKnown RBP18.88■□□□□ 0.61
ACTB-207ENST00000462494 BEND6Q5SZJ8 279 aaPredicted RBP18.88■□□□□ 0.61
ACTB-207ENST00000462494 ZNF713Q8N859 430 aaPredicted RBP18.88■□□□□ 0.61
ACTB-207ENST00000462494 SNX29Q8TEQ0 813 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 UBAP1LF5GYI3 381 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms