RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 SRPRBQ9Y5M8 271 aaKnown RBP15.15■□□□□ 0.02
TOP3B-213ENST00000457179 TNRC6CQ9HCJ0 1690 aaKnown RBP15.14■□□□□ 0.01
TOP3B-213ENST00000457179 AKR1B15C9JRZ8 316 aaPredicted RBP15.14■□□□□ 0.01
TOP3B-213ENST00000457179 CYTH3O43739 400 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 CALM1P0DP23 149 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 CALM2P0DP24 149 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 CALM3P0DP25 149 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 AKR1B1P15121 316 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 RDXP35241 583 aaKnown RBP15.14■□□□□ 0.01
TOP3B-213ENST00000457179 IRAK1P51617 712 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 NAPAP54920 295 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 FUT2Q10981 343 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 IKQ13123 557 aaPredicted RBP15.14■□□□□ 0.01
TOP3B-213ENST00000457179 CCDC96Q2M329 555 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 CCDC148Q8NFR7 591 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 MASTLQ96GX5 879 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 NAPGQ99747 312 aaPredicted RBP15.14■□□□□ 0.01
TOP3B-213ENST00000457179 SLC24A3Q9HC58 644 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 POLD4Q9HCU8 107 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 IRS2Q9Y4H2 1338 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 COL5A3P25940 1745 aaPredicted RBP15.14■□□□□ 0.01
TOP3B-213ENST00000457179 GPR75-ASB3A0A0A6YYF3 556 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 CCDC194A0A1B0GVG4 234 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 PRPF3O43395 683 aaKnown RBP15.14■□□□□ 0.01
TOP3B-213ENST00000457179 IL1R1P14778 569 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 TTC38Q5R3I4 469 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 MED15Q96RN5 788 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 CNTNAP5Q8WYK1 1306 aa15.14■□□□□ 0.01
TOP3B-213ENST00000457179 CLRN2A0PK11 232 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 PP2D1A8MPX8 630 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 ACTN4O43707 911 aaKnown RBP15.13■□□□□ 0.01
TOP3B-213ENST00000457179 HOXA10P31260 410 aaPredicted RBP15.13■□□□□ 0.01
TOP3B-213ENST00000457179 GNGT1P63211 74 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 KCTD1Q719H9 257 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 PPFIBP1Q86W92 1011 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 CEP131Q9UPN4 1083 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 TEX33O43247 280 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 SNAP25P60880 206 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 LETM2Q2VYF4 491 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 LRCH2Q5VUJ6 765 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 TBC1D22AQ8WUA7 517 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 N4BP2L2Q92802 583 aaPredicted RBP15.13■□□□□ 0.01
TOP3B-213ENST00000457179 COA7Q96BR5 231 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 CAPZA3Q96KX2 299 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 ZBTB12Q9Y330 459 aaPredicted RBP15.13■□□□□ 0.01
TOP3B-213ENST00000457179 ENC1O14682 589 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 DDAH1O94760 285 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 GDF11O95390 407 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 RBL2Q08999 1139 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 SBK1Q52WX2 424 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 MSL3Q8N5Y2 521 aaKnown RBP15.13■□□□□ 0.01
TOP3B-213ENST00000457179 TEKT1Q969V4 418 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 AKT1S1Q96B36 256 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 CABS1Q96KC9 395 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 PIGSQ96S52 555 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 PHF20Q9BVI0 1012 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 COA1Q9GZY4 146 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 TDRD3Q9H7E2 651 aaKnown RBP15.13■□□□□ 0.01
TOP3B-213ENST00000457179 BIN2Q9UBW5 565 aaPredicted RBP15.13■□□□□ 0.01
TOP3B-213ENST00000457179 FAM205AQ6ZU69 1335 aa15.13■□□□□ 0.01
TOP3B-213ENST00000457179 FRMD3A2A2Y4 597 aa15.12■□□□□ 0.01
TOP3B-213ENST00000457179 PARP1P09874 1014 aaKnown RBP15.12■□□□□ 0.01
TOP3B-213ENST00000457179 CD44P16070 742 aaKnown RBP15.12■□□□□ 0.01
TOP3B-213ENST00000457179 SLF2Q8IX21 1173 aa15.12■□□□□ 0.01
TOP3B-213ENST00000457179 CACNA1SQ13698 1873 aa15.12■□□□□ 0.01
TOP3B-213ENST00000457179 PPIP5K2O43314 1243 aa15.12■□□□□ 0.01
TOP3B-213ENST00000457179 NEBLO76041 1014 aa15.12■□□□□ 0.01
TOP3B-213ENST00000457179 KIAA0754O94854 1291 aa15.12■□□□□ 0.01
TOP3B-213ENST00000457179 CAPS2Q9BXY5 557 aa15.12■□□□□ 0.01
TOP3B-213ENST00000457179 FAM237AA0A1B0GTK4 181 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 CCT6AP40227 531 aaKnown RBP15.11■□□□□ 0.01
TOP3B-213ENST00000457179 SLC35G1Q2M3R5 365 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 TTBK2Q6IQ55 1244 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 CDC42EP5Q6NZY7 148 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 ZNF287Q9HBT7 754 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 HDAC6Q9UBN7 1215 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 MAD2L2Q9UI95 211 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 SERPINB13Q9UIV8 391 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 CCDC189A1A4V9 331 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 PLSCR1O15162 318 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 ZBTB7AO95365 584 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 PLCG2P16885 1265 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 MORC3Q14149 939 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 RBM26Q5T8P6 1007 aaKnown RBP15.11■□□□□ 0.01
TOP3B-213ENST00000457179 SPICE1Q8N0Z3 855 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 OTUD6BQ8N6M0 293 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 SEC63Q9UGP8 760 aaKnown RBP15.11■□□□□ 0.01
TOP3B-213ENST00000457179 MYO6Q9UM54 1294 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 ECE2O60344 883 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 PPP4CP60510 307 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 WHAMMP3Q1A5X7 153 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 FKBP15Q5T1M5 1219 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 DGKHQ86XP1 1220 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 PAGE5Q96GU1 130 aa15.11■□□□□ 0.01
TOP3B-213ENST00000457179 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
TOP3B-213ENST00000457179 PES1O00541 588 aaKnown RBP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 SRGAP2O75044 1071 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 TAL1P17542 331 aaPredicted RBP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 NF2P35240 595 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms