RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 CHRM1P11229 460 aaPredicted RBP15.22■□□□□ 0.03
PTPRE-204ENST00000455661 NR1D1P20393 614 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 CYP7A1P22680 504 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 HNRNPH3P31942 346 aaKnown RBP15.22■□□□□ 0.03
PTPRE-204ENST00000455661 EMC10Q5UCC4 262 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 IQCKQ8N0W5 287 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 GIMAP7Q8NHV1 300 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 SDR42E1Q8WUS8 393 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 PLEKP08567 350 aaPredicted RBP15.22■□□□□ 0.03
PTPRE-204ENST00000455661 GUCY1A3Q02108 690 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 PLCB4Q15147 1175 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 ZSCAN29Q8IWY8 852 aaPredicted RBP15.22■□□□□ 0.03
PTPRE-204ENST00000455661 CD302Q8IX05 232 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 C4orf32Q8N8J7 132 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 CABLES1Q8TDN4 633 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 RBM12Q9NTZ6 932 aaKnown RBP15.22■□□□□ 0.03
PTPRE-204ENST00000455661 GGA2Q9UJY4 613 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 BCORQ6W2J9 1755 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 C1orf167Q5SNV9 1468 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 MAGEB6P1A0A0J9YX57 407 aa15.21■□□□□ 0.03
PTPRE-204ENST00000455661 LCA5LO95447 670 aa15.21■□□□□ 0.03
PTPRE-204ENST00000455661 EIF4A3P38919 411 aaKnown RBP15.21■□□□□ 0.03
PTPRE-204ENST00000455661 MAGEA1P43355 309 aa15.21■□□□□ 0.03
PTPRE-204ENST00000455661 PTGISQ16647 500 aa15.21■□□□□ 0.03
PTPRE-204ENST00000455661 NAALADL2Q58DX5 795 aa15.21■□□□□ 0.03
PTPRE-204ENST00000455661 ANKRD40Q6AI12 368 aa15.21■□□□□ 0.03
PTPRE-204ENST00000455661 SRBD1Q8N5C6 995 aaKnown RBP15.21■□□□□ 0.03
PTPRE-204ENST00000455661 IFT81Q8WYA0 676 aa15.21■□□□□ 0.03
PTPRE-204ENST00000455661 GDF3Q9NR23 364 aa15.21■□□□□ 0.03
PTPRE-204ENST00000455661 KBTBD4Q9NVX7 518 aa15.21■□□□□ 0.03
PTPRE-204ENST00000455661 SMARCAL1Q9NZC9 954 aa15.21■□□□□ 0.03
PTPRE-204ENST00000455661 ARHGAP20Q9P2F6 1191 aa15.21■□□□□ 0.03
PTPRE-204ENST00000455661 HMGB1P1B2RPK0 211 aaPredicted RBP15.21■□□□□ 0.02
PTPRE-204ENST00000455661 KIF1CO43896 1103 aaKnown RBP15.21■□□□□ 0.02
PTPRE-204ENST00000455661 NKX1-1Q15270 411 aaPredicted RBP15.21■□□□□ 0.02
PTPRE-204ENST00000455661 HLFQ16534 295 aa15.21■□□□□ 0.02
PTPRE-204ENST00000455661 PFKFB3Q16875 520 aaPredicted RBP15.21■□□□□ 0.02
PTPRE-204ENST00000455661 MIIPQ5JXC2 388 aa15.21■□□□□ 0.02
PTPRE-204ENST00000455661 NLRP14Q86W24 1093 aa15.21■□□□□ 0.02
PTPRE-204ENST00000455661 MREGQ8N565 214 aa15.21■□□□□ 0.02
PTPRE-204ENST00000455661 NOX5Q96PH1 765 aa15.21■□□□□ 0.02
PTPRE-204ENST00000455661 CCT8L2Q96SF2 557 aa15.21■□□□□ 0.02
PTPRE-204ENST00000455661 VCPKMTQ9H867 229 aa15.21■□□□□ 0.02
PTPRE-204ENST00000455661 DONSONQ9NYP3 566 aa15.21■□□□□ 0.02
PTPRE-204ENST00000455661 EHD2Q9NZN4 543 aa15.21■□□□□ 0.02
PTPRE-204ENST00000455661 NFU1Q9UMS0 254 aa15.21■□□□□ 0.02
PTPRE-204ENST00000455661 TNS2Q63HR2 1409 aa15.21■□□□□ 0.02
PTPRE-204ENST00000455661 ZNF233A6NK53 670 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 SRRM3A6NNA2 597 aaPredicted RBP15.2■□□□□ 0.02
PTPRE-204ENST00000455661 STARD3NLO95772 234 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 PCP11498 1178 aaKnown RBP15.2■□□□□ 0.02
PTPRE-204ENST00000455661 MDH1P40925 334 aaKnown RBP15.2■□□□□ 0.02
PTPRE-204ENST00000455661 CDR1P51861 262 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 SMTNP53814 917 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 ACTN3Q08043 901 aaPredicted RBP15.2■□□□□ 0.02
PTPRE-204ENST00000455661 PDE4DQ08499 809 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 DRP2Q13474 957 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 BLIDQ8IZY5 108 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 C1orf131Q8NDD1 294 aaKnown RBP15.2■□□□□ 0.02
PTPRE-204ENST00000455661 EEF2KMTQ96G04 330 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 ATP6V1G3Q96LB4 118 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 CCSER1Q9C0I3 900 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 CUEDC2Q9H467 287 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 MAGEF1Q9HAY2 307 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 EPB41L5Q9HCM4 733 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 KLC4Q9NSK0 619 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 CEP83Q9Y592 693 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 PAPPAQ13219 1627 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 MYH3P11055 1940 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 GOLGA6L10A6NI86 522 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 PJA2O43164 708 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 NCK2O43639 380 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 HEXIM1O94992 359 aaKnown RBP15.2■□□□□ 0.02
PTPRE-204ENST00000455661 CARSP49589 748 aaKnown RBP15.2■□□□□ 0.02
PTPRE-204ENST00000455661 GUCY2DQ02846 1103 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 RNF10Q8N5U6 811 aaKnown RBP15.2■□□□□ 0.02
PTPRE-204ENST00000455661 ARFGAP2Q8N6H7 521 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 PLIN2Q99541 437 aa15.2■□□□□ 0.02
PTPRE-204ENST00000455661 ADAMTSL3P82987 1691 aa15.19■□□□□ 0.02
PTPRE-204ENST00000455661 ARAP2Q8WZ64 1704 aa15.19■□□□□ 0.02
PTPRE-204ENST00000455661 NEDD9Q14511 834 aa15.19■□□□□ 0.02
PTPRE-204ENST00000455661 CCDC40Q4G0X9 1142 aa15.19■□□□□ 0.02
PTPRE-204ENST00000455661 DNAJC10Q8IXB1 793 aa15.19■□□□□ 0.02
PTPRE-204ENST00000455661 MYCBPAPQ8TBZ2 947 aa15.19■□□□□ 0.02
PTPRE-204ENST00000455661 WHAMMQ8TF30 809 aa15.19■□□□□ 0.02
PTPRE-204ENST00000455661 GOLGA6L7A0A1B0GV03 622 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 FAM107AO95990 144 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 GLI1P08151 1106 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 BCAMP50895 628 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 IFT88Q13099 833 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 CCDC178Q5BJE1 867 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 PPP4R3AQ6IN85 833 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 CCDC84Q86UT8 332 aaPredicted RBP15.18■□□□□ 0.02
PTPRE-204ENST00000455661 TLR10Q9BXR5 811 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 CCDC194A0A1B0GVG4 234 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 PP2D1A8MPX8 630 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 E7EVH7 732 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 FAM153BP0C7A2 387 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 FAM153CQ494X1 144 aa15.18■□□□□ 0.02
PTPRE-204ENST00000455661 VWA3BQ502W6 1294 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms