RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SIAH1Q8IUQ4 282 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 C7orf61Q8IZ16 206 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 STK11IPQ8N1F8 1099 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 NPLOC4Q8TAT6 608 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 USP6NLQ92738 828 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 PURBQ96QR8 312 aaKnown RBP5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 CRNKL1Q9BZJ0 848 aaKnown RBP5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 EHD4Q9H223 541 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 RPAP3Q9H6T3 665 aaPredicted RBP5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 CWC22Q9HCG8 908 aaKnown RBP5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 GINM1Q9NU53 330 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 PAG1Q9NWQ8 432 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 ZMYND8Q9ULU4 1186 aaPredicted RBP5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 RABGAP1Q9Y3P9 1069 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 COL11A1P12107 1806 aaPredicted RBP5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 DDX60LQ5H9U9 1706 aaKnown RBP5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 SOX1O00570 391 aaPredicted RBP5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 IGSF3O75054 1194 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 RAB11FIP3O75154 756 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 MBD4O95243 580 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 ADH1AP07327 375 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 XRCC5P13010 732 aaKnown RBP5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 AKR1B1P15121 316 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 ATP5JP18859 108 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 CNGA1P29973 690 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 MAPK4P31152 587 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 CYP2C19P33261 490 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 ADD2P35612 726 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 RGS2P41220 211 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 SERPINB4P48594 390 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 CDK8P49336 464 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 USP14P54578 494 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 RELBQ01201 579 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 PDE3AQ14432 1141 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 PRAMEF19Q5SWL8 479 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 MAP3K21Q5TCX8 1036 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 TSHZ3Q63HK5 1081 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 B4GALNT3Q6L9W6 998 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 SPICE1Q8N0Z3 855 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 HPS1Q92902 700 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 C12orf42Q96LP6 360 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 KIAA1683Q9H0B3 1180 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 PUS7LQ9H0K6 701 aaKnown RBP5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 PRO3102Q9H379 93 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 C11orf49Q9H6J7 331 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 TOR4AQ9NXH8 423 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 OGDHLQ9ULD0 1010 aa5.65□□□□□ -1.5
GTF3C3-208ENST00000455546 MYO9BQ13459 2157 aa5.65□□□□□ -1.51
GTF3C3-208ENST00000455546 COBLO75128 1261 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 IL2RAP01589 272 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 TIMP2P16035 220 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 ZKSCAN1P17029 563 aaPredicted RBP5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 CCNA1P78396 465 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 ATP2B2Q01814 1243 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 PLS1Q14651 629 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 COG2Q14746 738 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 OCLNQ16625 522 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 C12orf60Q5U649 245 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 ANO1Q5XXA6 986 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 CTR9Q6PD62 1173 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 CAPN12Q6ZSI9 719 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 CERS3Q8IU89 383 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 KDF1Q8NAX2 398 aaPredicted RBP5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 TRPV1Q8NER1 839 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 SOCS4Q8WXH5 440 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 HAUS7Q99871 368 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 MOV10L1Q9BXT6 1211 aaKnown RBP5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 LRRCC1Q9C099 1032 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 TANGO6Q9C0B7 1094 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 SENP6Q9GZR1 1112 aaPredicted RBP5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 TSPAN10Q9H1Z9 355 aaPredicted RBP5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 ZNF395Q9H8N7 513 aaPredicted RBP5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 HOXC10Q9NYD6 342 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 CXXC1Q9P0U4 656 aaPredicted RBP5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 USP3Q9Y6I4 520 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 SLC4A4Q9Y6R1 1079 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 PFASO15067 1338 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 PARP14Q460N5 1801 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 FRMPD3Q5JV73 1810 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 PLXNA1Q9UIW2 1896 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 MYH4Q9Y623 1939 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 MCM3APO60318 1980 aa5.64□□□□□ -1.51
GTF3C3-208ENST00000455546 SLC15A5A6NIM6 579 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 MINDY4BA8MYZ0 360 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 MEN1O00255 615 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 FLOT1O75955 427 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 EEF2P13639 858 aaKnown RBP5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 ERCC3P19447 782 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 UBE3CQ15386 1083 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 TLR1Q15399 786 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 LRRC26Q2I0M4 334 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 GJC2Q5T442 439 aaPredicted RBP5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 TMCO4Q5TGY1 634 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 MFSD14CQ5VZR4 134 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 LBX2Q6XYB7 198 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 TMEM179Q6ZVK1 233 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 DPP9Q86TI2 863 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 NCAPG2Q86XI2 1143 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 GTF3C2Q8WUA4 911 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms