RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 RHBDL3P58872 404 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 KCNJ2P63252 427 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 TRPM8Q7Z2W7 1104 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 NANOGNBQ7Z5D8 188 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 AIDAQ96BJ3 306 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 CENPTQ96BT3 561 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 FAM136AQ96C01 138 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 CHMP6Q96FZ7 201 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 NRDE2Q9H7Z3 1164 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.81□□□□□ -0.52
LINC00342-202ENST00000448494 DMGDHQ9UI17 866 aaKnown RBP11.81□□□□□ -0.52
LINC00342-202ENST00000448494 ITIH6Q6UXX5 1313 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 ADGRB1O14514 1584 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 SAMD9LQ8IVG5 1584 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 NPATQ14207 1427 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 ANKARQ7Z5J8 1434 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 TRIM43BA6NCK2 446 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 EIF3FO00303 357 aaPredicted RBP11.81□□□□□ -0.52
LINC00342-202ENST00000448494 SRGAP2O75044 1071 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 SUPT3HO75486 399 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 MSH2P43246 934 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 NCALDP61601 193 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 GSTM4Q03013 218 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 MCL1Q07820 350 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 STK3Q13188 491 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 STK38Q15208 465 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 SLC44A4Q53GD3 710 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 TBC1D9BQ66K14 1250 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 CFAP61Q8NHU2 1237 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 ATP8B4Q8TF62 1192 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 PRCCQ92733 491 aaPredicted RBP11.81□□□□□ -0.52
LINC00342-202ENST00000448494 HIC2Q96JB3 615 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 CLMNQ96JQ2 1002 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 NR1H4Q96RI1 486 aaPredicted RBP11.81□□□□□ -0.52
LINC00342-202ENST00000448494 LRRC1Q9BTT6 524 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 SIL1Q9H173 461 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 ARHGEF3Q9NR81 526 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 POLR3EQ9NVU0 708 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 R3HDM2Q9Y2K5 976 aaKnown RBP11.81□□□□□ -0.52
LINC00342-202ENST00000448494 ATP7BP35670 1465 aa11.8□□□□□ -0.52
LINC00342-202ENST00000448494 ENC1O14682 589 aa11.8□□□□□ -0.52
LINC00342-202ENST00000448494 PFKFB1P16118 471 aa11.8□□□□□ -0.52
LINC00342-202ENST00000448494 FUT4P22083 530 aa11.8□□□□□ -0.52
LINC00342-202ENST00000448494 CALB2P22676 271 aa11.8□□□□□ -0.52
LINC00342-202ENST00000448494 HPDP32754 393 aaPredicted RBP11.8□□□□□ -0.52
LINC00342-202ENST00000448494 USP11P51784 963 aa11.8□□□□□ -0.52
LINC00342-202ENST00000448494 PPP2R2AP63151 447 aa11.8□□□□□ -0.52
LINC00342-202ENST00000448494 MAP4K1Q92918 833 aa11.8□□□□□ -0.52
LINC00342-202ENST00000448494 ABHD8Q96I13 439 aa11.8□□□□□ -0.52
LINC00342-202ENST00000448494 EFR3BQ9Y2G0 817 aa11.8□□□□□ -0.52
LINC00342-202ENST00000448494 NFE2L3Q9Y4A8 694 aa11.8□□□□□ -0.52
LINC00342-202ENST00000448494 STK24Q9Y6E0 443 aa11.8□□□□□ -0.52
LINC00342-202ENST00000448494 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.79□□□□□ -0.52
LINC00342-202ENST00000448494 HTR3EA5X5Y0 456 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 GCOM1H8Y6P7 765 aaPredicted RBP11.79□□□□□ -0.52
LINC00342-202ENST00000448494 IGF2BP3O00425 579 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC00342-202ENST00000448494 ALDH1L1O75891 902 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 MYZAPP0CAP1 466 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 CNPY1Q3B7I2 92 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 AGBL2Q5U5Z8 902 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 PIGWQ7Z7B1 504 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 IFT20Q8IY31 132 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC00342-202ENST00000448494 TRIM11Q96F44 468 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 CATSPER2Q96P56 530 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 RAB17Q9H0T7 212 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 CNOT10Q9H9A5 744 aaKnown RBP11.79□□□□□ -0.52
LINC00342-202ENST00000448494 RNPEPL1Q9HAU8 725 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 GUCA1BQ9UMX6 200 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 SPTLC2O15270 562 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 HNRNPRO43390 633 aaKnown RBP11.79□□□□□ -0.52
LINC00342-202ENST00000448494 RARAP10276 462 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 FLT3P36888 993 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 CCT6AP40227 531 aaKnown RBP11.79□□□□□ -0.52
LINC00342-202ENST00000448494 ERVK-24P63145 666 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 TMEM53Q6P2H8 277 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 DNAJC9Q8WXX5 260 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 LENG1Q96BZ8 264 aaPredicted RBP11.79□□□□□ -0.52
LINC00342-202ENST00000448494 MAML3Q96JK9 1138 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 SNX27Q96L92 541 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 HMG20BQ9P0W2 317 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 SUCLA2Q9P2R7 463 aaPredicted RBP11.79□□□□□ -0.52
LINC00342-202ENST00000448494 AGAP1Q9UPQ3 857 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 LRCH1Q9Y2L9 728 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 CTDP1Q9Y5B0 961 aaPredicted RBP11.79□□□□□ -0.52
LINC00342-202ENST00000448494 USP42Q9H9J4 1324 aaKnown RBP11.79□□□□□ -0.52
LINC00342-202ENST00000448494 ARHGAP5Q13017 1502 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 LTBP4Q8N2S1 1624 aa11.79□□□□□ -0.52
LINC00342-202ENST00000448494 PHF20L1A8MW92 1017 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 LSM1O15116 133 aaKnown RBP11.78□□□□□ -0.52
LINC00342-202ENST00000448494 CETN3O15182 167 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 RGL2O15211 777 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 TPPPO94811 219 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 ASLP04424 464 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 GPSM2P81274 684 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 CFAP157Q5JU67 520 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
LINC00342-202ENST00000448494 ANKRD24Q8TF21 1146 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 SPATA16Q9BXB7 569 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms