RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 FAM198AQ9UFP1 575 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 STX10O60499 249 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 STAT3P40763 770 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 GRB10Q13322 594 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 CCDC93Q567U6 631 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 KCND1Q9NSA2 647 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 IGKV6D-41A0A0C4DH26 115 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 MYMKA6NI61 221 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 ECE2O60344 883 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 KIAA0895Q8NCT3 520 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 PNMA5Q96PV4 448 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 DUSP9Q99956 384 aaKnown RBP16.62■□□□□ 0.25
SF1-211ENST00000448404 FGFBP2Q9BYJ0 223 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 BLOC1S4Q9NUP1 217 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 LRWD1Q9UFC0 647 aa16.62■□□□□ 0.25
SF1-211ENST00000448404 CLRN2A0PK11 232 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 KRT9P35527 623 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 FILIP1LQ4L180 1135 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 CCDC84Q86UT8 332 aaPredicted RBP16.61■□□□□ 0.25
SF1-211ENST00000448404 L2HGDHQ9H9P8 463 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 ADGRG1Q9Y653 693 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 NPHP3-ACAD11A0A0J9YXS1 232 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 TTC26A0AVF1 554 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 ARHGAP29Q52LW3 1261 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 SIAH1Q8IUQ4 282 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 MASTLQ96GX5 879 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 CCSER1Q9C0I3 900 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 BCAS3Q9H6U6 928 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 AGPAT5Q9NUQ2 364 aa16.61■□□□□ 0.25
SF1-211ENST00000448404 CSGALNACT2Q8N6G5 542 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 CCDC155Q8N6L0 562 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 CCDC12Q8WUD4 166 aaPredicted RBP16.6■□□□□ 0.25
SF1-211ENST00000448404 LZTS2Q9BRK4 669 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 ZNF446Q9NWS9 450 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 MYH8P13535 1937 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 C21orf2O43822 256 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 IKQ13123 557 aaPredicted RBP16.6■□□□□ 0.25
SF1-211ENST00000448404 TTI2Q6NXR4 508 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 ERO1AQ96HE7 468 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 MORC2Q9Y6X9 1032 aaPredicted RBP16.6■□□□□ 0.25
SF1-211ENST00000448404 ZSCAN12O43309 604 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 QRICH1Q2TAL8 776 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 TMED8Q6PL24 325 aaPredicted RBP16.6■□□□□ 0.25
SF1-211ENST00000448404 SNX29Q8TEQ0 813 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 PRMT6Q96LA8 375 aaPredicted RBP16.6■□□□□ 0.25
SF1-211ENST00000448404 MTMR9Q96QG7 549 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 EXOC1Q9NV70 894 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 LIMA1Q9UHB6 759 aaKnown RBP16.6■□□□□ 0.25
SF1-211ENST00000448404 SCN9AQ15858 1988 aa16.6■□□□□ 0.25
SF1-211ENST00000448404 SEC31AO94979 1220 aaKnown RBP16.59■□□□□ 0.25
SF1-211ENST00000448404 SNHG28P0DPA3 235 aa16.59■□□□□ 0.25
SF1-211ENST00000448404 HOXA13P31271 388 aaPredicted RBP16.59■□□□□ 0.25
SF1-211ENST00000448404 SLC1A4P43007 532 aa16.59■□□□□ 0.25
SF1-211ENST00000448404 GIMAP8Q8ND71 665 aaPredicted RBP16.59■□□□□ 0.25
SF1-211ENST00000448404 HAS1Q92839 578 aa16.59■□□□□ 0.25
SF1-211ENST00000448404 ABHD10Q9NUJ1 306 aa16.59■□□□□ 0.25
SF1-211ENST00000448404 CGNQ9P2M7 1197 aaKnown RBP16.59■□□□□ 0.25
SF1-211ENST00000448404 PUF60Q9UHX1 559 aaKnown RBP16.59■□□□□ 0.25
SF1-211ENST00000448404 ZBTB12Q9Y330 459 aaPredicted RBP16.59■□□□□ 0.25
SF1-211ENST00000448404 SMCHD1A6NHR9 2005 aa16.59■□□□□ 0.25
SF1-211ENST00000448404 MARCH6O60337 910 aa16.59■□□□□ 0.25
SF1-211ENST00000448404 ALDH1B1P30837 517 aa16.59■□□□□ 0.25
SF1-211ENST00000448404 CASQ1P31415 396 aa16.59■□□□□ 0.25
SF1-211ENST00000448404 NOVP48745 357 aa16.59■□□□□ 0.25
SF1-211ENST00000448404 ZYXQ15942 572 aaKnown RBP16.59■□□□□ 0.25
SF1-211ENST00000448404 CERKLQ49MI3 558 aaPredicted RBP16.59■□□□□ 0.25
SF1-211ENST00000448404 KIFC2Q96AC6 838 aa16.59■□□□□ 0.25
SF1-211ENST00000448404 SEMA6BQ9H3T3 888 aa16.59■□□□□ 0.25
SF1-211ENST00000448404 TCP10L2B9ZVM9 353 aa16.58■□□□□ 0.25
SF1-211ENST00000448404 MYO1BO43795 1136 aa16.58■□□□□ 0.25
SF1-211ENST00000448404 RHOBTB3O94955 611 aa16.58■□□□□ 0.25
SF1-211ENST00000448404 HLA-DOAP06340 250 aa16.58■□□□□ 0.25
SF1-211ENST00000448404 PDE6BP35913 854 aa16.58■□□□□ 0.25
SF1-211ENST00000448404 ZNF569Q5MCW4 686 aa16.58■□□□□ 0.25
SF1-211ENST00000448404 DACT2Q5SW24 774 aa16.58■□□□□ 0.25
SF1-211ENST00000448404 GALNT17Q6IS24 598 aa16.58■□□□□ 0.25
SF1-211ENST00000448404 ZNF771Q7L3S4 317 aaPredicted RBP16.58■□□□□ 0.25
SF1-211ENST00000448404 TMX4Q9H1E5 349 aaPredicted RBP16.58■□□□□ 0.25
SF1-211ENST00000448404 PSTPIP2Q9H939 334 aa16.58■□□□□ 0.25
SF1-211ENST00000448404 RMND1Q9NWS8 449 aa16.58■□□□□ 0.25
SF1-211ENST00000448404 PNMA6FA0A0J9YX94 578 aa16.58■□□□□ 0.24
SF1-211ENST00000448404 E9PMD0 336 aa16.58■□□□□ 0.24
SF1-211ENST00000448404 ZBTB22O15209 634 aa16.58■□□□□ 0.24
SF1-211ENST00000448404 RAD17O75943 681 aa16.58■□□□□ 0.24
SF1-211ENST00000448404 KCNJ6P48051 423 aa16.58■□□□□ 0.24
SF1-211ENST00000448404 APBA1Q02410 837 aa16.58■□□□□ 0.24
SF1-211ENST00000448404 EN1Q05925 392 aaPredicted RBP16.58■□□□□ 0.24
SF1-211ENST00000448404 ASPRV1Q53RT3 343 aa16.58■□□□□ 0.24
SF1-211ENST00000448404 TEX35Q5T0J7 233 aa16.58■□□□□ 0.24
SF1-211ENST00000448404 PCMTD1Q96MG8 357 aaPredicted RBP16.58■□□□□ 0.24
SF1-211ENST00000448404 PCDHA1Q9Y5I3 950 aa16.58■□□□□ 0.24
SF1-211ENST00000448404 FAM170AA1A519 330 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 RASSF10A6NK89 507 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 YDJCA8MPS7 323 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 MEIS1O00470 390 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 PSMA7O14818 248 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 EPHB6O15197 1021 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 CCDC175P0C221 793 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 ECE1P42892 770 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 MNS1Q8NEH6 495 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms