RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SYDE2Q5VT97 1194 aa19.67■□□□□ 0.74
SMC6-206ENST00000446852 CCDC150Q8NCX0 1101 aa19.67■□□□□ 0.74
SMC6-206ENST00000446852 ACER1Q8TDN7 264 aa19.67■□□□□ 0.74
SMC6-206ENST00000446852 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.67■□□□□ 0.74
SMC6-206ENST00000446852 ZBTB21Q9ULJ3 1066 aa19.67■□□□□ 0.74
SMC6-206ENST00000446852 NFKBIEO00221 500 aa19.66■□□□□ 0.74
SMC6-206ENST00000446852 COBLO75128 1261 aa19.66■□□□□ 0.74
SMC6-206ENST00000446852 IKQ13123 557 aaPredicted RBP19.66■□□□□ 0.74
SMC6-206ENST00000446852 CDKAL1Q5VV42 579 aa19.66■□□□□ 0.74
SMC6-206ENST00000446852 APTXQ7Z2E3 356 aaKnown RBP19.66■□□□□ 0.74
SMC6-206ENST00000446852 CUEDC2Q9H467 287 aa19.66■□□□□ 0.74
SMC6-206ENST00000446852 WNT10BO00744 389 aa19.66■□□□□ 0.74
SMC6-206ENST00000446852 TAL1P17542 331 aaPredicted RBP19.66■□□□□ 0.74
SMC6-206ENST00000446852 MTFR1LQ9H019 292 aa19.66■□□□□ 0.74
SMC6-206ENST00000446852 LRWD1Q9UFC0 647 aa19.66■□□□□ 0.74
SMC6-206ENST00000446852 PGAP2Q9UHJ9 254 aa19.66■□□□□ 0.74
SMC6-206ENST00000446852 SYNPO2Q9UMS6 1093 aa19.66■□□□□ 0.74
SMC6-206ENST00000446852 POTEMA6NI47 508 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 MEIS2O14770 477 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 MYL1P05976 194 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 SFPQP23246 707 aaKnown RBP eCLIP19.65■□□□□ 0.74
SMC6-206ENST00000446852 CIAPIN1Q6FI81 312 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 BTNL9Q6UXG8 535 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 MIGA2Q7L4E1 593 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 FAM83AQ86UY5 434 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 P2RX7Q99572 595 aaKnown RBP19.65■□□□□ 0.74
SMC6-206ENST00000446852 AMNQ9BXJ7 453 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 DDX25Q9UHL0 483 aaKnown RBP19.65■□□□□ 0.74
SMC6-206ENST00000446852 POLD1P28340 1107 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 USH1GQ495M9 461 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 KMT5BQ4FZB7 885 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 HAS1Q92839 578 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 GLT8D2Q9H1C3 349 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 MAGEF1Q9HAY2 307 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 ARHGEF10LQ9HCE6 1279 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 PPP1R1BQ9UD71 204 aaPredicted RBP19.65■□□□□ 0.74
SMC6-206ENST00000446852 TMX2Q9Y320 296 aa19.65■□□□□ 0.74
SMC6-206ENST00000446852 PRCPP42785 496 aa19.64■□□□□ 0.74
SMC6-206ENST00000446852 GRB10Q13322 594 aa19.64■□□□□ 0.74
SMC6-206ENST00000446852 KCNB1Q14721 858 aa19.64■□□□□ 0.74
SMC6-206ENST00000446852 FBXO11Q86XK2 927 aa19.64■□□□□ 0.74
SMC6-206ENST00000446852 GJA10Q969M2 543 aa19.64■□□□□ 0.74
SMC6-206ENST00000446852 MYOZ2Q9NPC6 264 aa19.64■□□□□ 0.74
SMC6-206ENST00000446852 RWDD2AQ9UIY3 292 aa19.64■□□□□ 0.74
SMC6-206ENST00000446852 MAPK8IP1Q9UQF2 711 aa19.64■□□□□ 0.74
SMC6-206ENST00000446852 USP27XA6NNY8 438 aa19.64■□□□□ 0.73
SMC6-206ENST00000446852 TMEM266Q2M3C6 531 aa19.64■□□□□ 0.73
SMC6-206ENST00000446852 JDP2Q8WYK2 163 aa19.64■□□□□ 0.73
SMC6-206ENST00000446852 ANO3Q9BYT9 981 aa19.64■□□□□ 0.73
SMC6-206ENST00000446852 PRR12Q9ULL5 1215 aa19.64■□□□□ 0.73
SMC6-206ENST00000446852 SCAF8Q9UPN6 1271 aaKnown RBP19.64■□□□□ 0.73
SMC6-206ENST00000446852 A0A1B0GTH6 734 aa19.63■□□□□ 0.73
SMC6-206ENST00000446852 TBC1D12O60347 775 aa19.63■□□□□ 0.73
SMC6-206ENST00000446852 PAK1Q13153 545 aa19.63■□□□□ 0.73
SMC6-206ENST00000446852 CALML4Q96GE6 196 aa19.63■□□□□ 0.73
SMC6-206ENST00000446852 PNMA5Q96PV4 448 aa19.63■□□□□ 0.73
SMC6-206ENST00000446852 TRIM9Q9C026 710 aa19.63■□□□□ 0.73
SMC6-206ENST00000446852 RHOBTB3O94955 611 aa19.63■□□□□ 0.73
SMC6-206ENST00000446852 GCFC2P16383 781 aaKnown RBP19.63■□□□□ 0.73
SMC6-206ENST00000446852 TERF1P54274 439 aa19.63■□□□□ 0.73
SMC6-206ENST00000446852 PDIA5Q14554 519 aa19.63■□□□□ 0.73
SMC6-206ENST00000446852 NR1I3Q14994 352 aa19.63■□□□□ 0.73
SMC6-206ENST00000446852 NELFBQ8WX92 580 aa19.63■□□□□ 0.73
SMC6-206ENST00000446852 NUDT12Q9BQG2 462 aa19.63■□□□□ 0.73
SMC6-206ENST00000446852 OPLAHO14841 1288 aa19.62■□□□□ 0.73
SMC6-206ENST00000446852 EGFRP00533 1210 aa19.62■□□□□ 0.73
SMC6-206ENST00000446852 GOLGA8FQ08AF8 430 aa19.62■□□□□ 0.73
SMC6-206ENST00000446852 GOLGA8DPQ0D2H9 430 aa19.62■□□□□ 0.73
SMC6-206ENST00000446852 ADSSL1Q8N142 457 aa19.62■□□□□ 0.73
SMC6-206ENST00000446852 BLOC1S4Q9NUP1 217 aa19.62■□□□□ 0.73
SMC6-206ENST00000446852 STAT2P52630 851 aa19.62■□□□□ 0.73
SMC6-206ENST00000446852 TBX2Q13207 712 aaPredicted RBP19.62■□□□□ 0.73
SMC6-206ENST00000446852 FAM83BQ5T0W9 1011 aa19.62■□□□□ 0.73
SMC6-206ENST00000446852 CRYGNQ8WXF5 182 aa19.62■□□□□ 0.73
SMC6-206ENST00000446852 C16orf45Q96MC5 204 aaPredicted RBP19.62■□□□□ 0.73
SMC6-206ENST00000446852 GIMAP8Q8ND71 665 aaPredicted RBP19.61■□□□□ 0.73
SMC6-206ENST00000446852 C7orf25Q9BPX7 421 aa19.61■□□□□ 0.73
SMC6-206ENST00000446852 RAB34Q9BZG1 259 aa19.61■□□□□ 0.73
SMC6-206ENST00000446852 CAP2P40123 477 aa19.61■□□□□ 0.73
SMC6-206ENST00000446852 AP3B2Q13367 1082 aa19.61■□□□□ 0.73
SMC6-206ENST00000446852 DHX8Q14562 1220 aaKnown RBP19.61■□□□□ 0.73
SMC6-206ENST00000446852 CCDC125Q86Z20 511 aa19.61■□□□□ 0.73
SMC6-206ENST00000446852 GOPCQ9HD26 462 aa19.61■□□□□ 0.73
SMC6-206ENST00000446852 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.61■□□□□ 0.73
SMC6-206ENST00000446852 ADD3Q9UEY8 706 aaKnown RBP19.61■□□□□ 0.73
SMC6-206ENST00000446852 TEX33O43247 280 aa19.6■□□□□ 0.73
SMC6-206ENST00000446852 MMP14P50281 582 aa19.6■□□□□ 0.73
SMC6-206ENST00000446852 USP11P51784 963 aa19.6■□□□□ 0.73
SMC6-206ENST00000446852 SPECC1LQ69YQ0 1117 aa19.6■□□□□ 0.73
SMC6-206ENST00000446852 SNX29Q8TEQ0 813 aa19.6■□□□□ 0.73
SMC6-206ENST00000446852 UIMC1Q96RL1 719 aa19.6■□□□□ 0.73
SMC6-206ENST00000446852 GLIS2Q9BZE0 524 aaPredicted RBP19.6■□□□□ 0.73
SMC6-206ENST00000446852 TRIM49BA6NDI0 452 aa19.6■□□□□ 0.73
SMC6-206ENST00000446852 MAP3K10Q02779 954 aa19.6■□□□□ 0.73
SMC6-206ENST00000446852 TPD52L1Q16890 204 aaPredicted RBP19.6■□□□□ 0.73
SMC6-206ENST00000446852 CCDC84Q86UT8 332 aaPredicted RBP19.6■□□□□ 0.73
SMC6-206ENST00000446852 MBOAT7Q96N66 472 aa19.6■□□□□ 0.73
SMC6-206ENST00000446852 STK17AQ9UEE5 414 aa19.6■□□□□ 0.73
SMC6-206ENST00000446852 CYP3A7-CYP3A51PA0A087WV96 503 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 CYP3A7P24462 503 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms