RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SEMA3FQ13275 785 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 TEKT1Q969V4 418 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 UIMC1Q96RL1 719 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 CTTNBP2NLQ9P2B4 639 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 FAM184BQ9ULE4 1060 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 UBAP1LF5GYI3 381 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 RASSF7Q02833 373 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 RAB17Q9H0T7 212 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 RABEP2Q9H5N1 569 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 MRFAP1Q9Y605 127 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 BZW2Q9Y6E2 419 aaKnown RBP18.34■□□□□ 0.53
TCOF1-206ENST00000445265 EPHB4P54760 987 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 AGXT2Q9BYV1 514 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 A0A0G2JLW4 131 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 RNF40O75150 1001 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 ATP2C1P98194 919 aaPredicted RBP18.34■□□□□ 0.53
TCOF1-206ENST00000445265 USH1GQ495M9 461 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 TRIM31Q9BZY9 425 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.34■□□□□ 0.53
TCOF1-206ENST00000445265 H2AFZP0C0S5 128 aa18.33■□□□□ 0.53
TCOF1-206ENST00000445265 PSMD2Q13200 908 aa18.33■□□□□ 0.53
TCOF1-206ENST00000445265 H2AFVQ71UI9 128 aa18.33■□□□□ 0.53
TCOF1-206ENST00000445265 EEF2P13639 858 aaKnown RBP18.33■□□□□ 0.53
TCOF1-206ENST00000445265 GUCY2FP51841 1108 aa18.33■□□□□ 0.53
TCOF1-206ENST00000445265 GSTA5Q7RTV2 222 aa18.33■□□□□ 0.53
TCOF1-206ENST00000445265 CCDC50Q8IVM0 306 aa18.33■□□□□ 0.53
TCOF1-206ENST00000445265 ELOA2Q8IYF1 753 aaPredicted RBP18.33■□□□□ 0.53
TCOF1-206ENST00000445265 BCAS4Q8TDM0 211 aa18.33■□□□□ 0.53
TCOF1-206ENST00000445265 ATP5DP30049 168 aa18.33■□□□□ 0.52
TCOF1-206ENST00000445265 DYNLL2Q96FJ2 89 aa18.33■□□□□ 0.52
TCOF1-206ENST00000445265 NDST4Q9H3R1 872 aa18.33■□□□□ 0.52
TCOF1-206ENST00000445265 VEZTQ9HBM0 779 aa18.33■□□□□ 0.52
TCOF1-206ENST00000445265 A0A1B0GTH6 734 aa18.33■□□□□ 0.52
TCOF1-206ENST00000445265 PPFIA4O75335 1185 aa18.33■□□□□ 0.52
TCOF1-206ENST00000445265 LRRC63Q05C16 580 aa18.33■□□□□ 0.52
TCOF1-206ENST00000445265 SEPT2Q15019 361 aa18.33■□□□□ 0.52
TCOF1-206ENST00000445265 GPATCH11Q8N954 259 aa18.33■□□□□ 0.52
TCOF1-206ENST00000445265 U2AF1L4Q8WU68 220 aaKnown RBP18.33■□□□□ 0.52
TCOF1-206ENST00000445265 PIGSQ96S52 555 aa18.33■□□□□ 0.52
TCOF1-206ENST00000445265 ZBTB21Q9ULJ3 1066 aa18.33■□□□□ 0.52
TCOF1-206ENST00000445265 IKBKGQ9Y6K9 419 aa18.33■□□□□ 0.52
TCOF1-206ENST00000445265 MROH7-TTC4A0A0A0MT08 1334 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 NF2P35240 595 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 PRR16Q569H4 304 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 DNAI2Q9GZS0 605 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 COL4A3BPQ9Y5P4 624 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 PRCPP42785 496 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 SMTNP53814 917 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 KRT71Q3SY84 523 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 DCP1AQ9NPI6 582 aaPredicted RBP18.32■□□□□ 0.52
TCOF1-206ENST00000445265 KIAA1024Q9UPX6 916 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 CABS1Q96KC9 395 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 CYP27A1Q02318 531 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 CEP85LQ5SZL2 805 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 SPATS2Q86XZ4 545 aaKnown RBP18.32■□□□□ 0.52
TCOF1-206ENST00000445265 IPO4Q8TEX9 1081 aaKnown RBP18.32■□□□□ 0.52
TCOF1-206ENST00000445265 CCDC17Q96LX7 622 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 WDR24Q96S15 920 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 MINPP1Q9UNW1 487 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 EXOC7Q9UPT5 735 aa18.32■□□□□ 0.52
TCOF1-206ENST00000445265 USP17L3A6NCW0 530 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 USP17L4A6NCW7 530 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 KRIT1O00522 736 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 EIF4A3P38919 411 aaKnown RBP18.31■□□□□ 0.52
TCOF1-206ENST00000445265 USP17L1Q7RTZ2 530 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 ORC4O43929 436 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 CTNNA1P35221 906 aaKnown RBP18.31■□□□□ 0.52
TCOF1-206ENST00000445265 GUCY2DQ02846 1103 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 EHHADHQ08426 723 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 TCP10Q12799 353 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 ZNF710Q8N1W2 664 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 PCDHA1Q9Y5I3 950 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 ANO9A1A5B4 782 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 CFBP00751 764 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 FOSP01100 380 aaPredicted RBP18.31■□□□□ 0.52
TCOF1-206ENST00000445265 EXOC3L4Q17RC7 722 aa18.31■□□□□ 0.52
TCOF1-206ENST00000445265 USP17L2Q6R6M4 530 aa18.3■□□□□ 0.52
TCOF1-206ENST00000445265 PAIP2Q9BPZ3 127 aaKnown RBP18.3■□□□□ 0.52
TCOF1-206ENST00000445265 ADAM21Q9UKJ8 722 aa18.3■□□□□ 0.52
TCOF1-206ENST00000445265 KIF11P52732 1056 aa18.3■□□□□ 0.52
TCOF1-206ENST00000445265 FMR1Q06787 632 aaKnown RBP eCLIP18.3■□□□□ 0.521e-6■■■■□ 20.4
TCOF1-206ENST00000445265 PLCB1Q9NQ66 1216 aa18.3■□□□□ 0.52
TCOF1-206ENST00000445265 ZMYND10O75800 440 aa18.3■□□□□ 0.52
TCOF1-206ENST00000445265 TTLL1O95922 423 aa18.3■□□□□ 0.52
TCOF1-206ENST00000445265 GJC1P36383 396 aa18.3■□□□□ 0.52
TCOF1-206ENST00000445265 TPH2Q8IWU9 490 aa18.3■□□□□ 0.52
TCOF1-206ENST00000445265 KCNK9Q9NPC2 374 aa18.3■□□□□ 0.52
TCOF1-206ENST00000445265 VIMP08670 466 aaKnown RBP18.3■□□□□ 0.52
TCOF1-206ENST00000445265 CEP57Q86XR8 500 aa18.3■□□□□ 0.52
TCOF1-206ENST00000445265 PLEKHA4Q9H4M7 779 aa18.3■□□□□ 0.52
TCOF1-206ENST00000445265 PCDHA13Q9Y5I0 950 aa18.3■□□□□ 0.52
TCOF1-206ENST00000445265 PKD2L1Q9P0L9 805 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 E7EVH7 732 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 PRDX5P30044 214 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 LRRC41Q15345 812 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 DIXDC1Q155Q3 683 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 FBXL16Q8N461 479 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 GAS7O60861 476 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 CYP2D6P10635 497 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 NR2F2P24468 414 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms