RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 TOX2Q96NM4 488 aa20.28■□□□□ 0.84
PDCD4-203ENST00000444997 PDGFCQ9NRA1 345 aa20.28■□□□□ 0.84
PDCD4-203ENST00000444997 GNEQ9Y223 722 aaKnown RBP20.28■□□□□ 0.84
PDCD4-203ENST00000444997 MRPL11Q9Y3B7 192 aaKnown RBP20.28■□□□□ 0.84
PDCD4-203ENST00000444997 Q9Y3F1 56 aa20.28■□□□□ 0.84
PDCD4-203ENST00000444997 RBM8AQ9Y5S9 174 aaKnown RBP20.28■□□□□ 0.84
PDCD4-203ENST00000444997 DDX49Q9Y6V7 483 aaKnown RBP20.28■□□□□ 0.84
PDCD4-203ENST00000444997 MROH7Q68CQ1 1323 aa20.27■□□□□ 0.84
PDCD4-203ENST00000444997 SMPD1P17405 629 aa20.27■□□□□ 0.84
PDCD4-203ENST00000444997 IRX5P78411 483 aaPredicted RBP20.27■□□□□ 0.84
PDCD4-203ENST00000444997 QRICH1Q2TAL8 776 aa20.27■□□□□ 0.84
PDCD4-203ENST00000444997 LRIT3Q3SXY7 679 aa20.27■□□□□ 0.84
PDCD4-203ENST00000444997 ANKRD33Q7Z3H0 272 aa20.27■□□□□ 0.84
PDCD4-203ENST00000444997 JMJD4Q9H9V9 463 aa20.27■□□□□ 0.84
PDCD4-203ENST00000444997 TMEM39AQ9NV64 488 aa20.27■□□□□ 0.84
PDCD4-203ENST00000444997 A0A0U1RQG5 324 aaPredicted RBP20.26■□□□□ 0.83
PDCD4-203ENST00000444997 TRIM43BA6NCK2 446 aa20.26■□□□□ 0.83
PDCD4-203ENST00000444997 CABYRO75952 493 aa20.26■□□□□ 0.83
PDCD4-203ENST00000444997 BEX3Q00994 111 aa20.26■□□□□ 0.83
PDCD4-203ENST00000444997 FSCN1Q16658 493 aaKnown RBP20.26■□□□□ 0.83
PDCD4-203ENST00000444997 TMEM67Q5HYA8 995 aa20.26■□□□□ 0.83
PDCD4-203ENST00000444997 SH3RF1Q7Z6J0 888 aa20.26■□□□□ 0.83
PDCD4-203ENST00000444997 CATIPQ7Z7H3 387 aa20.26■□□□□ 0.83
PDCD4-203ENST00000444997 STAG2Q8N3U4 1231 aa20.26■□□□□ 0.83
PDCD4-203ENST00000444997 BADQ92934 168 aa20.26■□□□□ 0.83
PDCD4-203ENST00000444997 TRIM43Q96BQ3 446 aaPredicted RBP20.26■□□□□ 0.83
PDCD4-203ENST00000444997 WDR11Q9BZH6 1224 aa20.26■□□□□ 0.83
PDCD4-203ENST00000444997 SOX1O00570 391 aaPredicted RBP20.25■□□□□ 0.83
PDCD4-203ENST00000444997 RAG1P15918 1043 aa20.25■□□□□ 0.83
PDCD4-203ENST00000444997 TRAF1Q13077 416 aa20.25■□□□□ 0.83
PDCD4-203ENST00000444997 DUSP28Q4G0W2 176 aa20.25■□□□□ 0.83
PDCD4-203ENST00000444997 BMP2KLQ5H9B9 411 aa20.25■□□□□ 0.83
PDCD4-203ENST00000444997 CASC1Q6TDU7 716 aa20.25■□□□□ 0.83
PDCD4-203ENST00000444997 LRCH3Q96II8 777 aa20.25■□□□□ 0.83
PDCD4-203ENST00000444997 ESYT1Q9BSJ8 1104 aa20.25■□□□□ 0.83
PDCD4-203ENST00000444997 AMNQ9BXJ7 453 aa20.25■□□□□ 0.83
PDCD4-203ENST00000444997 MAD2L2Q9UI95 211 aa20.25■□□□□ 0.83
PDCD4-203ENST00000444997 PALM3A6NDB9 673 aaPredicted RBP20.24■□□□□ 0.83
PDCD4-203ENST00000444997 ARVCFO00192 962 aa20.24■□□□□ 0.83
PDCD4-203ENST00000444997 KIAA0355O15063 1070 aa20.24■□□□□ 0.83
PDCD4-203ENST00000444997 CTAGE5O15320 804 aa20.24■□□□□ 0.83
PDCD4-203ENST00000444997 TLR3O15455 904 aaKnown RBP20.24■□□□□ 0.83
PDCD4-203ENST00000444997 GRM4Q14833 912 aa20.24■□□□□ 0.83
PDCD4-203ENST00000444997 STOX1Q6ZVD7 989 aa20.24■□□□□ 0.83
PDCD4-203ENST00000444997 CHST3Q7LGC8 479 aa20.24■□□□□ 0.83
PDCD4-203ENST00000444997 ANO2Q9NQ90 1003 aa20.24■□□□□ 0.83
PDCD4-203ENST00000444997 TAF6LQ9Y6J9 622 aa20.24■□□□□ 0.83
PDCD4-203ENST00000444997 ZBTB5O15062 677 aa20.23■□□□□ 0.83
PDCD4-203ENST00000444997 EDNRBP24530 442 aa20.23■□□□□ 0.83
PDCD4-203ENST00000444997 FAAP100Q0VG06 881 aa20.23■□□□□ 0.83
PDCD4-203ENST00000444997 BRDTQ58F21 947 aaPredicted RBP20.23■□□□□ 0.83
PDCD4-203ENST00000444997 GPR153Q6NV75 609 aa20.23■□□□□ 0.83
PDCD4-203ENST00000444997 CXCL17Q6UXB2 119 aa20.23■□□□□ 0.83
PDCD4-203ENST00000444997 NSUN6Q8TEA1 469 aaKnown RBP20.23■□□□□ 0.83
PDCD4-203ENST00000444997 LSG1Q9H089 658 aaKnown RBP20.23■□□□□ 0.83
PDCD4-203ENST00000444997 MCM3APO60318 1980 aa20.23■□□□□ 0.83
PDCD4-203ENST00000444997 RBM47A0AV96 593 aaKnown RBP20.22■□□□□ 0.83
PDCD4-203ENST00000444997 NKRFO15226 690 aaKnown RBP eCLIP20.22■□□□□ 0.83
PDCD4-203ENST00000444997 CPT1AP50416 773 aa20.22■□□□□ 0.83
PDCD4-203ENST00000444997 CDK7P50613 346 aa20.22■□□□□ 0.83
PDCD4-203ENST00000444997 PPP2R5BQ15173 497 aa20.22■□□□□ 0.83
PDCD4-203ENST00000444997 MB21D2Q8IYB1 491 aaPredicted RBP20.22■□□□□ 0.83
PDCD4-203ENST00000444997 SYTL5Q8TDW5 730 aaPredicted RBP20.22■□□□□ 0.83
PDCD4-203ENST00000444997 SCFD2Q8WU76 684 aa20.22■□□□□ 0.83
PDCD4-203ENST00000444997 TBC1D5Q92609 795 aa20.22■□□□□ 0.83
PDCD4-203ENST00000444997 MTA3Q9BTC8 594 aa20.22■□□□□ 0.83
PDCD4-203ENST00000444997 SEZ6LQ9BYH1 1024 aa20.22■□□□□ 0.83
PDCD4-203ENST00000444997 PCDHA1Q9Y5I3 950 aa20.22■□□□□ 0.83
PDCD4-203ENST00000444997 CFBP00751 764 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 MCM5P33992 734 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 ARHGEF16Q5VV41 709 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 HOMER1Q86YM7 354 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 TMTC2Q8N394 836 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 OR6J1Q8NGC5 347 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 IGDCC4Q8TDY8 1250 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 MTMR8Q96EF0 704 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 CCDC136Q96JN2 1154 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 TAAR1Q96RJ0 339 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 IWS1Q96ST2 819 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 RMDN3Q96TC7 470 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 GPHNQ9NQX3 736 aaPredicted RBP20.21■□□□□ 0.83
PDCD4-203ENST00000444997 POLR3EQ9NVU0 708 aa20.21■□□□□ 0.83
PDCD4-203ENST00000444997 SLC27A2O14975 620 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 PRC1O43663 620 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 TXNP10599 105 aaKnown RBP20.2■□□□□ 0.82
PDCD4-203ENST00000444997 KIF5BP33176 963 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 ANTXR2P58335 489 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 TROAPQ12815 778 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 ITGA7Q13683 1181 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 TTLL4Q14679 1199 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 STXBP2Q15833 593 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 TMEM63BQ5T3F8 832 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 RNF20Q5VTR2 975 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 NFXL1Q6ZNB6 911 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 SAMD3Q8N6K7 520 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 CTCFLQ8NI51 663 aaPredicted RBP20.2■□□□□ 0.82
PDCD4-203ENST00000444997 RIOX1Q9H6W3 641 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 SENP2Q9HC62 589 aa20.2■□□□□ 0.82
PDCD4-203ENST00000444997 MAP3K20Q9NYL2 800 aaKnown RBP20.2■□□□□ 0.82
PDCD4-203ENST00000444997 RANBP2P49792 3224 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms