RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 TLE2Q04725 743 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 BAATQ14032 418 aaPredicted RBP10.23□□□□□ -0.77
USP6NL-203ENST00000443016 KCNA10Q16322 511 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 USH1GQ495M9 461 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 IFIT1BQ5T764 474 aaKnown RBP10.23□□□□□ -0.77
USP6NL-203ENST00000443016 ENAHQ8N8S7 591 aaPredicted RBP10.23□□□□□ -0.77
USP6NL-203ENST00000443016 TSEN34Q9BSV6 310 aaKnown RBP10.23□□□□□ -0.77
USP6NL-203ENST00000443016 UBA5Q9GZZ9 404 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
USP6NL-203ENST00000443016 CHMLP26374 656 aa10.22□□□□□ -0.77
USP6NL-203ENST00000443016 RNF207Q6ZRF8 634 aa10.22□□□□□ -0.77
USP6NL-203ENST00000443016 LRCH3Q96II8 777 aa10.22□□□□□ -0.77
USP6NL-203ENST00000443016 PURBQ96QR8 312 aaKnown RBP10.22□□□□□ -0.77
USP6NL-203ENST00000443016 MPHOSPH6Q99547 160 aaKnown RBP10.22□□□□□ -0.77
USP6NL-203ENST00000443016 CPVLQ9H3G5 476 aa10.22□□□□□ -0.77
USP6NL-203ENST00000443016 DDX49Q9Y6V7 483 aaKnown RBP10.22□□□□□ -0.77
USP6NL-203ENST00000443016 PARP1P09874 1014 aaKnown RBP10.22□□□□□ -0.77
USP6NL-203ENST00000443016 SNX17Q15036 470 aa10.22□□□□□ -0.77
USP6NL-203ENST00000443016 C1orf53Q5VUE5 145 aa10.22□□□□□ -0.77
USP6NL-203ENST00000443016 RALYLQ86SE5 291 aaKnown RBP10.22□□□□□ -0.77
USP6NL-203ENST00000443016 ERICH2A1L162 156 aa10.21□□□□□ -0.77
USP6NL-203ENST00000443016 DCDC2CA8MYV0 355 aa10.21□□□□□ -0.77
USP6NL-203ENST00000443016 ADCY6O43306 1168 aa10.21□□□□□ -0.77
USP6NL-203ENST00000443016 ASGR1P07306 291 aa10.21□□□□□ -0.77
USP6NL-203ENST00000443016 CLTBP09497 229 aa10.21□□□□□ -0.77
USP6NL-203ENST00000443016 ASPRV1Q53RT3 343 aa10.21□□□□□ -0.77
USP6NL-203ENST00000443016 KIAA1211Q6ZU35 1233 aa10.21□□□□□ -0.77
USP6NL-203ENST00000443016 FBXO16Q8IX29 292 aaPredicted RBP10.21□□□□□ -0.77
USP6NL-203ENST00000443016 AP5M1Q9H0R1 490 aa10.21□□□□□ -0.77
USP6NL-203ENST00000443016 VAT1LQ9HCJ6 419 aa10.21□□□□□ -0.77
USP6NL-203ENST00000443016 CDH23Q9H251 3354 aa10.21□□□□□ -0.78
USP6NL-203ENST00000443016 WDR19Q8NEZ3 1342 aa10.21□□□□□ -0.78
USP6NL-203ENST00000443016 MCM3APO60318 1980 aa10.21□□□□□ -0.78
USP6NL-203ENST00000443016 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.21□□□□□ -0.78
USP6NL-203ENST00000443016 MYADML2A6NDP7 307 aa10.21□□□□□ -0.78
USP6NL-203ENST00000443016 SOX1O00570 391 aaPredicted RBP10.21□□□□□ -0.78
USP6NL-203ENST00000443016 CDC45O75419 566 aa10.21□□□□□ -0.78
USP6NL-203ENST00000443016 RAG1P15918 1043 aa10.21□□□□□ -0.78
USP6NL-203ENST00000443016 GJA9P57773 515 aa10.21□□□□□ -0.78
USP6NL-203ENST00000443016 RPS6P62753 249 aaKnown RBP10.21□□□□□ -0.78
USP6NL-203ENST00000443016 IRX5P78411 483 aaPredicted RBP10.21□□□□□ -0.78
USP6NL-203ENST00000443016 SART3Q15020 963 aaKnown RBP10.21□□□□□ -0.78
USP6NL-203ENST00000443016 CDC37Q16543 378 aaPredicted RBP10.21□□□□□ -0.78
USP6NL-203ENST00000443016 TLK2Q86UE8 772 aa10.21□□□□□ -0.78
USP6NL-203ENST00000443016 KLHDC9Q8NEP7 349 aa10.21□□□□□ -0.78
USP6NL-203ENST00000443016 KATNBL1Q9H079 304 aa10.21□□□□□ -0.78
USP6NL-203ENST00000443016 PDLIM7Q9NR12 457 aa10.21□□□□□ -0.78
USP6NL-203ENST00000443016 TMEM39AQ9NV64 488 aa10.21□□□□□ -0.78
USP6NL-203ENST00000443016 ASTN1O14525 1302 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 DYNC1LI2O43237 492 aaPredicted RBP10.2□□□□□ -0.78
USP6NL-203ENST00000443016 CYP21A2P08686 494 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 ALDH5A1P51649 535 aaPredicted RBP10.2□□□□□ -0.78
USP6NL-203ENST00000443016 BEX3Q00994 111 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 PTH1RQ03431 593 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 LRIT3Q3SXY7 679 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 SLC30A10Q6XR72 485 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 SH3RF1Q7Z6J0 888 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 ADGRF4Q8IZF3 695 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 ANKS1AQ92625 1134 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 BADQ92934 168 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 VTA1Q9NP79 307 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 PDGFCQ9NRA1 345 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 ELP1O95163 1332 aa10.2□□□□□ -0.78
USP6NL-203ENST00000443016 B4DLN1 442 aa10.19□□□□□ -0.78
USP6NL-203ENST00000443016 IFIT3O14879 490 aaKnown RBP10.19□□□□□ -0.78
USP6NL-203ENST00000443016 SGSM2O43147 1006 aa10.19□□□□□ -0.78
USP6NL-203ENST00000443016 ZEB2O60315 1214 aa10.19□□□□□ -0.78
USP6NL-203ENST00000443016 CST5P28325 142 aaPredicted RBP10.19□□□□□ -0.78
USP6NL-203ENST00000443016 MRPL12P52815 198 aaKnown RBP10.19□□□□□ -0.78
USP6NL-203ENST00000443016 PDE4DQ08499 809 aa10.19□□□□□ -0.78
USP6NL-203ENST00000443016 IQSEC1Q6DN90 963 aa10.19□□□□□ -0.78
USP6NL-203ENST00000443016 CLEC4DQ8WXI8 215 aa10.19□□□□□ -0.78
USP6NL-203ENST00000443016 MROH7Q68CQ1 1323 aa10.19□□□□□ -0.78
USP6NL-203ENST00000443016 SMPD1P17405 629 aa10.19□□□□□ -0.78
USP6NL-203ENST00000443016 FSCN1Q16658 493 aaKnown RBP10.19□□□□□ -0.78
USP6NL-203ENST00000443016 CCSAPQ6IQ19 270 aaPredicted RBP10.19□□□□□ -0.78
USP6NL-203ENST00000443016 CYB5R4Q7L1T6 521 aa10.19□□□□□ -0.78
USP6NL-203ENST00000443016 NCOA7Q8NI08 942 aa10.19□□□□□ -0.78
USP6NL-203ENST00000443016 TRIM43BA6NCK2 446 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 CXCL17Q6UXB2 119 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 FBXO11Q86XK2 927 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 TRIM43Q96BQ3 446 aaPredicted RBP10.18□□□□□ -0.78
USP6NL-203ENST00000443016 TOX2Q96NM4 488 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 WDR11Q9BZH6 1224 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 UPF3AQ9H1J1 476 aaKnown RBP10.18□□□□□ -0.78
USP6NL-203ENST00000443016 GNEQ9Y223 722 aaKnown RBP10.18□□□□□ -0.78
USP6NL-203ENST00000443016 LOC102724159A0A0B4J2E5 919 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 A0A0U1RQG5 324 aaPredicted RBP10.18□□□□□ -0.78
USP6NL-203ENST00000443016 KLRF2D3W0D1 207 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 E7EWF7 191 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 PWP2Q15269 919 aaKnown RBP10.18□□□□□ -0.78
USP6NL-203ENST00000443016 QRICH1Q2TAL8 776 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 TAPT1Q6NXT6 567 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 CHST3Q7LGC8 479 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 ANKRD33Q7Z3H0 272 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 MCF2L2Q86YR7 1114 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 DNERQ8NFT8 737 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 LAMA4Q16363 1823 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 ABCB11O95342 1321 aa10.18□□□□□ -0.78
USP6NL-203ENST00000443016 A6NJR5 290 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms