RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 CFBP00751 764 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 HOXA13P31271 388 aaPredicted RBP24.1■■□□□ 1.45
VPS13B-204ENST00000441350 GRM1Q13255 1194 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 AP3B2Q13367 1082 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 Q3C1V9 767 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 RILPL1Q5EBL4 403 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 CHST13Q8NET6 341 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 GBP4Q96PP9 640 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 MOV10L1Q9BXT6 1211 aaKnown RBP24.1■■□□□ 1.45
VPS13B-204ENST00000441350 MAF1Q9H063 256 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 MAP3K20Q9NYL2 800 aaKnown RBP24.1■■□□□ 1.45
VPS13B-204ENST00000441350 FOSP01100 380 aaPredicted RBP24.1■■□□□ 1.45
VPS13B-204ENST00000441350 TRAPPC10P48553 1259 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 ERVK-9P63128 1117 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 ERVK-24P63145 666 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 NONOQ15233 471 aaKnown RBP eCLIP24.1■■□□□ 1.45
VPS13B-204ENST00000441350 USP28Q96RU2 1077 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 ACAD9Q9H845 621 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 TFIP11Q9UBB9 837 aaKnown RBP24.1■■□□□ 1.45
VPS13B-204ENST00000441350 MORF4L1Q9UBU8 362 aa24.1■■□□□ 1.45
VPS13B-204ENST00000441350 ADGRA2Q96PE1 1338 aa24.09■■□□□ 1.45
VPS13B-204ENST00000441350 KRT85P78386 507 aa24.09■■□□□ 1.45
VPS13B-204ENST00000441350 CNPY2Q9Y2B0 182 aa24.09■■□□□ 1.45
VPS13B-204ENST00000441350 SLC25A27O95847 323 aa24.08■■□□□ 1.45
VPS13B-204ENST00000441350 COPB2P35606 906 aa24.08■■□□□ 1.45
VPS13B-204ENST00000441350 INF2Q27J81 1249 aa24.08■■□□□ 1.45
VPS13B-204ENST00000441350 GPRC5AQ8NFJ5 357 aa24.08■■□□□ 1.45
VPS13B-204ENST00000441350 PGBD1Q96JS3 809 aa24.08■■□□□ 1.45
VPS13B-204ENST00000441350 CFAP45Q9UL16 551 aa24.08■■□□□ 1.45
VPS13B-204ENST00000441350 NOL7Q9UMY1 257 aaKnown RBP24.08■■□□□ 1.45
VPS13B-204ENST00000441350 AOC2O75106 756 aa24.07■■□□□ 1.44
VPS13B-204ENST00000441350 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.07■■□□□ 1.44
VPS13B-204ENST00000441350 ANKRD13CQ8N6S4 541 aa24.07■■□□□ 1.44
VPS13B-204ENST00000441350 ANO3Q9BYT9 981 aa24.07■■□□□ 1.44
VPS13B-204ENST00000441350 FTOQ9C0B1 505 aaKnown RBP eCLIP24.07■■□□□ 1.44
VPS13B-204ENST00000441350 POLR3EQ9NVU0 708 aa24.07■■□□□ 1.44
VPS13B-204ENST00000441350 RTEL1Q9NZ71 1219 aa24.07■■□□□ 1.44
VPS13B-204ENST00000441350 FBXO40Q9UH90 709 aa24.07■■□□□ 1.44
VPS13B-204ENST00000441350 SPDYE3A6NKU9 549 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 RPS6P62753 249 aaKnown RBP24.06■■□□□ 1.44
VPS13B-204ENST00000441350 TAF1CQ15572 869 aaPredicted RBP24.06■■□□□ 1.44
VPS13B-204ENST00000441350 RNF207Q6ZRF8 634 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 REM2Q8IYK8 340 aaPredicted RBP24.06■■□□□ 1.44
VPS13B-204ENST00000441350 SHCBP1Q8NEM2 672 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 TBCKQ8TEA7 893 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 CLIC4Q9Y696 253 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 WNT7AO00755 349 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 EDIL3O43854 480 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 NCLP19338 710 aaKnown RBP24.06■■□□□ 1.44
VPS13B-204ENST00000441350 ERCC3P19447 782 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 ANO1Q5XXA6 986 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 NSMFQ6X4W1 530 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 NCAPG2Q86XI2 1143 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 SYTL5Q8TDW5 730 aaPredicted RBP24.06■■□□□ 1.44
VPS13B-204ENST00000441350 CRYGNQ8WXF5 182 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 R3HDMLQ9H3Y0 253 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 A1CFQ9NQ94 594 aaKnown RBP24.06■■□□□ 1.44
VPS13B-204ENST00000441350 COL20A1Q9P218 1284 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 PCDHB6Q9Y5E3 794 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 MYH7BA7E2Y1 1941 aa24.06■■□□□ 1.44
VPS13B-204ENST00000441350 NASPP49321 788 aaPredicted RBP24.05■■□□□ 1.44
VPS13B-204ENST00000441350 BAATQ14032 418 aaPredicted RBP24.05■■□□□ 1.44
VPS13B-204ENST00000441350 NBR1Q14596 966 aa24.05■■□□□ 1.44
VPS13B-204ENST00000441350 FAM110CQ1W6H9 321 aa24.05■■□□□ 1.44
VPS13B-204ENST00000441350 SLC30A10Q6XR72 485 aa24.05■■□□□ 1.44
VPS13B-204ENST00000441350 NEK8Q86SG6 692 aa24.05■■□□□ 1.44
VPS13B-204ENST00000441350 FCHSD1Q86WN1 690 aa24.05■■□□□ 1.44
VPS13B-204ENST00000441350 SCAND2PQ9GZW5 306 aaPredicted RBP24.05■■□□□ 1.44
VPS13B-204ENST00000441350 MROH8Q9H579 483 aa24.05■■□□□ 1.44
VPS13B-204ENST00000441350 BCRP11274 1271 aa24.04■■□□□ 1.44
VPS13B-204ENST00000441350 ATP2B1P20020 1258 aa24.04■■□□□ 1.44
VPS13B-204ENST00000441350 SREBF1P36956 1147 aa24.04■■□□□ 1.44
VPS13B-204ENST00000441350 CCNA1P78396 465 aa24.04■■□□□ 1.44
VPS13B-204ENST00000441350 TTC38Q5R3I4 469 aa24.04■■□□□ 1.44
VPS13B-204ENST00000441350 CYP39A1Q9NYL5 469 aa24.04■■□□□ 1.44
VPS13B-204ENST00000441350 RCOR1Q9UKL0 485 aa24.04■■□□□ 1.44
VPS13B-204ENST00000441350 HTRA3P83110 453 aa24.03■■□□□ 1.44
VPS13B-204ENST00000441350 CEBPZQ03701 1054 aaKnown RBP24.03■■□□□ 1.44
VPS13B-204ENST00000441350 SF3A1Q15459 793 aaKnown RBP24.03■■□□□ 1.44
VPS13B-204ENST00000441350 LEO1Q8WVC0 666 aaPredicted RBP24.03■■□□□ 1.44
VPS13B-204ENST00000441350 PORCNQ9H237 461 aa24.03■■□□□ 1.44
VPS13B-204ENST00000441350 GDPD2Q9HCC8 539 aa24.03■■□□□ 1.44
VPS13B-204ENST00000441350 ZFYVE28Q9HCC9 887 aa24.03■■□□□ 1.44
VPS13B-204ENST00000441350 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.03■■□□□ 1.44
VPS13B-204ENST00000441350 FIBPO43427 364 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 TLR2O60603 784 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 YEATS4O95619 227 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 VEGFBP49765 207 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 PTPAQ15257 358 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 TMEM87AQ8NBN3 555 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 LINC00301Q8NCQ3 95 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 CA12O43570 354 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 ALDH1A1P00352 501 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 MCM4P33991 863 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 MAP2K2P36507 400 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 USP11P51784 963 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 ARHGAP4P98171 946 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 C17orf99Q6UX52 265 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 CPA4Q9UI42 421 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 PFASO15067 1338 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms