RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 FAM13BQ9NYF5 915 aa22.97■■□□□ 1.27
VRK2-207ENST00000440705 SYCE3A1L190 88 aa22.97■■□□□ 1.27
VRK2-207ENST00000440705 GCOM1H8Y6P7 765 aaPredicted RBP22.97■■□□□ 1.27
VRK2-207ENST00000440705 NEMFO60524 1076 aa22.97■■□□□ 1.27
VRK2-207ENST00000440705 POLR2MP0CAP2 368 aa22.97■■□□□ 1.27
VRK2-207ENST00000440705 USP11P51784 963 aa22.97■■□□□ 1.27
VRK2-207ENST00000440705 PPP4R3AQ6IN85 833 aa22.97■■□□□ 1.27
VRK2-207ENST00000440705 CPXCR1Q8N123 301 aa22.97■■□□□ 1.27
VRK2-207ENST00000440705 OPTNQ96CV9 577 aa22.97■■□□□ 1.27
VRK2-207ENST00000440705 ATG4CQ96DT6 458 aa22.97■■□□□ 1.27
VRK2-207ENST00000440705 SLC10A4Q96EP9 437 aa22.97■■□□□ 1.27
VRK2-207ENST00000440705 HPSEQ9Y251 543 aa22.97■■□□□ 1.27
VRK2-207ENST00000440705 CFBP00751 764 aa22.96■■□□□ 1.27
VRK2-207ENST00000440705 GCFC2P16383 781 aaKnown RBP22.96■■□□□ 1.27
VRK2-207ENST00000440705 TAL1P17542 331 aaPredicted RBP22.96■■□□□ 1.27
VRK2-207ENST00000440705 PRPHP41219 470 aa22.96■■□□□ 1.27
VRK2-207ENST00000440705 OAZ1P54368 228 aa22.96■■□□□ 1.27
VRK2-207ENST00000440705 MCF2L2Q86YR7 1114 aa22.96■■□□□ 1.27
VRK2-207ENST00000440705 CSRNP2Q9H175 543 aa22.96■■□□□ 1.27
VRK2-207ENST00000440705 TNMDQ9H2S6 317 aa22.96■■□□□ 1.27
VRK2-207ENST00000440705 RAVER2Q9HCJ3 691 aaKnown RBP22.96■■□□□ 1.27
VRK2-207ENST00000440705 RLFQ13129 1914 aa22.95■■□□□ 1.27
VRK2-207ENST00000440705 SYKP43405 635 aa22.95■■□□□ 1.26
VRK2-207ENST00000440705 GRIN1Q05586 938 aa22.95■■□□□ 1.26
VRK2-207ENST00000440705 SAMD3Q8N6K7 520 aa22.95■■□□□ 1.26
VRK2-207ENST00000440705 ZNF526Q8TF50 670 aaPredicted RBP22.95■■□□□ 1.26
VRK2-207ENST00000440705 MYH7BA7E2Y1 1941 aa22.94■■□□□ 1.26
VRK2-207ENST00000440705 VWA3AA6NCI4 1184 aa22.94■■□□□ 1.26
VRK2-207ENST00000440705 CTAGE5O15320 804 aa22.94■■□□□ 1.26
VRK2-207ENST00000440705 ZNF202O95125 648 aa22.94■■□□□ 1.26
VRK2-207ENST00000440705 HOXA7P31268 230 aaPredicted RBP22.94■■□□□ 1.26
VRK2-207ENST00000440705 HOXA13P31271 388 aaPredicted RBP22.94■■□□□ 1.26
VRK2-207ENST00000440705 DTHD1Q6ZMT9 781 aa22.94■■□□□ 1.26
VRK2-207ENST00000440705 GADL1Q6ZQY3 521 aa22.94■■□□□ 1.26
VRK2-207ENST00000440705 C2orf69Q8N8R5 385 aa22.94■■□□□ 1.26
VRK2-207ENST00000440705 GBA2Q9HCG7 927 aaPredicted RBP22.94■■□□□ 1.26
VRK2-207ENST00000440705 KCNH3Q9ULD8 1083 aa22.94■■□□□ 1.26
VRK2-207ENST00000440705 LOC285556D6RIA3 1793 aa22.94■■□□□ 1.26
VRK2-207ENST00000440705 ALAS1P13196 640 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 LONP1P36776 959 aaKnown RBP22.93■■□□□ 1.26
VRK2-207ENST00000440705 FMR1Q06787 632 aaKnown RBP eCLIP22.93■■□□□ 1.26
VRK2-207ENST00000440705 CAMK4Q16566 473 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 FASTKD5Q7L8L6 764 aaKnown RBP22.93■■□□□ 1.26
VRK2-207ENST00000440705 TMEM60Q9H2L4 133 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 MAP3K20Q9NYL2 800 aaKnown RBP22.93■■□□□ 1.26
VRK2-207ENST00000440705 ATP2A1O14983 1001 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 EDIL3O43854 480 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 OR52Z1P0C646 297 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 SREBF1P36956 1147 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 SPECC1Q5M775 1068 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 TREML2Q5T2D2 321 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 MOXD1Q6UVY6 613 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 LRSAM1Q6UWE0 723 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 REPS2Q8NFH8 660 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 TIGD1Q96MW7 591 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 EHMT1Q9H9B1 1298 aa22.93■■□□□ 1.26
VRK2-207ENST00000440705 ARHGAP4P98171 946 aa22.92■■□□□ 1.26
VRK2-207ENST00000440705 CRYGNQ8WXF5 182 aa22.92■■□□□ 1.26
VRK2-207ENST00000440705 CLEC4DQ8WXI8 215 aa22.92■■□□□ 1.26
VRK2-207ENST00000440705 TBC1D5Q92609 795 aa22.92■■□□□ 1.26
VRK2-207ENST00000440705 P2RX7Q99572 595 aaKnown RBP22.92■■□□□ 1.26
VRK2-207ENST00000440705 CYP3A7-CYP3A51PA0A087WV96 503 aa22.91■■□□□ 1.26
VRK2-207ENST00000440705 SPDYE16A6NNV3 312 aaPredicted RBP22.91■■□□□ 1.26
VRK2-207ENST00000440705 CELF2O95319 508 aaKnown RBP22.91■■□□□ 1.26
VRK2-207ENST00000440705 CYP3A7P24462 503 aa22.91■■□□□ 1.26
VRK2-207ENST00000440705 HSD17B4P51659 736 aa22.91■■□□□ 1.26
VRK2-207ENST00000440705 GHRHRQ02643 423 aa22.91■■□□□ 1.26
VRK2-207ENST00000440705 IL17AQ16552 155 aa22.91■■□□□ 1.26
VRK2-207ENST00000440705 CHADLQ6NUI6 762 aa22.91■■□□□ 1.26
VRK2-207ENST00000440705 FCHSD1Q86WN1 690 aa22.91■■□□□ 1.26
VRK2-207ENST00000440705 WNK4Q96J92 1243 aa22.91■■□□□ 1.26
VRK2-207ENST00000440705 SDF4Q9BRK5 362 aa22.91■■□□□ 1.26
VRK2-207ENST00000440705 DDX25Q9UHL0 483 aaKnown RBP22.91■■□□□ 1.26
VRK2-207ENST00000440705 AGTPBP1Q9UPW5 1226 aa22.91■■□□□ 1.26
VRK2-207ENST00000440705 TDP2O95551 362 aa22.9■■□□□ 1.26
VRK2-207ENST00000440705 COL11A1P12107 1806 aaPredicted RBP22.9■■□□□ 1.26
VRK2-207ENST00000440705 PABPC4Q13310 644 aaKnown RBP eCLIP22.9■■□□□ 1.26
VRK2-207ENST00000440705 SNAPC2Q13487 334 aa22.9■■□□□ 1.26
VRK2-207ENST00000440705 CALCRLQ16602 461 aa22.9■■□□□ 1.26
VRK2-207ENST00000440705 RBM43Q6ZSC3 357 aaKnown RBP22.9■■□□□ 1.26
VRK2-207ENST00000440705 MB21D1Q8N884 522 aa22.9■■□□□ 1.26
VRK2-207ENST00000440705 TRERF1Q96PN7 1200 aa22.9■■□□□ 1.26
VRK2-207ENST00000440705 MTMR9Q96QG7 549 aa22.9■■□□□ 1.26
VRK2-207ENST00000440705 TMEM132BQ14DG7 1078 aa22.9■■□□□ 1.26
VRK2-207ENST00000440705 TKFCQ3LXA3 575 aa22.9■■□□□ 1.26
VRK2-207ENST00000440705 POTEDQ86YR6 584 aa22.9■■□□□ 1.26
VRK2-207ENST00000440705 SYMPKQ92797 1274 aaKnown RBP22.9■■□□□ 1.26
VRK2-207ENST00000440705 TEX13BQ9BXU2 312 aa22.9■■□□□ 1.26
VRK2-207ENST00000440705 ZNF214Q9UL59 606 aaPredicted RBP22.9■■□□□ 1.26
VRK2-207ENST00000440705 NFIBO00712 420 aa22.89■■□□□ 1.25
VRK2-207ENST00000440705 SLC37A4O43826 429 aa22.89■■□□□ 1.25
VRK2-207ENST00000440705 CYP3A4P08684 503 aa22.89■■□□□ 1.25
VRK2-207ENST00000440705 IRX3P78415 501 aaPredicted RBP22.89■■□□□ 1.25
VRK2-207ENST00000440705 SNRNP48Q6IEG0 339 aaKnown RBP22.89■■□□□ 1.25
VRK2-207ENST00000440705 EPSTI1Q96J88 318 aa22.89■■□□□ 1.25
VRK2-207ENST00000440705 AK8Q96MA6 479 aa22.89■■□□□ 1.25
VRK2-207ENST00000440705 HOMER2Q9NSB8 354 aa22.89■■□□□ 1.25
VRK2-207ENST00000440705 GOLGA6L3A6NEY3 463 aa22.88■■□□□ 1.25
VRK2-207ENST00000440705 ITGBL1O95965 494 aaPredicted RBP22.88■■□□□ 1.25
VRK2-207ENST00000440705 MUM1L1Q5H9M0 696 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms