RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 TDP2O95551 362 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 CCDC175P0C221 793 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 EEF2P13639 858 aaKnown RBP11.7□□□□□ -0.54
CPNE1-218ENST00000439806 GCFC2P16383 781 aaKnown RBP11.7□□□□□ -0.54
CPNE1-218ENST00000439806 EEF1GP26641 437 aaKnown RBP11.7□□□□□ -0.54
CPNE1-218ENST00000439806 FXR2P51116 673 aaKnown RBP eCLIP11.7□□□□□ -0.542e-6■■■□□ 18.4
CPNE1-218ENST00000439806 CACNB3P54284 484 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 SLFN13Q68D06 897 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 CNNM4Q6P4Q7 775 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 SV2BQ7L1I2 683 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 FAM114A1Q8IWE2 563 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 ZFPM1Q8IX07 1006 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 GIMAP8Q8ND71 665 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-218ENST00000439806 MTMR8Q96EF0 704 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 MTMR9Q96QG7 549 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 TRIM9Q9C026 710 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 LRRC27Q9C0I9 530 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 KANSL2Q9H9L4 492 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 KCNQ5Q9NR82 932 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 STK32BQ9NY57 414 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 ZNF215Q9UL58 517 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-218ENST00000439806 DDTLA6NHG4 134 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-218ENST00000439806 FAM196BA6NMK8 535 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 PES1O00541 588 aaKnown RBP11.69□□□□□ -0.54
CPNE1-218ENST00000439806 SLC37A4O43826 429 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 PPP1R11O60927 126 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-218ENST00000439806 CCNE1P24864 410 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 CHRNA5P30532 468 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 HOXA7P31268 230 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-218ENST00000439806 CASQ1P31415 396 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 CASP14P31944 242 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 SLC1A4P43007 532 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 UBXN1Q04323 297 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 GRB10Q13322 594 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 AOC3Q16853 763 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 GLIPR1L2Q4G1C9 344 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 KRT79Q5XKE5 535 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 CC2D2BQ6DHV5 1058 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 TRIM65Q6PJ69 517 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 TOGARAM2Q6ZUX3 1019 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 SNX29Q8TEQ0 813 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 P2RX5Q93086 422 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 NUP88Q99567 741 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-218ENST00000439806 ARID3AQ99856 593 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 SRRTQ9BXP5 876 aaKnown RBP11.69□□□□□ -0.54
CPNE1-218ENST00000439806 DNAJC18Q9H819 358 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 L2HGDHQ9H9P8 463 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 TMOD2Q9NZR1 351 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 FAM198AQ9UFP1 575 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 DDX25Q9UHL0 483 aaKnown RBP11.69□□□□□ -0.54
CPNE1-218ENST00000439806 SERPINA10Q9UK55 444 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 PCDHAC2Q9Y5I4 1007 aa11.69□□□□□ -0.54
CPNE1-218ENST00000439806 LRRC10BA6NIK2 292 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 SOWAHDA6NJG2 315 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 LGALS16A8MUM7 142 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 PPIP5K2O43314 1243 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 ENTPD3O75355 529 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 URI1O94763 535 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-218ENST00000439806 RXRBP28702 533 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 CLK2P49760 499 aaKnown RBP11.68□□□□□ -0.54
CPNE1-218ENST00000439806 GNG11P61952 73 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 ICA1Q05084 483 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 PDIA5Q14554 519 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 MCM6Q14566 821 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 SEPT2Q15019 361 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 CDC37Q16543 378 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-218ENST00000439806 ABCB5Q2M3G0 1257 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 QRICH1Q2TAL8 776 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 PPP4R3AQ6IN85 833 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 MNS1Q8NEH6 495 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 LRRC15Q8TF66 581 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 LARP4BQ92615 738 aaKnown RBP11.68□□□□□ -0.54
CPNE1-218ENST00000439806 MKL1Q969V6 931 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 PNMA5Q96PV4 448 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 DESI2Q9BSY9 194 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 MMTAG2Q9BU76 263 aaKnown RBP11.68□□□□□ -0.54
CPNE1-218ENST00000439806 CCDC94Q9BW85 323 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-218ENST00000439806 PSTPIP2Q9H939 334 aa11.68□□□□□ -0.54
CPNE1-218ENST00000439806 COL2A1P02458 1487 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-218ENST00000439806 KDM3AQ9Y4C1 1321 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 PVALEFA0A1B0GWK0 134 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 POTEMA6NI47 508 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 GDF11O95390 407 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 GYPCP04921 128 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 SLURP2P0DP57 97 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 MTIF2P46199 727 aaKnown RBP11.67□□□□□ -0.54
CPNE1-218ENST00000439806 IKQ13123 557 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-218ENST00000439806 RBM26Q5T8P6 1007 aaKnown RBP11.67□□□□□ -0.54
CPNE1-218ENST00000439806 MCTP2Q6DN12 878 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 TTI2Q6NXR4 508 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 TATDN1Q6P1N9 297 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 RAD9BQ6WBX8 426 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 UNC13DQ70J99 1090 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 TMTC1Q8IUR5 882 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 CSGALNACT2Q8N6G5 542 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 MB21D1Q8N884 522 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 RAD54LQ92698 747 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 ANO3Q9BYT9 981 aa11.67□□□□□ -0.54
CPNE1-218ENST00000439806 TDRD3Q9H7E2 651 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms