RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 GOLGA5Q8TBA6 731 aa17.17■□□□□ 0.34
APP-208ENST00000439274 NOC3LQ8WTT2 800 aaKnown RBP17.17■□□□□ 0.34
APP-208ENST00000439274 IRS2Q9Y4H2 1338 aa17.17■□□□□ 0.34
APP-208ENST00000439274 MAST2Q6P0Q8 1798 aa17.17■□□□□ 0.34
APP-208ENST00000439274 LAD1O00515 517 aa17.17■□□□□ 0.34
APP-208ENST00000439274 ZNF263O14978 683 aa17.17■□□□□ 0.34
APP-208ENST00000439274 RASA1P20936 1047 aa17.17■□□□□ 0.34
APP-208ENST00000439274 ZBED6P86452 979 aa17.17■□□□□ 0.34
APP-208ENST00000439274 SPTY2D1Q68D10 685 aaPredicted RBP17.17■□□□□ 0.34
APP-208ENST00000439274 USP17L2Q6R6M4 530 aa17.17■□□□□ 0.34
APP-208ENST00000439274 KIAA0895Q8NCT3 520 aa17.17■□□□□ 0.34
APP-208ENST00000439274 SLC39A2Q9NP94 309 aa17.17■□□□□ 0.34
APP-208ENST00000439274 LCMT1Q9UIC8 334 aa17.17■□□□□ 0.34
APP-208ENST00000439274 SMCO2A6NFE2 343 aa17.16■□□□□ 0.34
APP-208ENST00000439274 GALNT17Q6IS24 598 aa17.16■□□□□ 0.34
APP-208ENST00000439274 CAGE1Q8TC20 777 aa17.16■□□□□ 0.34
APP-208ENST00000439274 MMTAG2Q9BU76 263 aaKnown RBP17.16■□□□□ 0.34
APP-208ENST00000439274 ZMYND12Q9H0C1 365 aa17.16■□□□□ 0.34
APP-208ENST00000439274 SEMA6BQ9H3T3 888 aa17.16■□□□□ 0.34
APP-208ENST00000439274 TMEM51Q9NW97 253 aa17.16■□□□□ 0.34
APP-208ENST00000439274 MYH1P12882 1939 aa17.16■□□□□ 0.34
APP-208ENST00000439274 BICDL2A1A5D9 508 aa17.16■□□□□ 0.34
APP-208ENST00000439274 EIF3CLB5ME19 914 aaKnown RBP17.16■□□□□ 0.34
APP-208ENST00000439274 TUBBP07437 444 aa17.16■□□□□ 0.34
APP-208ENST00000439274 IDEP14735 1019 aa17.16■□□□□ 0.34
APP-208ENST00000439274 ERCC3P19447 782 aa17.16■□□□□ 0.34
APP-208ENST00000439274 TM4SF1P30408 202 aa17.16■□□□□ 0.34
APP-208ENST00000439274 FAM71BQ8TC56 605 aa17.16■□□□□ 0.34
APP-208ENST00000439274 EIF3CQ99613 913 aaKnown RBP17.16■□□□□ 0.34
APP-208ENST00000439274 C7orf25Q9BPX7 421 aa17.16■□□□□ 0.34
APP-208ENST00000439274 ANKIB1Q9P2G1 1089 aa17.16■□□□□ 0.34
APP-208ENST00000439274 LRWD1Q9UFC0 647 aa17.16■□□□□ 0.34
APP-208ENST00000439274 EPHB6O15197 1021 aa17.15■□□□□ 0.34
APP-208ENST00000439274 IPO7O95373 1038 aaKnown RBP17.15■□□□□ 0.34
APP-208ENST00000439274 MYBL2P10244 700 aa17.15■□□□□ 0.34
APP-208ENST00000439274 C2orf54Q08AI8 447 aa17.15■□□□□ 0.34
APP-208ENST00000439274 NONOQ15233 471 aaKnown RBP eCLIP17.15■□□□□ 0.34
APP-208ENST00000439274 FOXR1Q6PIV2 292 aa17.15■□□□□ 0.34
APP-208ENST00000439274 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
APP-208ENST00000439274 NUP58Q9BVL2 599 aa17.15■□□□□ 0.34
APP-208ENST00000439274 JADE2Q9NQC1 790 aa17.15■□□□□ 0.34
APP-208ENST00000439274 TMEM260Q9NX78 707 aa17.15■□□□□ 0.34
APP-208ENST00000439274 BIN2Q9UBW5 565 aaPredicted RBP17.15■□□□□ 0.34
APP-208ENST00000439274 ROBO3Q96MS0 1386 aa17.15■□□□□ 0.34
APP-208ENST00000439274 LY75O60449 1722 aa17.15■□□□□ 0.34
APP-208ENST00000439274 A0A0U1RQG5 324 aaPredicted RBP17.15■□□□□ 0.34
APP-208ENST00000439274 EHBP1Q8NDI1 1231 aa17.15■□□□□ 0.34
APP-208ENST00000439274 TBCKQ8TEA7 893 aa17.15■□□□□ 0.34
APP-208ENST00000439274 RIN2Q8WYP3 895 aaPredicted RBP17.15■□□□□ 0.34
APP-208ENST00000439274 CCDC47Q96A33 483 aaKnown RBP17.15■□□□□ 0.34
APP-208ENST00000439274 AK8Q96MA6 479 aa17.15■□□□□ 0.34
APP-208ENST00000439274 DRC1Q96MC2 740 aa17.15■□□□□ 0.34
APP-208ENST00000439274 NYXQ9GZU5 481 aa17.15■□□□□ 0.34
APP-208ENST00000439274 CUEDC2Q9H467 287 aa17.15■□□□□ 0.34
APP-208ENST00000439274 FAM204AQ9H8W3 233 aa17.15■□□□□ 0.34
APP-208ENST00000439274 SYF2O95926 243 aaKnown RBP17.14■□□□□ 0.33
APP-208ENST00000439274 TXKP42681 527 aa17.14■□□□□ 0.33
APP-208ENST00000439274 ZNF662Q6ZS27 426 aa17.14■□□□□ 0.33
APP-208ENST00000439274 KRT25Q7Z3Z0 450 aa17.14■□□□□ 0.33
APP-208ENST00000439274 NEK8Q86SG6 692 aa17.14■□□□□ 0.33
APP-208ENST00000439274 AMOTL1Q8IY63 956 aa17.14■□□□□ 0.33
APP-208ENST00000439274 CCDC170Q8IYT3 715 aa17.14■□□□□ 0.33
APP-208ENST00000439274 RETREG2Q8NC44 543 aa17.14■□□□□ 0.33
APP-208ENST00000439274 ONECUT3O60422 494 aaPredicted RBP17.14■□□□□ 0.33
APP-208ENST00000439274 RNF40O75150 1001 aa17.14■□□□□ 0.33
APP-208ENST00000439274 LEKR1Q6ZMV7 388 aa17.14■□□□□ 0.33
APP-208ENST00000439274 AMIGO3Q86WK7 504 aa17.14■□□□□ 0.33
APP-208ENST00000439274 FAM114A1Q8IWE2 563 aa17.14■□□□□ 0.33
APP-208ENST00000439274 ZSCAN29Q8IWY8 852 aaPredicted RBP17.14■□□□□ 0.33
APP-208ENST00000439274 PIGSQ96S52 555 aa17.14■□□□□ 0.33
APP-208ENST00000439274 MLXIPQ9HAP2 919 aa17.14■□□□□ 0.33
APP-208ENST00000439274 MAGEF1Q9HAY2 307 aa17.14■□□□□ 0.33
APP-208ENST00000439274 FAM207AQ9NSI2 230 aaPredicted RBP17.14■□□□□ 0.33
APP-208ENST00000439274 HPCAL4Q9UM19 191 aa17.14■□□□□ 0.33
APP-208ENST00000439274 VAV2P52735 878 aa17.13■□□□□ 0.33
APP-208ENST00000439274 CKAP4Q07065 602 aaKnown RBP17.13■□□□□ 0.33
APP-208ENST00000439274 KIF5AQ12840 1032 aa17.13■□□□□ 0.33
APP-208ENST00000439274 NFIXQ14938 502 aa17.13■□□□□ 0.33
APP-208ENST00000439274 CCDC96Q2M329 555 aa17.13■□□□□ 0.33
APP-208ENST00000439274 SECISBP2LQ93073 1101 aaKnown RBP17.13■□□□□ 0.33
APP-208ENST00000439274 CCDC42Q96M95 316 aa17.13■□□□□ 0.33
APP-208ENST00000439274 PURBQ96QR8 312 aaKnown RBP17.13■□□□□ 0.33
APP-208ENST00000439274 ERGIC2Q96RQ1 377 aa17.13■□□□□ 0.33
APP-208ENST00000439274 EYA3Q99504 573 aa17.13■□□□□ 0.33
APP-208ENST00000439274 UBA5Q9GZZ9 404 aa17.13■□□□□ 0.33
APP-208ENST00000439274 NARFQ9UHQ1 456 aa17.13■□□□□ 0.33
APP-208ENST00000439274 CAPN6Q9Y6Q1 641 aa17.13■□□□□ 0.33
APP-208ENST00000439274 BAG3O95817 575 aa17.13■□□□□ 0.33
APP-208ENST00000439274 MRPS25P82663 173 aaKnown RBP17.13■□□□□ 0.33
APP-208ENST00000439274 ATP2B2Q01814 1243 aa17.13■□□□□ 0.33
APP-208ENST00000439274 FKBP15Q5T1M5 1219 aa17.13■□□□□ 0.33
APP-208ENST00000439274 DYMQ7RTS9 669 aa17.13■□□□□ 0.33
APP-208ENST00000439274 C2CD5Q86YS7 1000 aa17.13■□□□□ 0.33
APP-208ENST00000439274 WDR66Q8TBY9 1149 aa17.13■□□□□ 0.33
APP-208ENST00000439274 SPZ1Q9BXG8 430 aa17.13■□□□□ 0.33
APP-208ENST00000439274 C6orf50Q9HD87 102 aa17.13■□□□□ 0.33
APP-208ENST00000439274 ARHGAP20Q9P2F6 1191 aa17.13■□□□□ 0.33
APP-208ENST00000439274 FEZ2Q9UHY8 353 aaPredicted RBP17.13■□□□□ 0.33
APP-208ENST00000439274 TRPC5Q9UL62 973 aaPredicted RBP17.13■□□□□ 0.33
APP-208ENST00000439274 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms