RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 THOC1Q96FV9 657 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 LACRTQ9GZZ8 138 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 NHEJ1Q9H9Q4 299 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 GOPCQ9HD26 462 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 SPATA31A1Q5TZJ5 1347 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 UBN2Q6ZU65 1347 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 RTL9Q8NET4 1388 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 F8W031 263 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 GCOM1H8Y6P7 765 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 PSMD14O00487 310 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 PRKAB2O43741 272 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 MMP1P03956 469 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 MYZAPP0CAP1 466 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 TSPY3P0CV98 308 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 TSPY8P0CW00 308 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 AMPD2Q01433 879 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 CLEC4GQ6UXB4 293 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 SPATA4Q8NEY3 305 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 SELENOSQ9BQE4 189 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 EPN3Q9H201 632 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 FAM207AQ9NSI2 230 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 RMND1Q9NWS8 449 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 HYOU1Q9Y4L1 999 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 SRPRBQ9Y5M8 271 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 RGPD1P0DJD0 1748 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 TLDC2A0PJX2 215 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 FAM205CA6NFA0 338 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 USP17L12C9JPN9 530 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 USP17L21D6R901 530 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 SH2B2O14492 632 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 UFL1O94874 794 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 SLC8A1P32418 973 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 MAGEA1P43355 309 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 MYO1EQ12965 1108 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 AP1ARQ63HQ0 302 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 EMBQ6PCB8 327 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 ZNF34Q8IZ26 560 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 CSGALNACT2Q8N6G5 542 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 TSEN2Q8NCE0 465 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 STRBPQ96SI9 672 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 KRT12Q99456 494 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 CCDC194A0A1B0GVG4 234 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 ACTN4O43707 911 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 DEXIO95424 95 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 FAM196AQ6ZSG2 479 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 SMIM5Q71RC9 77 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 TBC1D10CQ8IV04 446 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 SPDL1Q96EA4 605 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 NOC4LQ9BVI4 516 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 TSGA10Q9BZW7 698 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 CPSF2Q9P2I0 782 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 MPHOSPH10O00566 681 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 PPP1R12AO14974 1030 aaPredicted RBP8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 CALM1P0DP23 149 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 CALM2P0DP24 149 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 CALM3P0DP25 149 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 KRT2P35908 639 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 MDM2Q00987 491 aaPredicted RBP8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 ITPK1Q13572 414 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 TTMPQ5BVD1 217 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 LCORLQ8N3X6 602 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 MED15Q96RN5 788 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 ZC3H12CQ9C0D7 883 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 VAT1LQ9HCJ6 419 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 SPATS2LQ9NUQ6 558 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 SEC63Q9UGP8 760 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 JCADQ9P266 1359 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 ROBO1Q9Y6N7 1651 aa8.19□□□□□ -1.1
SYNPO2-203ENST00000434046 TMCO5BA8MYB1 307 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 RIMBP2O15034 1052 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 SHOX2O60902 331 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 TCP1P17987 556 aaKnown RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 HERVK_113P62684 666 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 CUL4BQ13620 913 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 CFAP221Q4G0U5 840 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 CYB5D1Q6P9G0 228 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 ZNF654Q8IZM8 581 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 CRACR2BQ8N4Y2 399 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 MB21D1Q8N884 522 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 WDR66Q8TBY9 1149 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 MYCBPAPQ8TBZ2 947 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 AGPAT5Q9NUQ2 364 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 MED1Q15648 1581 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 ENO4A6NNW6 628 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 FSBPO95073 299 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 CTNNA1P35221 906 aaKnown RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 UBA7P41226 1012 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 CARSP49589 748 aaKnown RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 SMTNP53814 917 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 PTGDRQ13258 359 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 PTGISQ16647 500 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 KRT71Q3SY84 523 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 GKAP1Q5VSY0 366 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 LRP10Q7Z4F1 713 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 FNBP4Q8N3X1 1017 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 DYDC1Q8WWB3 177 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 MS4A14Q96JA4 679 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 VCPKMTQ9H867 229 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms